mRNA_C-australica_Contig_1011.5.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.860e-55 Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 3 Query: 168 FSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFP-GENTTTEFMCRKIHEGIARE-CRNGESM--EGFNGEVCVKLWESHKAWACYKATV 551 FSLG+RDSIMIAHSFKGE+FGPAQ +HGATYTVDV F S L P+ NWV+DIG A ALS++LS YNF+NLD++FP GENTTTEFMCR IH +A C N E F G +CVKLWESHKAWACY+A V Sbjct: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI) HSP 1 Score: 179 bits (454), Expect = 9.520e-52 Identity = 79/129 (61.24%), Postives = 102/129 (79.07%), Query Frame = 3 Query: 165 GFSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 G+SLG+RDSIMIAHSF+G +FGPAQ++HGATYTVD EF + L + NWVVDIGAA + L+ VLS YNF+NL+E+FPG+NTTTEFMC+ I + +A +C + F+G +C+KLWESHKAW CY+ V Sbjct: 32 GYSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCG-----KDFHGTLCIKLWESHKAWGCYEGDV 155
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.810e-51 Identity = 82/131 (62.60%), Postives = 100/131 (76.34%), Query Frame = 3 Query: 159 TAGFSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 +A ++LG+RDSIMIAHSFKG FGPAQ++HGATYT DVEF P L P +NWV+DIG A + LS VL+ YNF+NL+E+FP ENTTTEFMCR+I +G+AR C F G + VKLWESHKAWA Y+ V Sbjct: 7 SALYTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGR-----FCGTIRVKLWESHKAWASYEGAV 132
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK) HSP 1 Score: 176 bits (446), Expect = 1.020e-50 Identity = 88/144 (61.11%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 120 LLGLLVALFFEATTAGFSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 L L++A F A FSLGVRDSIMIAHSFKGE FGPAQ++HGATYTVDVEF + L + NWVVDIG A + LS VL YNF+NL+ELFP +NTTTEFMC+ I + IA +E F G +CVKL ESHKAWA Y V Sbjct: 13 LAALVLAFFASLAHAKFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAA------CLENFKGSMCVKLHESHKAWASYTGDV 150
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.280e-50 Identity = 85/143 (59.44%), Postives = 106/143 (74.13%), Query Frame = 3 Query: 120 LLGLLVALFFEATT--AGFSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYK 542 ++G+L +F A G++LGV+DSIMIAHSF+GE FGPAQKLHGATYTVDVEF + LE + NWV+DIG A + L KVL+ YNF+NLDELFP +NTTTEFMC+ I + ++ E N F G + VKLWESHKAWA Y+ Sbjct: 12 IIGILCIMFTLAYAHKKGYTLGVKDSIMIAHSFQGEEFGPAQKLHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKVIFDDMSAELANK-----FKGSLSVKLWESHKAWASYQ 149
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC) HSP 1 Score: 169 bits (428), Expect = 1.710e-47 Identity = 79/124 (63.71%), Postives = 91/124 (73.39%), Query Frame = 3 Query: 168 FSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACY 539 +SLG+RDSIMIAHSF G+ FGPAQ +HGATYTVDVEF L P +NWV+DIG L KVL YNF+NL+ELFPGENTTTEFMC+KI EG+ E + F G + VKLWESH AWA Y Sbjct: 63 YSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKKIFEGLCVELKGK-----FKGSITVKLWESHSAWASY 181
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A7S2A892_TRICV (6-pyruvoyltetrahydropterin synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A892_TRICV) HSP 1 Score: 163 bits (413), Expect = 2.480e-45 Identity = 86/146 (58.90%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 120 LLGLLVALFFEATTAGFSLGVRDSIMIAHSFKGE-RFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFP-GENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 LL LL+ A F+LGVRDS+MIAHSF G FGPA +HGATYT DVEF + L PE NWV+DIG A D L+ VLS YN +NLDE+FP GE TTTEFMCR IHE + R + E F GE+ VKLWESHKAW Y V Sbjct: 42 LLPLLLPAAVGADRLPFALGVRDSLMIAHSFHGHPSFGPAGGMHGATYTCDVEFRTSHLHPECNWVIDIGLASDVLTSVLSRYNMKNLDEVFPDGEMTTTEFMCRVIHEDLCRRLK--EEGAEFEGEIRVKLWESHKAWGSYVGEV 185
