mRNA_C-australica_Contig_101.7.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A4P5YSZ9_9BACT (BPL_N domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5YSZ9_9BACT) HSP 1 Score: 124 bits (311), Expect = 8.740e-28 Identity = 89/260 (34.23%), Postives = 127/260 (48.85%), Query Frame = 3 Query: 42 PSLDDGGGTSLVCYRCSGAQLPVVLTAPHGGNAEF-------GHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIK------PGVG--EEEVSGYKGGHTVHRH---AGRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767 P + + + LP++LTAPHGG A G + RF + D T L E++ L+Q GK PY+V+ARFHR Y+DANR P + P T T+ YH +I + + A R R +++DIHGQAS P V GT++G T L + G ++ L+G + + P VG + E Y GGHTV RH +G IDA+QLE G+ R ++A +V +K+A AI Sbjct: 40 PDATNSQAVATAAMTVAAGGLPIILTAPHGGRAALPGVAERQGAGAARFNAK----------IDTNTDLLTEKLADALEQRLGKRPYVVIARFHRKYLDANRR---PEDAFESPAATA---TYEAYHAAIAAACQEVTA--RWGRGVVLDIHGQASQPGVVFRGTQNGKTV-AHLLQQSGRESVYGETSLFGQLARQGFAVFPAVGSSDPEEPSYSGGHTVGRHGSSSGGTIDALQLELGTKYRDAKALGDVADKLANAI 280
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A6C2YK43_9BACT (Uncharacterized protein n=1 Tax=Tuwongella immobilis TaxID=692036 RepID=A0A6C2YK43_9BACT) HSP 1 Score: 115 bits (288), Expect = 5.130e-26 Identity = 73/234 (31.20%), Postives = 120/234 (51.28%), Query Frame = 3 Query: 99 QLPVVLTAPHGGNAEFGHQSTRF-LPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREG-------EGFLWHLRQLYGGVIKPGVGEEEVSGYKGGHTVHR---HAGRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767 ++P++LTAPHGG E + R + G T D GT +L+ ++ +++ GK PY++ ARFHR +ID NR ++ E A+ + ++H S+ + ++ + QR LL+D+HGQ S ++ GT++G T + + R G E F L + +G + P +E +G+ GG+ V H G GIDA+QLE G+ R R EK+A ++ Sbjct: 44 EIPIILTAPHGGTLELPNVPERKGIGLEKGAKGFFTGRDTGTEELVADLSAAIEKRFGKKPYLIAARFHRKFIDPNRPPEIAYE------SPNAKPFYDQFHDSVADACKQVQG--KFQRGLLLDLHGQGSKRDTIFRGTQNGKTVKL-LIDRYGKKAQVGPESFFGFLAK-HGCTVYPTDDGKEQAGFTGGYIVQTYGSHTGYGIDAIQLECGADYRLKDVRKPAAEKIADSV 267
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A3N5WKQ0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WKQ0_9PROT) HSP 1 Score: 114 bits (284), Expect = 2.850e-25 Identity = 89/271 (32.84%), Postives = 125/271 (46.13%), Query Frame = 3 Query: 18 RNFLPLQLPSL-DDGGGTSLVCYRCSGAQLPVVLTAPHGGNAEFGH------QSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIKPGVG-----------EEEVSGYKGGHTVHR---HAGRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767 R L L L +L GG + +LPV++ APHGG A+ RF+ RPD T +L + I +L++LTG++PY+V+ARFHR +IDANR P E GC + YH + R V I+A + + +L DIHGQ+++ ++L GTR G T L R G + ++G G E Y GG+TV R H GIDA+QLEFG R + + A+AI Sbjct: 54 RVLLALWLAALLPAGGALARDLVHAEAGELPVIIAAPHGGRADVPGCEVRTATGKRFVNRPDH----------NTDRLAQVIAAELKRLTGQAPYLVIARFHRKFIDANRS---PEEAYGAEGCAADYDD---YHAVLRRNVDDIRA--KHPQAMLFDIHGQSAYRDAILRGTRHGETV-TRLLARAGAAAVTGPDSVFGRFAAMGYAIVPSNDTALTDRVEAKNYIGGYTVARYGSHRADGIDAMQLEFGRDFRNNDNVERTAQDAAQAI 305
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A142WPH4_9PLAN (BPL_N domain-containing protein n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WPH4_9PLAN) HSP 1 Score: 114 bits (286), Expect = 1.900e-24 Identity = 78/235 (33.19%), Postives = 118/235 (50.21%), Query Frame = 3 Query: 99 QLPVVLTAPHGGNAEFGHQSTRFLPRPDDMPG-VRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGF------LWHLRQLYGGVIKPGVGE-EEVSGYKGGHTVHRHAGR--GIDAVQLEFGSSLRASQARAEVGEKVAKAIYH 773 +LP+V++APHGGN E R PG T D GT +L + + ++ GK PY+V +R HR Y+D NR D E A + +YH +++ C R+++ R LL+D+HGQ S ++V GT++G T + R GE L L + G + P E E G+ GG+ V ++G G+DA+QLEFG+ R AR + +A+A +H Sbjct: 48 ELPIVISAPHGGNREVPGSHPRTGEGQVAAPGKFGTARDGGTEELAQLVSKAVEARFGKKPYLVASRAHRRYVDPNRPADAAFEDPA------AERVYRQYHDTLEGCCRTVRK--EFGRGLLLDLHGQGSKANTVFRGTQNGKTVAL-LRERFGEPAHSGPESLTGLLKGRGWTMHPDPFEGREQGGFTGGYIVQTYSGEPFGLDAIQLEFGNDYRKPDAREQTARDLAEAAFH 273
