mRNA_C-australica_Contig_1011.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A835YJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ47_9STRA) HSP 1 Score: 298 bits (762), Expect = 9.340e-91 Identity = 140/193 (72.54%), Postives = 173/193 (89.64%), Query Frame = 1 Query: 1 CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKESLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSECFTAL 579 CELQ++C GL LRS+LIQPVQRVPRYKLLL+ELLKHTK++HPD+ N+++AL+EIT A++LNENARDHDRRQ+VLD+Q QFKE+ VTASRYLV+EG+L+KVCN GP+KYKFVLFNDM+LYGTETLRGMLLDKT ++Y+AHK IPL++CMVLDY+S VGFV+ N +GKSF+ LA + KQ WLD+FSECF +L Sbjct: 160 CELQEACRGLDLRSYLIQPVQRVPRYKLLLAELLKHTKETHPDYANISMALSEITVVATRLNENARDHDRRQKVLDVQEQFKENFVTASRYLVKEGSLRKVCNGGPRKYKFVLFNDMVLYGTETLRGMLLDKTRQRYKAHKKIPLDECMVLDYDSDVGFVLVNHAGKSFIVLADTARAKQEWLDAFSECFASL 352
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: D7FSM5_ECTSI (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM5_ECTSI) HSP 1 Score: 229 bits (584), Expect = 2.030e-66 Identity = 110/194 (56.70%), Postives = 143/194 (73.71%), Query Frame = 1 Query: 1 CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKESLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSECFTALK 582 CE QD+CHGL L+++LIQPVQRVPRY+LL+ +LLKHTK+SHPDW +LN AL +++ +KLNE ARD +R R L+LQ +F+E + S +LV+EG L KVCN GP++YKFVLF+ ML+YGTE L + +KY+ H IPL +C+VLDY SS F IA SGKSFVA+A S KQ+WLD+F E F +K Sbjct: 131 CEHQDACHGLDLKAYLIQPVQRVPRYRLLIIQLLKHTKESHPDWADLNAALETVSSTVTKLNEGARDKERFVRALELQYEFREDFLKPSSHLVKEGFLLKVCNGGPRRYKFVLFSHMLVYGTEASLRAKLQRDHRKYKVHGRIPLHECLVLDYGSSDSFAIARSSGKSFVAMAVSAEAKQAWLDAFEESFAGIK 324
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A836CFT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT7_9STRA) HSP 1 Score: 209 bits (532), Expect = 4.440e-59 Identity = 120/235 (51.06%), Postives = 146/235 (62.13%), Query Frame = 1 Query: 52 QPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKESLVTASRYLVQEGTLKKVCNN--------GPKKYKFVLFN-------------------------------------DMLLYGTETLRGMLLDKTIKKYRAHKMIPLED-------------CMVLDYESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSECFTALK 582 QPVQRVPRYKLLL+ELLKHTK++HPDWVN++ AL +IT A +LNENARDHDRRQRVLD+Q QF+ES VTASRYLV+EG L+KV P+KY+FV FN DM++YGTETLR ML K+ +Y+ HK IPLE CMVLDY+S VGFVI N +GKSF+ LA + KQ WLD+F+ECF +L+ Sbjct: 236 QPVQRVPRYKLLLAELLKHTKETHPDWVNISTALEQITRVAVRLNENARDHDRRQRVLDVQEQFRESFVTASRYLVKEGLLRKVXXXXXXXXXXXSPRKYRFVHFNVKLHMRLDNTPLLQXXXXXXXXXXXXXXXXXXXXXXXDMVIYGTETLRSMLDRKS--RYKTHKRIPLETRXXXXXXXXXXXXCMVLDYDSDVGFVIVNHAGKSFIVLADTARAKQEWLDAFTECFASLR 468
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: W7TL77_9STRA (Pleckstrin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL77_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.880e-40 Identity = 76/194 (39.18%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 1 CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKESLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSECFTALK 582 CELQ+ C GL LR++LI P+QR+PRYKLLL+ELLKHT + HPD+ +L A+ ++ +NE+ + ++R +V+++Q ++ +LVTASR +EG L KVC GPK +FVL ND+L+YG + +K H+ + L + V+D ++ I KSFV A ++K++W+ +F+ CF ++ Sbjct: 171 CELQEGCKGLNLRAYLIMPIQRIPRYKLLLTELLKHTPEEHPDFEDLEAAVKLVSGVVGAINEDIKRQEKRFKVIEIQERWDTNLVTASRKFEKEGMLVKVCRKGPKARQFVLLNDLLIYGARKIASS------EKCTLHRKVDLSELFVVDSGNAEKTFILATRAKSFVVQCADMSDKKTWMAAFAACFAEME 358
