mRNA_C-australica_Contig_10114.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A2E9HUZ6_9RHOB (OmpR/PhoB-type domain-containing protein n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A2E9HUZ6_9RHOB) HSP 1 Score: 544 bits (1401), Expect = 2.780e-191 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRKA 837 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRKA Sbjct: 227 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRKA 505
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A238KIQ5_9RHOB (Transcriptional regulator HilA n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KIQ5_9RHOB) HSP 1 Score: 471 bits (1212), Expect = 3.880e-163 Identity = 238/278 (85.61%), Postives = 258/278 (92.81%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEAE+GHTLWRDRFDG ASEIF+LQD+VAE VAAALEP+LIWAEAARA+AKPT SLAAYDLCLRAAPLVYRQNTL S+ EGLDLL+QALALDP YL AKAL+CYAHTGAVATRWWTFEQA AALPLAREVLD NP+DPLALAY GH+IAYVG ETRRGLTALQRAKVLNPNSATVAMLLGW++NY SENEAAIAELRRARRISPLHP IGVI++GI NALFQ+G I+ AAAQ+EQAL+E+PEFATIHLGLM YWALGRKE+SARMAE RRK Sbjct: 189 IFTQLVEAESGHTLWRDRFDGLASEIFDLQDKVAERVAAALEPKLIWAEAARARAKPTESLAAYDLCLRAAPLVYRQNTLHSVMEGLDLLKQALALDPEYLMAKALVCYAHTGAVATRWWTFEQAAAALPLAREVLDANPDDPLALAYAGHHIAYVGRETRRGLTALQRAKVLNPNSATVAMLLGWIYNYQSENEAAIAELRRARRISPLHPQIGVITSGIANALFQLGDIEGAAAQFEQALTEFPEFATIHLGLMGAYWALGRKEDSARMAEAFRRK 466
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A5F1P4B3_9RHOB (Adenylate cyclase n=2 Tax=Tabrizicola TaxID=1443919 RepID=A0A5F1P4B3_9RHOB) HSP 1 Score: 414 bits (1065), Expect = 8.670e-141 Identity = 209/278 (75.18%), Postives = 235/278 (84.53%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEA TGHTLW+DRFDG+ASEIF+LQDRVAEHVA ALEP+LI EAARA+AKPT +LAAYDLCLRAAPLV+RQN L L EG++LLR AL +DPAY+ AKALICYAHTGA ATRWW+FE+A ALPLAREVLD NP+DPLALAY GHY+AY+G R GLTAL+RA LNPNSATVAMLLGWVHNY+S+N+AAI +L+RA RISPLHP IGV+SAGIGNAL Q G A YEQAL+EYPEFAT LGLM YWALGR E+SARMA+ R K Sbjct: 193 IFTQLVEAATGHTLWQDRFDGRASEIFDLQDRVAEHVAGALEPKLILTEAARARAKPTDNLAAYDLCLRAAPLVWRQNALPQLEEGIELLRHALEMDPAYVYAKALICYAHTGAFATRWWSFERASEALPLAREVLDANPDDPLALAYAGHYLAYIGSAHREGLTALKRAAFLNPNSATVAMLLGWVHNYMSQNDAAIEQLQRAMRISPLHPHIGVMSAGIGNALLQKGDPQAAVTYYEQALTEYPEFATTQLGLMGCYWALGRVEDSARMADWFRAK 470
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: UPI000A1EFE0C (winged helix-turn-helix domain-containing protein n=1 Tax=Marivita geojedonensis TaxID=1123756 RepID=UPI000A1EFE0C) HSP 1 Score: 394 bits (1013), Expect = 6.490e-133 Identity = 196/278 (70.50%), Postives = 230/278 (82.73%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEA TG +W DRFDG + +IF LQD VAE VAAA+EP+LIWAEAARAQAKPT +L AYDLC++AAPLVYRQN+L +L +GL+LLRQAL LD Y AKALICYAHTGA A RWW FEQARAALPLA EVLD+NP+DPLAL Y GHYIAY+G +T+ GLTAL+RA LNPNSA + MLLGWV+NY+ +++ AI LRRA RISPLHP IG++++GIGNALFQ G+I EA+ YEQAL+EYPEFATI LGLM YW LG E+SA+MAE R+K Sbjct: 192 IFTQLVEARTGRMIWHDRFDGSSDDIFNLQDTVAESVAAAIEPKLIWAEAARAQAKPTDNLKAYDLCMKAAPLVYRQNSLANLEDGLELLRQALELDANYTYAKALICYAHTGAFAARWWPFEQARAALPLAHEVLDSNPDDPLALCYVGHYIAYIGHDTKTGLTALKRAHSLNPNSANIEMLLGWVYNYIDQSDLAIEHLRRAIRISPLHPQIGIMTSGIGNALFQKGEIPEASRYYEQALTEYPEFATIQLGLMGCYWRLGELEKSAKMAEWFRQK 469