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A7S0FMK9_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMK9_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.410e-45 Identity = 89/150 (59.33%), Postives = 103/150 (68.67%), Query Frame = 3 Query: 129 LLVAL--FFEATTAG-----FSLGVRDSIMIAHSFKGE-RFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPG-ENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 LLVAL F A+ A F+LGVRDS+MIAHSF FGPA +HGATYT DVEFSS L NWV+DIG A D L+ VLS YN +NLDE+FPG E TTTEFMC+ IH+GIA+ R E + F GE+ VKLWESHKAWA + V Sbjct: 8 LLVALLAFASASIAAAERLPFTLGVRDSLMIAHSFHNHPSFGPAGGMHGATYTCDVEFSSANLVEGTNWVIDIGKASDILADVLSRYNLKNLDEVFPGGEMTTTEFMCKTIHDGIAQRIR--EDVGDFKGEIRVKLWESHKAWASFVGEV 155
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A7S0WCE1_9CRYP (6-pyruvoyltetrahydropterin synthase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCE1_9CRYP) HSP 1 Score: 162 bits (410), Expect = 7.560e-45 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 3 Query: 165 GFSLGVRDSIMIAHSFKGERFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGENTTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 G++LGVRDSIMIAHSFKG FGPAQ +HGATYTVD+E S L ++NWVVDIG L +VL YN++NLDE+FPG NTTTEFM +KIHEG+A + G G + VKLWESH AWA Y + Sbjct: 64 GYTLGVRDSIMIAHSFKGPEFGPAQGMHGATYTVDLEVSVEKLADKLNWVVDIGVLLGILKEVLGVYNYKNLDEVFPGVNTTTEFMSQKIHEGVAAALKK----HGVVGSMSVKLWESHNAWATYSNKI 188
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Match: A0A7S2R056_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R056_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.480e-44 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 168 FSLGVRDSIMIAHSFKGE-RFGPAQKLHGATYTVDVEFSSPGLEPEVNWVVDIGAAGDALSKVLSAYNFENLDELFPGEN-TTTEFMCRKIHEGIARECRNGESMEGFNGEVCVKLWESHKAWACYKATV 551 F+LGVRDSIMIAHSF FGPA +HGATYT DVEF+ L+ + NWV+DIG A D LS++L+ YN +NLDE+F + TTTEFMCR+I +GIA + R E + F+G++CVKLWESHKAWA Y+ ++ Sbjct: 9 FTLGVRDSIMIAHSFHNHPSFGPAGGMHGATYTCDVEFACEELDSDANWVIDIGKASDILSEILAKYNLKNLDEIFGDDILTTTEFMCREICQGIAEKVR--EQVPDFHGDLCVKLWESHKAWASYQQSI 136 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1011.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1011.5.2 >prot_C-australica_Contig_1011.5.2 ID=prot_C-australica_Contig_1011.5.2|Name=mRNA_C-australica_Contig_1011.5.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=152bp MKGPHQLLLGLLVALFFEATTAGFSLGVRDSIMIAHSFKGERFGPAQKLHback to top mRNA from alignment at C-australica_Contig_1011:11412..12903- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1011.5.2 ID=mRNA_C-australica_Contig_1011.5.2|Name=mRNA_C-australica_Contig_1011.5.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1492bp|location=Sequence derived from alignment at C-australica_Contig_1011:11412..12903- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1011:11412..12903- >mRNA_C-australica_Contig_1011.5.2 ID=mRNA_C-australica_Contig_1011.5.2|Name=mRNA_C-australica_Contig_1011.5.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=456bp|location=Sequence derived from alignment at C-australica_Contig_1011:11412..12903- (Chrysoparadoxa australica CS_1217)back to top |