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A7S2W3R1_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W3R1_9STRA) HSP 1 Score: 130 bits (327), Expect = 9.950e-33 Identity = 75/197 (38.07%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 1 CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKES--LVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGT-ETLRGMLLDKTIKK---YRAHKMIPL---EDCMVLDYESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSE 564 C+ L SFLI PVQRVPRY+LL+ ELLKHT + HP++ ++ A ++++ A +N N RDH+RR VL +Q +F S LV+ R+ ++E TL+KVC PK ++FVLFND+L+YG+ ++ G +++T K Y+ H+ I L E C+ D + + KSF + + AE+ W+ E Sbjct: 145 CKALPESQSCSLDSFLILPVQRVPRYELLIKELLKHTDEDHPEYTIISSAYSKVSTVAKMINSNLRDHERRTAVLAVQEKFGNSVQLVSPQRWFIREATLRKVCKRKPKPFRFVLFNDVLIYGSLVSMSGFNVNRTTPKQQHYKYHRTIDLVNAEVCVCPDSPLGEPQFQISSTVKSFKVITCTEAERDQWVRDLEE 341
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A2R5G7Z0_9STRA (Rho guanine nucleotide exchange factor, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7Z0_9STRA) HSP 1 Score: 131 bits (329), Expect = 6.320e-32 Identity = 76/185 (41.08%), Postives = 111/185 (60.00%), Query Frame = 1 Query: 13 DSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKES--LVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSVG----FVIANPSGKSFVALAASPAEKQSWL 549 + C G L S+LI PVQRVPRY+LLL ELLK TK SHP++ + AL +++N A+ +N N RDH+RR VL +Q +F S LV+ R+L++E L+KVC K + FVLFND+L+YG+++ YR H+ I L E++ F + +PS KSF + +S E+ +W+ Sbjct: 213 EECAGCSLDSYLIMPVQRVPRYELLLKELLKQTKVSHPEYTEITTALRKVSNVATMINNNLRDHERRGAVLAVQNKFGSSIQLVSPQRWLIREALLRKVCKRKTKNFLFVLFNDVLIYGSQS------------YRHHRTIELCTAEASACEATAQGEPQFQVLSPS-KSFKVVVSSEQERDAWV 384
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A835Z6E2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E2_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.150e-30 Identity = 74/194 (38.14%), Postives = 111/194 (57.22%), Query Frame = 1 Query: 25 GLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKESLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSVGFVIANP---------SGKSFVALAASPAEKQSWLDSFSECFTAL 579 GL LR LI PVQR+PRY+LLL +++HTKD+ P L L +++ ++N++ +RR RVL LQ QF E V A+R LV++G L KVC GP++++FVLF+D+L+YG+ETL G ++Y+ ++ + L C V+D + V A + K FV A+ EK W+ + AL Sbjct: 387 GLQLRDLLIMPVQRIPRYRLLLETMVRHTKDADPLSRGLAENLAQMSTVVDQINQDVHKMERRNRVLALQYQFAEEWVAAARTLVKDGPLTKVCRGGPRRFQFVLFSDLLVYGSETLMGKW---GKRQYKMNRALELARCYVVDGLAPGAVVPAGAEEAAFMVLSADKCFVVQASDAVEKAEWVAALRGAMDAL 577
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A7S3LM97_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LM97_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.580e-28 Identity = 71/190 (37.37%), Postives = 112/190 (58.95%), Query Frame = 1 Query: 1 CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQFKE--SLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSE 564 C +D L+S+LI +QRVPRY+LLL L+++T+DS+PD NL A EI+ + +N+ +H+RR+ VL++Q +F +V R ++EG LKK C K+++FVLFND L+YG E ++ + ++ H++I L V + + F+IA+P KSF +A S E+ SW+ S E Sbjct: 141 CAARDESERGDLQSYLILGIQRVPRYRLLLKALIENTEDSNPDKGNLLEAYEEISKVTATINDGVENHERREEVLNIQNKFVGCGEIVKPHRVFIREGDLKKCCKRKTKRFRFVLFNDALIYG-EAVKS-------ETFKFHRLIELRSTKVAPLKDDLQFLIASPC-KSFRVMATSREERDSWVKSAEE 321