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A316KSH9_9RHOB (OmpR/PhoB-type domain-containing protein n=1 Tax=Marivita sp. XM-24bin2 TaxID=2133951 RepID=A0A316KSH9_9RHOB) HSP 1 Score: 383 bits (983), Expect = 2.250e-128 Identity = 191/278 (68.71%), Postives = 226/278 (81.29%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEA+T +W DRFDG + +IF+LQD VAE VAAA+EP+LIWAEAARAQAKPT +L AYDLC++AAPLVYRQN L++L +GL LLR+AL LDP Y AKALICYAHTGA A RWW FEQA+AALPLA EVLD+N +DPLAL Y GHYIAY+G +T GLTAL+RA LNPNSA + MLLGWV+NY+ +++ AI LRRA RISPLHP +G++++GIGNALFQ G I EA YEQAL+EYPEFATI LGLM YW LG E+SA+MA R+K Sbjct: 192 IFTQLVEAKTSRMIWHDRFDGSSEDIFDLQDTVAESVAAAIEPKLIWAEAARAQAKPTDNLKAYDLCMKAAPLVYRQNALENLEDGLTLLRKALVLDPNYTYAKALICYAHTGAFAARWWPFEQAQAALPLAHEVLDSNSDDPLALCYVGHYIAYMGHDTNTGLTALKRAHSLNPNSANIEMLLGWVYNYIDQSDLAIEHLRRAIRISPLHPQVGIMTSGIGNALFQKGDIAEATKYYEQALTEYPEFATIQLGLMGCYWRLGDFEKSAQMAGWFRQK 469
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A8J7WEU7_9RHOB (Winged helix-turn-helix domain-containing protein n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WEU7_9RHOB) HSP 1 Score: 375 bits (964), Expect = 1.480e-125 Identity = 188/278 (67.63%), Postives = 223/278 (80.22%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 I TQLVE ETGHTLWR +FDG + ++F LQD+VAE VAAALEP+LIWAEAAR + KPT SL AYDLCLRAAP+VY QNTLD+L EGL LL +A+ALDP Y QA+ALICYAHTGA ATRWW+ E+A AA+PLAR +LD+N +DPL LAY GHYIAY+GGE RGLTALQRA LNPNS TV+MLLGWV+NYL + AI +L+RARRISPLHP IG+I++GIG A G + A EQAL+E+PEFATI L LM YWALGR++++ RMA+ R K Sbjct: 189 ISTQLVECETGHTLWRGKFDGASDDLFALQDQVAESVAAALEPKLIWAEAARTRRKPTESLDAYDLCLRAAPMVYVQNTLDNLEEGLALLHRAVALDPDYAQARALICYAHTGAFATRWWSHEKASAAIPLARALLDSNTDDPLVLAYAGHYIAYLGGEPGRGLTALQRAAALNPNSGTVSMLLGWVYNYLDRPDEAIEQLQRARRISPLHPQIGIITSGIGQAQIIAGNYETAVRHLEQALTEFPEFATIQLSLMGCYWALGRRDDAERMADWFRAK 466
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A1M5W6X9_9RHOB (TolB amino-terminal domain-containing protein n=1 Tax=Marivita hallyeonensis TaxID=996342 RepID=A0A1M5W6X9_9RHOB) HSP 1 Score: 359 bits (921), Expect = 5.130e-119 Identity = 173/278 (62.23%), Postives = 221/278 (79.50%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEA+T +W +RFDG +IF+LQDRVAE VA A+EP++IWAEAAR QAKPT +LAAYDLC++AAPLV RQN+LD+L EG+ LL QALALDP +++AK L CYAHTG+ A RWW+FE+ARAALPLA ++LD +DP ALA GHYIAY+G + RGL A++RA LNPNSAT+++LLGWV+NYLS+++AAI L+RA R+SPLHP+IG+ ++GI NA FQ ++ A YE+AL +YPEFATI LGL+ YW +G E+SA+MA R K Sbjct: 191 IFTQLVEAKTARMIWHERFDGTTEDIFDLQDRVAERVAGAIEPKMIWAEAARIQAKPTHNLAAYDLCMKAAPLVMRQNSLDNLEEGIGLLNQALALDPGFVRAKGLFCYAHTGSFAARWWSFEKARAALPLAEKLLDEGTDDPFALATAGHYIAYIGQDPHRGLIAVRRANALNPNSATISLLLGWVYNYLSDDDAAIEHLKRALRLSPLHPNIGITTSGIANAYFQKQDLETAIRYYEEALMQYPEFATIQLGLIGCYWKVGEHEKSAQMATWFRNK 468
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A1B6YN95_9RHOB (OmpR/PhoB-type domain-containing protein n=1 Tax=Jannaschia sp. EhC01 TaxID=1849359 RepID=A0A1B6YN95_9RHOB) HSP 1 Score: 346 bits (888), Expect = 4.120e-114 Identity = 170/275 (61.82%), Postives = 214/275 (77.82%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEIL 825 IFTQLVEAETG +W+DRFDG+ SEIF+LQDR+AEHVA ALEP+LIW EAARA AKPT SL+AY+LCL+AAP+VY Q++ DSL GL LR+AL LDP Y+QAKAL CYAHT A A+RWWT E A+ ALP AR+VLD++ +D LAL Y GHY+AY+G + + GL AL+RA +LNPNSATVAMLLGWVH YL ENE A+ LRRA RISPLHP VI +G+G+AL Q G +++A +E+A + YPEF + L+ +YWAL R E++ + + + Sbjct: 185 IFTQLVEAETGRMIWQDRFDGEMSEIFDLQDRLAEHVAGALEPKLIWTEAARASAKPTDSLSAYELCLKAAPVVYLQHSRDSLENGLVFLRKALELDPNYMQAKALYCYAHTSAFASRWWTLETAQNALPYARDVLDSDTDDALALCYAGHYMAYIGRKYQEGLMALKRAAILNPNSATVAMLLGWVHVYLDENEPAVMHLRRALRISPLHPHTAVIKSGLGSALVQSGALEDAVPYFEEAQAAYPEFGSNAFELLGVYWALERPEDARALVQFV 459
