mRNA_C-australica_Contig_101.4.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: D7FS43_ECTSI (Putative: flagellar radial spoke protein 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS43_ECTSI) HSP 1 Score: 606 bits (1562), Expect = 3.650e-214 Identity = 296/439 (67.43%), Postives = 359/439 (81.78%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAVSTVSREQAKSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQSWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGRNRPMPEKLDDEGNPIEEEDPPEEVPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAE-PYQIPLPPAIQSEWAPPEEEENPLLEPADLLEDPNPPPGEGDEED 1386 MST++ +RQFLQ+ES DGV+LY HL +VLLKV+SERP +AS FEH+SASVKE K + ++ ++ A + QL W + ALF VPDEPPEGG +PD+LDEANMW+W GVS G++ETYR+YL+VKKLAESLPGEHE+LRFWG+ITTR +Y++ EG+ LDE LGEFDE+ QEG G NR TYW ++ PG+ W +LPPVTQA ITA+R IK+Y TGDL +PV+GYPPFPGTE NLLRA IARI+AG VSP+GFFEVDE+AEP ++KVAE E+INE+FPK EELMT DGWVHHE ELN LGR RPMPEKLDDEGNPIEEEDPPEEV PLRSLAED+EG+WGFRTCPAGAG +AN+ VVAK+L WPGA AV+FG+RFTN+Y GDG+K+ E P+Q LPP +Q EW P E+EE L+E AD+L DPNPP GE +E++ Sbjct: 1 MSTYEGSRQFLQQESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQSNQALFAVPDEPPEGGAVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYVVVEGKALDETLGEFDEALQEGKDGGNRCTYWVARSPGREWKELPPVTQAQITAARKIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIEEEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLRWPGAIAVAFGKRFTNVYSGDGVKFGGEGPFQPSLPPMLQPEWTPGEDEEG-LVEQADVLVDPNPPEGEEEEDE 438
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A835YNL7_9STRA (Putative flagellar radial spoke protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL7_9STRA) HSP 1 Score: 518 bits (1334), Expect = 1.110e-178 Identity = 256/397 (64.48%), Postives = 310/397 (78.09%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAVSTVSREQAKSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQSWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGRNRPMPEKLDDEGNPI-EEEDPPEEVPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQ 1260 M++F+EARQ LQKES DGV LYDHL V+LKV+S++ + SESFEH+SA+VKEA+A V+ VS A++AQ++W + +LF VPDEPPEGGP +PD+LDEANMW AG+S G ETYRI+LAVK+LAE+LPG+HETLRFWG++ R +YL+ EGR L+EQLG+ +E+ EG+ GANRYTYW S G G W QLPPVT A I A+R I++YLTGDL A V GYPPFPGTERN LRA IARI+AGTAVSPSGFFE D +A+P +K AE E INE+FPKP +L + D WVHHE+ELN LGRNRP+PE + P EEDPPEEVPPLRSLAED EG WGFRT PAGAGATANS VAK+LLWPGAYA++ GRR T +YVG +K+ A PY+ Sbjct: 1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYE 397
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A7S2XZR7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR7_9STRA) HSP 1 Score: 488 bits (1255), Expect = 2.000e-167 Identity = 247/437 (56.52%), Postives = 314/437 (71.85%), Query Frame = 1 Query: 85 DEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAVSTVSRE-----------QAKSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQSWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGRNRPMPEKLDDEGNPIEEEDPPEEVPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQIPLPPAIQSEWAPPEEEENPLLEPADLLEDPNPP 