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A397TNA4_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TNA4_9GLOM) HSP 1 Score: 121 bits (304), Expect = 1.670e-28 Identity = 75/186 (40.32%), Postives = 107/186 (57.53%), Query Frame = 1 Query: 19 CHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVALTEITNAASKLNENARDHDRRQRVLDLQLQ---FKESLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTETLRGMLLDKTIKKYRAHKMIPLEDCMVLDYESSV-----GFVIANPSGKSFVALAASPAEKQSWLD 552 C GL L+++LI PVQR+PRYKLLL +LLK T +HPD++NL A I N A+ +NE R H+ +LD+Q F E L+ R ++ G +KK+C +K++F LF+D+L+Y R L+D T Y H+ LED VL E + GF I +P KSF + EK+SW++ Sbjct: 475 CKGLTLQAYLIMPVQRIPRYKLLLEDLLKKTVVTHPDYLNLKKAYQVIENVATFVNETIRQHEMFITMLDIQKSLTGFDEVLLVPGRTFIKRGIVKKICRRKHQKHEFFLFSDILIYA----RPSLMDDT---YTFHRKFSLEDVTVLVVEDTQKDVKNGFQIMSPQ-KSFTVYVDTQKEKESWIN 652
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Match: A0A7S1TVV6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV6_9STRA) HSP 1 Score: 120 bits (300), Expect = 5.060e-28 Identity = 73/197 (37.06%), Postives = 113/197 (57.36%), Query Frame = 1 Query: 1 CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNL-NVALTEITNAASKLNENARDHDRRQRVLDLQLQFK-ESLVTASRYLVQEGTLKKVCNNGPKKYKFVLFNDMLLYGTE--TLRGMLLDKTIKKYRAHKMIPLEDCMVLDY----ESSVGFVIANPSGKSFVALAASPAEKQSWLDSFSEC 567 CELQ +CH L FLIQPVQR+PRY+LLL ++LK T + + + L AL +I + +N +++ R++V L+ +F LVT SR V+EG L K+ GPKK++FVLFND+L+YGT+ R + L + ++ + + L++ V+D + + F + KSF+A A S E W+ + EC Sbjct: 139 CELQPTCHNKVLSDFLIQPVQRMPRYRLLLQQVLKATGNGYEEERELIRDALKKIEESTHTVNSQVHENEAREKVQQLKDEFGVPELVTPSRRFVKEGFLSKISRRGPKKFRFVLFNDLLIYGTQESAFRTLTLSRGNGTWKVNHWLELQNVAVVDKGVPTQQNGAFAVLTAE-KSFIAFADSTGEAAEWVSAVREC 334 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1011.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1011.1.1 >prot_C-australica_Contig_1011.1.1 ID=prot_C-australica_Contig_1011.1.1|Name=mRNA_C-australica_Contig_1011.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=194bp CELQDSCHGLGLRSFLIQPVQRVPRYKLLLSELLKHTKDSHPDWVNLNVAback to top mRNA from alignment at C-australica_Contig_1011:12..1754+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1011.1.1 ID=mRNA_C-australica_Contig_1011.1.1|Name=mRNA_C-australica_Contig_1011.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1743bp|location=Sequence derived from alignment at C-australica_Contig_1011:12..1754+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1011:12..1754+ >mRNA_C-australica_Contig_1011.1.1 ID=mRNA_C-australica_Contig_1011.1.1|Name=mRNA_C-australica_Contig_1011.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=582bp|location=Sequence derived from alignment at C-australica_Contig_1011:12..1754+ (Chrysoparadoxa australica CS_1217)back to top |