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A517Y0K4_9BACT (N-formylglutamate amidohydrolase n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517Y0K4_9BACT) HSP 1 Score: 109 bits (273), Expect = 4.660e-24 Identity = 84/247 (34.01%), Postives = 118/247 (47.77%), Query Frame = 3 Query: 102 LPVVLTAPHGGNAEF-GHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHRE-----------------GEGFLWHLRQLYGGVIKPGVGEEEVSGYKGGHTVHRHAGR-GIDAVQLEFGSSLRASQARAEVGEKVAKAI--YHHL 779 +PV+++APHGG E G + R + P G T D GT +L + ++ TGK PY+V ARF R Y+DANR DV E A+ + YH ++ + ++ R LL+D+H QA+ P SV+ GT+DG T V L + G GF H +L G +E + GG+ V ++G G+DAVQLEFG L + E KVA AI +H L Sbjct: 41 MPVIISAPHGGTGEIPGVPTRRGVGLPTGPNGFYTGRDPGTEELAATLAVEVFLKTGKRPYLVTARFSRRYVDANRPADVAYE------SPRAKPVYDAYHDTLAGFCKEVRKV--HGRGLLLDVHNQATFPDSVVRGTQDGKT--VALLRQRFGEKAHCGPDSLLGLLGGAGFKTHPAKLDG---------KEHDNFNGGYIVRTYSGDYGLDAVQLEFGWMLTTPVSAPETAGKVAAAIDQFHRL 268
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A5C5ZL51_9BACT (BPL_N domain-containing protein n=2 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C5ZL51_9BACT) HSP 1 Score: 114 bits (285), Expect = 5.170e-24 Identity = 88/245 (35.92%), Postives = 126/245 (51.43%), Query Frame = 3 Query: 102 LPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLA---DVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIKPGVG--------EEEVSGYKGGHTVHRH-AGRG--IDAVQLEFGSSLRASQARAEVGEKVAKAIYHHLQPLAP 794 LP++L+APHGGN LPR GVR+ + D GT +L + G L++ TGK PY+VVA FHR ++DANR + E E+ + YH ++ + + + R R LL+DIHGQ+ P ++L GT +G T + R G L R L G + + + E E S Y GG V ++ +G+G +DA+QLE G +LR+ AR V EK+A AI Q P Sbjct: 47 LPIILSAPHGGNELI----PGALPRKGI--GVRSFSNTMDFGTKKLALQTAGALERQTGKRPYIVVASFHRKFVDANRSEERAYE------SEESARAYHAYHEALSQARQDV--IHRWGRGLLLDIHGQSEVPDAILRGTVNGRTT-THLVSRFGLESLIGDRSLLGQIAQQALSVVPEVDSAEREHSAYNGGFIVSKYGSGKGGTMDAIQLEVGRNLRSFDARPAVAEKMANAIASFAQEYMP 276
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A517T1J5_9BACT (BPL_N domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A517T1J5_9BACT) HSP 1 Score: 113 bits (282), Expect = 1.250e-23 Identity = 78/234 (33.33%), Postives = 123/234 (52.56%), Query Frame = 3 Query: 102 LPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANR-DVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIK------PGV--GEEEVSGYKGGHTVHRHA---GRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767 LP++L+APHGG+ + R + R D+ T L +EI LQ+ TGK PY+VVA+FHR Y DANR +D Y + P A++ + YH ++ R ++ R Q+ +L+DIHGQA++P ++ GT++G+T H G L L+G + K P V +++ Y GG+ V + G +DA+QLE G LR++ A +++A A+ Sbjct: 36 LPIILSAPHGGSQAIAGAAERT---GQGVRQFRNRTDLNTGTLTQEIANALQRKTGKRPYLVVAKFHRKYADANRRPLDA---YESSP----AQQAYDAYHQALSDARRQVEY--RWQQGILLDIHGQAANPQAIYRGTQNGATVSHLLKHH-GRAALIGPGSLFGQLAKQDFPVVPNVDLADQDHPSYDGGYIVVTYGSDRGGTVDAIQLELGRDLRSADQLATTADRIANAL 256