1362 +EARQFLQK S DGV+LY+HL+ VLLK++ ERP NA+ESFEHISA VK + + + A S + Q + QLDW + S LF VPDE P+ PA PD++DEANMW+WAG+S G+ +TYR+YL+VK LAESL ++E+LRFWG+I TR+G+Y I EGRT ++ EFD QEG G+NRYTYW +K W LP +T I SR ++K LTGDL APV YPPFPG E++LLRA IARI+ T VSP+GFFE+DE++E +K+A+AETI ESFP+P EEL GW HHEMELNV GR RPMPE LDD+G P+E+E+ PEE+ PLR+L D EG W FRT P GAG +A S VVA++++WPGA A++FG+RFTNIYVG G+K+ Y P+P +Q EW P EE++ PLLE D+L DPNPP Sbjct: 6 NEARQFLQKNSADGVSLYEHLSEVLLKILIERPSNAAESFEHISAMVKSSTIQPSKAGSITDDDELIQESRKISKQVRKKQLDWASSSLKLFKVPDEIPDAIPAFPDMMDEANMWEWAGISFGREQTYRLYLSVKTLAESLNPDYESLRFWGKINTRNGDYYIVEGRTFEDP--EFDPMLQEGRDGSNRYTYWVAKSATSGWTMLPNLTMEQIVISRQLRKLLTGDLDAPVWSYPPFPGQEKHLLRAQIARITHSTCVSPTGFFEMDEDSEEPLIKLADAETIAESFPRPLEELRITGGWCHHEMELNVRGRCRPMPEVLDDDGEPVEDENAPEEIEPLRTLDNDDEGAWTFRTAPGGAGESARSMVVARSMVWPGAVAIAFGKRFTNIYVGYGLKFSPTSYTPPMPLPLQKEWEP-EEDDEPLLESEDVLVDPNPP 439
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A7S1UB83_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB83_9STRA) HSP 1 Score: 387 bits (995), Expect = 5.890e-128 Identity = 213/456 (46.71%), Postives = 294/456 (64.47%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKE------AKAKVTAAVSTVSREQAKSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAE-SLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQSWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEA--EPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGRNRPMPEKLDDEGNPIEEEDPPEEVPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQIPLPPAIQSEWAP------PEEEENP----LLEPADLLEDPNPPPGEGDEE 1383 M+T +EA+QF+ E + G +LY HL+ V+L+++ ++P++A FEHISA+VKE + A + V + QL W ++AL+ VPDEP EGGPALPD++D A M++ AGVS G ET+R+ L++K LAE + +E+ RFWGR+ TR G + +AE T+DE E D + EG+ GAN+YTY+ + W +LP V A + ++ +++YLTGDL A V GYPPF GTE + LRA I RI+A VSP+GF+E DE+A EP K+ +AE + E+ P EEL + DGWV HEM + +GR R +PE +DE + E + PE PL +LA+D EG+W RT P GA ATAN+FVVA++L WPGA+A++ +FTNIYVGD + Y A Y P+PPA+Q EW P PEE E P L+E DLLEDP PP EG+E+ Sbjct: 1 MATLEEAKQFMSMEDEAGQSLYAHLSDVILQILVDKPKDARRDFEHISAAVKEQAFAAPSPADLVDGVKKTAEPAGAEKQLAWAQAAAALYAVPDEPAEGGPALPDLMDLARMFELAGVSFGAEETFRLALSLKTLAEKNADAGYESFRFWGRVETRAGYFYVAEAPTVDEIEIE-DAAKMEGAEGANKYTYFVTPSSSADWTKLPHVNAAQLVVAQKLRRYLTGDLAAKVPGYPPFEGTEAHYLRAQIGRITAECGVSPAGFYEADEDAGLEPAPAKIKDAEGLAEAPPTMGEELRSLDGWVRHEMLITAIGRCRALPEPEEDENGEVPELEQPEIKEPLSALADDEEGSWVLRTAPGGAAATANAFVVARSLKWPGAFAIAGAGKFTNIYVGDAVPYAAATYTPPMPPALQKEWLPEGADEEPEEGEPPKPQTLVEQKDLLEDPTPPEEEGEED 455
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A7S3M2Q3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2Q3_9STRA) HSP 1 Score: 374 bits (961), Expect = 4.420e-123 Identity = 216/450 (48.00%), Postives = 286/450 (63.56%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAVSTVSREQAK-----SAQLD----WVAKSSALFTVPDEPPEGGPA-LPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQS-WVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGRNRPMPEKLDDEGNPIEEEDPPEEVPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQIPLPPAIQSEWAPPEEEENP-LLEPADLLEDPNPPPGEGDEED 