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A1X4NY51_9RHOB (OmpR/PhoB-type domain-containing protein n=1 Tax=Marivita cryptomonadis TaxID=505252 RepID=A0A1X4NY51_9RHOB) HSP 1 Score: 343 bits (881), Expect = 5.460e-113 Identity = 172/278 (61.87%), Postives = 210/278 (75.54%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEA+T +W DRFDG +IF+LQD VA VA ALEP+LIWAEAAR +KPT +L AYDLC++AAPLV RQNTL SL EGL+LL ++LALDP Y++AK L CYAHTG+ A RWWTFEQA+A LP+AREVLD+ +DP ALA GH+IAY+G E GL ++ RA LNPNSAT+A+ LGWVHNYLS ++ AI L RA RISPLHP+IGV + GI NA FQ ++ A YE+AL++YPEFA+ LGLM Y G+ E+SA+MA R K Sbjct: 190 IFTQLVEAKTARMIWHDRFDGSTEDIFDLQDTVAACVAGALEPKLIWAEAARLHSKPTDNLQAYDLCMKAAPLVMRQNTLSSLEEGLELLNRSLALDPDYVRAKGLYCYAHTGSFAARWWTFEQAQAGLPMAREVLDSGTDDPFALAAAGHHIAYIGQEPETGLISVTRANALNPNSATIALFLGWVHNYLSNDDQAIEHLERAIRISPLHPNIGVTTCGIANAYFQKQDLETAIRYYEEALTQYPEFASTQLGLMGCYLKAGKLEKSAQMATWFRNK 467
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: UPI001FF34AF2 (winged helix-turn-helix domain-containing protein n=1 Tax=Marivita sp. S6314 TaxID=2926406 RepID=UPI001FF34AF2) HSP 1 Score: 343 bits (881), Expect = 5.460e-113 Identity = 171/278 (61.51%), Postives = 215/278 (77.34%), Query Frame = 1 Query: 1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834 IFTQLVEA+T +W++RFDG +IF+LQD VAE VA A+EP+LIWAEAARAQ KPT SLAAYDLC+RA PLV RQNTL L EG+ LL QALALDP + +AK L C+AHTG+ ATRWW FE+A+AALP+A+ +LD+ ED ALA GHYIAY+G + +GL A++RA LNPNSATV +LLGWV+NYLSE++ AI L+RA RISP+HP+IGV + GI NA FQ + A + YE+A+++YPEFA+I LG++ YW LG E+SA+MA R K Sbjct: 190 IFTQLVEAKTARMIWQERFDGTTEDIFDLQDTVAESVAGAIEPKLIWAEAARAQHKPTESLAAYDLCMRATPLVMRQNTLSDLEEGMALLDQALALDPRFDRAKGLYCFAHTGSFATRWWPFEKAQAALPVAQSLLDSGTEDAFALAAAGHYIAYIGQDLHKGLIAVKRAYALNPNSATVCLLLGWVYNYLSEDDDAIMHLQRAARISPVHPNIGVTTCGIANAFFQKQDLKRAISYYEEAITQYPEFASIQLGMIGCYWKLGDLEKSAQMAAWFRNK 467 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10114.1.1 >prot_C-australica_Contig_10114.1.1 ID=prot_C-australica_Contig_10114.1.1|Name=mRNA_C-australica_Contig_10114.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=279bp IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAback to top mRNA from alignment at C-australica_Contig_10114:3..839- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10114.1.1 ID=mRNA_C-australica_Contig_10114.1.1|Name=mRNA_C-australica_Contig_10114.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=837bp|location=Sequence derived from alignment at C-australica_Contig_10114:3..839- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10114:3..839- >mRNA_C-australica_Contig_10114.1.1 ID=mRNA_C-australica_Contig_10114.1.1|Name=mRNA_C-australica_Contig_10114.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=837bp|location=Sequence derived from alignment at C-australica_Contig_10114:3..839- (Chrysoparadoxa australica CS_1217)back to top |