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A2Z3GZA6_9BACT (Uncharacterized protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3GZA6_9BACT) HSP 1 Score: 108 bits (269), Expect = 2.060e-23 Identity = 79/234 (33.76%), Postives = 116/234 (49.57%), Query Frame = 3 Query: 105 PVVLTAPHGGNAEFGHQSTRFLPRPDDMP----GVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIKPG-------VGEEEVSGYKGGHTVHRHAGR--GIDAVQLEFGSSLRASQARAEVGEKVAKAI 767 PV+L+APHGG + S R + D +P G D GT +L + + TGK PY+VVA+FHR +IDANR ++ E A +A+ T+ Y ++ R +K R R LL+DIHGQ +V+ GT+DG T + + R GE +G + G + ++E + GG V + GIDA+QLEFG R + +R +KVA A+ Sbjct: 51 PVILSAPHGGTKDVPGVSPR---KGDGLPVGGSGFFAGRDGGTEELAHATAAAIAKKTGKKPYLVVAQFHRKFIDANRPPEIAYEDA------KAKPTYDAYRGTLASYCREVKK--RYGRGLLLDIHGQGRMKDTVIRGTKDGKTVAL-LVQRYGEKAHTGPNSFFGLLAAGGYKVYPEKLADKEYATLSGGDIVQTYGSGDYGIDAIQLEFGGDFRDAASRTATADKVAAAV 272
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: UPI00112984AB (N-formylglutamate amidohydrolase n=1 Tax=Pseudorivibacter rhizosphaerae TaxID=2570323 RepID=UPI00112984AB) HSP 1 Score: 107 bits (266), Expect = 3.340e-23 Identity = 80/245 (32.65%), Postives = 116/245 (47.35%), Query Frame = 3 Query: 93 GAQLPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGV------IKPGVGE---EEVSGYKGGHTVH---RHAGRGIDAVQLEFGSSLRASQARAEVGEKVAKAIYHHLQPLA 791 G LP++LT PH G+ G R + T+ D+GT L E++ L+Q P +V+A+F R Y+DANR AE EA T+ YH + R V ++ Q LL+DIHGQ+ P++ GTR G T + + G + + + GG+ + P +G EE + GGHTV H +GIDA+Q EFG + RAS + AE + +H LA Sbjct: 30 GGSLPLLLTVPHDGDESIGSVPVRTVGA--------TVRDLGTRPLAEKVASLLEQKLKARPRLVIAKFSRKYLDANR-----AEQDAMQS-PEALPTYQAYHAEVARHVSELRVAF-PQGALLLDIHGQSEDPNTTFRGTRAGLTVKA-LVQKHGIEAIQGEKSILGGLASKGYNVNPSLGSVSLEEDRRFAGGHTVFFYGSHRPQGIDAIQFEFGKNQRASWSLAEHFAEAITTFLNHYGYLA 258
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A1Z8ZVU7_9BACT (BPL_N domain-containing protein n=1 Tax=Verrucomicrobiaceae bacterium TMED86 TaxID=1986881 RepID=A0A1Z8ZVU7_9BACT) HSP 1 Score: 110 bits (276), Expect = 3.540e-23 Identity = 79/241 (32.78%), Postives = 122/241 (50.62%), Query Frame = 3 Query: 102 LPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIK------PGVG-EEEVSGYKGGHTVHRH---AGRGIDAVQLEFGSSLRASQARAEVGEKVAKAIYHHLQPLAP 794 LP+VL+APHGG+ + R + D+ D+ T QL ++ +++ TGK PY+VVA FHR +IDANR D+ E +A+ + YH +I R + R R +L D+HGQA+ ++ GT++G T + + G+ L + ++G K P +G E+ + Y GG+ V + +G +DA+QLEFG LR+ + E KVA AI Q P Sbjct: 31 LPIVLSAPHGGSLKIEGVPER---KGQDVKRFVRTKDMWTDQLTVKLADSIEKKTGKRPYVVVANFHRKFIDANRSADLAYE------SPKAKPVYDSYHRAIASARREVLQ--RWGRGMLFDVHGQAAEAKAIFRGTQNGQTTSH-LVGKFGQEALSGEKSVFGLFAKESIAVIPDLGPEQRETRYTGGYIVRTYGSSSGGAMDAIQLEFGRELRSIENNDETARKVANAIVEFSQRYLP 259 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_101.7.2 >prot_C-australica_Contig_101.7.2 ID=prot_C-australica_Contig_101.7.2|Name=mRNA_C-australica_Contig_101.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=345bp MDYYRNFLPLQLPSLDDGGGTSLVCYRCSGAQLPVVLTAPHGGNAEFGHQback to top mRNA from alignment at C-australica_Contig_101:11957..13703- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_101.7.2 ID=mRNA_C-australica_Contig_101.7.2|Name=mRNA_C-australica_Contig_101.7.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1747bp|location=Sequence derived from alignment at C-australica_Contig_101:11957..13703- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_101:11957..13703- >mRNA_C-australica_Contig_101.7.2 ID=mRNA_C-australica_Contig_101.7.2|Name=mRNA_C-australica_Contig_101.7.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1035bp|location=Sequence derived from alignment at C-australica_Contig_101:11957..13703- (Chrysoparadoxa australica CS_1217)back to top |