1386 M+T E RQ L E G +LY HLT L++++ ERP+NA +SFE ISA+VK A E K +A+L+ W K SAL P+EPPE +PD+LD+AN+++WAGVS G+ E YR+YL++KKL E+LP E E +R +G+I+TR Y I EG +++ E DES QEG GAN+Y YW ++ + W +LP V + +R ++ TG L A V YPPFPGTERNLLRA IA I+ T++SP G+F+++++ +P V AEAE + E FPK + EL P+GW HHE +LN LGR MPE+ D+ G IE EDP E PL ++ +A W FR CP G G++A S VVA++LLWPGA AV+ GRRF N+YVG G+ Y A Y PLP AIQ+EWAPP EEE L+E AD DP PP EG+EE+ Sbjct: 1 MATAAELRQILS-EDPSGKDLYGHLTETLMRILIERPKNAYDSFELISAAVK-------ANPLNPDPENGKPLPPSAAELEKMLAWAKKCSALLKNPEEPPEDPSVKVPDLLDDANLYEWAGVSFGKGEIYRLYLSIKKLCETLPAEVEKIRLFGKISTRSLPYYIVEGLNPEDE--EADESKQEGKNGANKYAYWVTQSIEEGKWTKLPNVNMEQVVKARLFRRLFTGSLDAAVPSYPPFPGTERNLLRAQIACIAGATSISPDGYFDLNDD-DPPQVVPAEAEAMAERFPKTSSELKDPEGWKHHEADLNRLGRVTAMPEQQDENGEVIEPEDPVEAATPLDTIKPEA---WTFRVCPGGVGSSAGSAVVARSLLWPGAVAVTAGRRFVNVYVGSGVAYTATAYSPPLPAAIQAEWAPPAEEEGAALIENADTRADPTPPKPEGEEEE 436
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A7S3XSR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSR5_HETAK) HSP 1 Score: 358 bits (918), Expect = 5.880e-118 Identity = 180/311 (57.88%), Postives = 228/311 (73.31%), Query Frame = 1 Query: 256 VSTVSREQAKSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQSWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGRNRPMPEKLDDEGNPIEEEDPPEEVPPLRSL-AEDAEG----TWGFRTCPAGAGATANSFVVAKNLLW 1173 V+ +S+E K AQLDW K+ + V DE P+ PA PD++DEANMW+WAGVS G+ ETYR+YL+VK LAESLP ++E+LRFWGR++ R G Y I EG+T +++ + D +EG GAN+YTYW + + W +LPPVT A + A+R +++ GDL APV YPPFPG ER LLRA IARI+ GTAVSP+GFFE+DEE+E +K AEAE INE FPKP EEL GW HHE+ELN LGR RPMPE+LD+ G+PIE+ED PE V PLR+L AED EG TW FR PAG+G +ANS VVA++L+W Sbjct: 34 VAKLSKELRK-AQLDWAGKTLKHYKVADELPDAFPAFPDLMDEANMWEWAGVSFGREETYRLYLSVKVLAESLPADYESLRFWGRVSARGGAYYIVEGKTFEDKE-DLDPEKEEGRDGANKYTYWAATAATEKWERLPPVTMAQVVAARRVRRLFAGDLAAPVVAYPPFPGAERELLRAQIARITHGTAVSPAGFFELDEESEEPQIKFAEAEAINEVFPKPLEELKERAGWAHHELELNTLGRCRPMPERLDENGDPIEDEDAPEAVDPLRTLDAEDEEGREEPTWTFRAGPAGSGESANSHVVARSLVW 342
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A0P1AK23_PLAHL (Radial spokehead-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK23_PLAHL) HSP 1 Score: 305 bits (782), Expect = 4.560e-96 Identity = 193/461 (41.87%), Postives = 278/461 (60.30%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAVST------VS--REQAKSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQ-SWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNV-LGRNRPMPEKLDDEGNPIEEEDPPEEV--PPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQIPLPPAIQS----EWAPPEE----EENPLL------EPADLLEDPNPPPGEGD 1377 M+T +EA+ FL+KES DG NLYDHL+ VLLK+I ERPE E+FE+IS VK+ + ++T VS +++A++ Q ++ + L + + + D+LDEAN+++WAG+ + ET+R+ LA++ LA+++ E LRFWG+I R ++ IAEG + + D A+EG AG N+ TYW K G WV+LPPV I A+R + +Y+ GDL AP+ G+PPFPG E+N LRA IARISAGTA+SP+G+F+V E ++A AET K TE+L+ W H E+N GR PMP L+ +G EEE EE PPLR ++ED +W PA + +A++L+WPGA +++ G++F NIYVG G+K++AEPYQ+PLP +Q+ W+ EE ++ P L E DLLEDP+PP E D Sbjct: 1 MTTLEEAKAFLKKESNDGTNLYDHLSDVLLKIIVERPEGLHETFENISTLVKQERYVAPHDLTTDDQSSQVSSRKKEAQTYQENYSNTALDLLKLQTDNTMASTSKVDLLDEANLFEWAGLGFSKSETFRLSLALQSLAQTI--ETVNLRFWGKILGRKADFYIAEGELVQAYEPQ-DLEAEEGFAGVNKLTYWAMKDNGTYQWVRLPPVRCEQIVAARQLCRYVQGDLEAPISGHPPFPGLEKNFLRAQIARISAGTALSPAGYFDVTEG------EIAPAETFEV---KSTEQLLELKNWTHIAKEINARYGRMTPMPPLLNADG---EEESREEETFAPPLRDISEDEPLSWRLDRQPATRQPSVGDIAIARSLIWPGAVSIAVGKKFCNIYVGHGVKFRAEPYQLPLPQQLQTGSGVSWS--EETSDVDDKPTLSCVLPVEQPDLLEDPSPPTDEED 444
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: A0A8K1CG11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG11_PYTOL) HSP 1 Score: 303 bits (776), Expect = 3.830e-95 Identity = 186/456 (40.79%), Postives = 270/456 (59.21%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAV---STVSREQAKSAQLDWVAKSSALFTVPDEPPEG-----GPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQS-WVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNV-LGRNRPMPEKLDDEGN--PIEEEDPPEEVPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQIPLPPAIQ-------SEWAPPEEEENPLL-------EPADLLEDPNPP 1362 M+T +EA+ FL+KE DG NLYDHL+ VLLK++ ERPEN ++SFE++S VK+ + A ++ +++Q+K+ Q +W + L + E G P + D+LDEA+M++WAGV Q ET+R+ +A+++LA++ +LRFWG++ +Y IAEG E D +EG AG N++TYW K G+ WVQLP V +A I A+R +++Y+ GDL V G+PPFPGTE++ LRA IARISAGT ++P+G+F+ ++ E V+ EA K E+L WVH E+N GR PMP + + +G+ P E ED PLR+L+EDA G+W PA F V ++L+WPGA +++ G++F N+YVG G+K+ AEPYQ PLP +Q SE A E + L E D+LEDP PP Sbjct: 1 MTTLEEAKAFLKKEGPDGTNLYDHLSDVLLKILVERPENLNDSFEYLSTIVKQQRFVPPALADNNTSSAKQQSKTHQENWTTAALDLLKIKSEDEAGVAAERPPGVADLLDEAHMFEWAGVGFSQSETFRLSVALQRLAQAQGTT--SLRFWGKLLGLGADYYIAEGELAAPPEPE-DVIGEEGVAGVNKFTYWAMKDDGKYVWVQLPNVKRAQILAARQLRRYIRGDLEGKVTGHPPFPGTEQHFLRAQIARISAGTVLAPAGYFQTNDNNEIEPVEEVEA--------KSAEQLADLGSWVHFSKEINARYGRMTPMPPQTNADGDLIPWEGED---FASPLRALSEDAAGSWRVDRYPATLIPAVGEFAVVRSLIWPGAVSIAVGKKFLNVYVGHGVKFSAEPYQRPLPETLQVGYGIAFSEDAGEEGADAKALLRFEGLSEQKDVLEDPTPP 442
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: D0N4D2_PHYIT (Flagellar radial spoke protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4D2_PHYIT) HSP 1 Score: 301 bits (770), Expect = 3.130e-94 Identity = 189/456 (41.45%), Postives = 267/456 (58.55%), Query Frame = 1 Query: 73 MSTFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKV-----TAAVSTVS--REQAKSAQLDWVAKSSALFTVP---DEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQ-SWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPGTERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNV-LGRNRPMPEKLDDEGNPIEEEDPPEE---VPPLRSLAEDAEGTWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGIKYQAEPYQIPLPPAIQSEWAPPEEEEN------------PLLEPADLLEDPNP 1359 M+T +EA+ FL+KES DG NLYDHL VLLK+I ERPEN E FE+IS SVK+ + T S +S ++QA++ Q +W + L + D P E + D+LDEANM++WAG+ + ET+R+ LA+++LA+S +RFWG+I R +Y +AEG L D A+E + GAN+ TYW K G WVQLPPV + I A+R +++Y+ GDL APV G+PPFPG E+N LRA IARIS+GT + P+G+FEV+EE + V+ E K T +L+ W H+ E+N GR PMP + +G EE+P E VPPLR+L+ED +W P + V ++L+WPGA +++ G++F N YVG G+KY +EP+Q+ P +Q+ EEN P+ +P DLLEDP+P Sbjct: 1 MTTLEEAKAFLKKESPDGTNLYDHLGDVLLKIIVERPENLHEMFENISTSVKQQRYLAPPLPPTDGDSQLSSYKKQAQTHQENWCNVALELLKLKSQDDAPSEAATGVADLLDEANMFEWAGLGFSKGETFRLSLALQRLAQS--NNTVNMRFWGKILGRGADYYVAEGE-LSTAYEPEDLDAEESATGANKLTYWAMKDNGMYQWVQLPPVGRDQILAARQLRRYVRGDLEAPVLGHPPFPGVEKNYLRAQIARISSGTVLCPAGYFEVNEEGDITPVEEPEI--------KATADLLDLGSWTHYTKEINARYGRMTPMPPLTNADG----EEEPREGGEFVPPLRALSEDKPMSWRVDRLPGTLQPSVGEVAVVRSLVWPGAVSIAVGKKFLNAYVGHGVKYLSEPFQLAPPQRLQTGSCVGLSEENAEEGKSTLRCEIPVEQP-DLLEDPSP 440
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Match: F0YMJ9_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMJ9_AURAN) HSP 1 Score: 300 bits (767), Expect = 6.330e-94 Identity = 177/435 (40.69%), Postives = 263/435 (60.46%), Query Frame = 1 Query: 79 TFDEARQFLQKESKDGVNLYDHLTSVLLKVISERPENASESFEHISASVKEAKAKVTAAVSTVSREQA----KSAQLDWVAKSSALFTVPDEPPEGGPALPDILDEANMWQWAGVSLGQMETYRIYLAVKKLAESLPGEHETLRFWGRITTRDGNYLIAEGRTLDEQLGEFDESAQEGSAGANRYTYWTSKGPGQSWVQLPPVTQAHITASRAIKKYLTGDLGAPVRGYPPFPG-TERNLLRALIARISAGTAVSPSGFFEVDEEAEPVAVKVAEAETINESFPKPTEELMTPDGWVHHEMELNVLGR-NRPMPEKLDDEGNPIEEEDPPEEVPPLRSLAED--AEG-TWGFRTCPAGAGATANSFVVAKNLLWPGAYAVSFGRRFTNIYVGDGI-KYQAEPYQIPLPPAIQSEWAPPEEEENPLLEPADLLEDP 1353 +F+EA+Q+L++E +DG +LY+HL+ VLLKVI E+P+NA+ FE +S ++ A +V + T + K +QLDW S L+ P E PD++ EAN+++WAG++ G+METYR+YLA+K+ A E +LRFWG+IT R G+Y + +G D E + + EG+ GAN+Y +W G +W +LP T I +R IK++ TGDL APV YPPFPG TE +LLRA IA I++ ++SP GF+ D+EAE + + E +++ K E+L WVHHE+ +NV GR N+P + +++G +E P ++P L ++AED +G W CP G G + +S V+AK+L WPGA A +FG +F N+Y G G + Y+ P P IQ EWAP EE++ L+E D + P Sbjct: 2 SFEEAKQYLRQEDEDGNSLYEHLSRVLLKVIVEKPQNANAMFEQLSQELRGA-TQVKPTLPTEGEPEIAKPEKKSQLDWCGAVSNLYA-PTEGDATEITYPDLMTEANVYEWAGINFGKMETYRLYLAIKQKAVV---EARSLRFWGKITGRSGDYFVVQGDNPDPPSAE-EITTVEGAEGANKYAFWVCTYAGGTWTKLPDTTPEAIVVARQIKRFFTGDLDAPVPSYPPFPGGTEAHLLRAQIAMITSECSISPGGFYAEDDEAEEGIKAIKKVEEMDDF--KSAEDLKDASNWVHHEVPINVNGRCNQPPANEEEEDGAEPSDELP--DLPLLGAIAEDEITDGPAWSISVCPGGTGESPDSVVIAKSLKWPGAVAAAFGNKFINVYGGFGFASSRGVSYEPPRVPPIQKEWAPTEEDDKGLIEDEDKITQP 426 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_101.4.1 >prot_C-australica_Contig_101.4.1 ID=prot_C-australica_Contig_101.4.1|Name=mRNA_C-australica_Contig_101.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=463bp PHHRTANLLLLLLGGTGSAASTNHMSTFDEARQFLQKESKDGVNLYDHLTback to top mRNA from alignment at C-australica_Contig_101:2970..5569+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_101.4.1 ID=mRNA_C-australica_Contig_101.4.1|Name=mRNA_C-australica_Contig_101.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2600bp|location=Sequence derived from alignment at C-australica_Contig_101:2970..5569+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_101:2970..5569+ >mRNA_C-australica_Contig_101.4.1 ID=mRNA_C-australica_Contig_101.4.1|Name=mRNA_C-australica_Contig_101.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1389bp|location=Sequence derived from alignment at C-australica_Contig_101:2970..5569+ (Chrysoparadoxa australica CS_1217)back to top |