mRNA_C-australica_Contig_101.21.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: UPI001EB03777 (regulation of enolase protein 1-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB03777) HSP 1 Score: 115 bits (288), Expect = 1.380e-26 Identity = 71/217 (32.72%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 391 LKWRDSPQP-EAWSDIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAANTASD-CWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVLNDKQ--WQYISIAHMSGLAGSHADMGIFAASPGKEGGGIASFDSFSL 1029 L+W P+ ++ ++ G L + + P+TD+W++T+Y P + N L D +VET F + ++FDQAGLM+RLD HWVK G+EYSD RLS VVT+ S WS +W S+ L LRL+R+GDS+VVE + W++I IAH++ + +G+FA P G F+ ++ Sbjct: 24 LQWFSPPKSYQSKANNGSGLKLNMDPLTDFWQRTYYVPELRNDNGHFLYTVIKEDKVYVETEFEVLSTNKFDQAGLMVRLDGDHWVKTGLEYSDGAWRLSCVVTNYNSDWSTTKWD----------------------------------SSKLTLRLFRLGDSIVVERKDPSSDNWEFIRIAHLNNPQKADVKIGLFACEPVTAPGSSVVFNYLNI 206
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A7S2VQR3_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VQR3_9DINO) HSP 1 Score: 116 bits (290), Expect = 1.670e-26 Identity = 78/227 (34.36%), Postives = 107/227 (47.14%), Query Frame = 1 Query: 430 DIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAANTASD--CWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEV-----LNDKQWQYISIAHMSGLAGSHAD-------------------MGIFAASPGKEGGGIASFDSFSLT 1032 D G+LVI P D+WRKT+Y+PV+ K + P L A ++ +ET+FTLTP QFDQAGL +RLD+ HWVKAGIE D PRLS V + ++ WS W P A L+++L++IG ++VVE + +I IAH+S G D MG+FA P ++ G A F S+T Sbjct: 39 DGAGQLVISAPTKKDFWRKTYYAPVVCKDDGPCLFATIPAEETVMMETAFTLTPKRQFDQAGLCVRLDHEHWVKAGIEVVDGKPRLSCVFCNGYADWSTQPW---------------------------------PEPA-LRIKLHKIGSNIVVEAGPKGSSGNDGLTFIRIAHLSLAQGMSVDPLADVKCDEGPAAPAGHVWMGVFACCPEEQAGCTAVFHHLSIT 231
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A482SQ67_9ARCH (DUF1349 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQ67_9ARCH) HSP 1 Score: 111 bits (278), Expect = 5.210e-25 Identity = 75/223 (33.63%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 403 DSPQPEAWSDIGGKLVIEIPPMTDYWRKTFYSPVINKGNA-------PMLAANTASDCWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVLNDKQWQYISIAHMSGLAGSHAD-----MGIFAASPGKEGGGIASFDSFSLTP 1035 DS + S+ G +L+++ P D+WRKTFY+P++ K +A P A C V+ F TP QFDQAG+++ +D +HW+K GIEY D RLSVVV + +S WS WQ K +R+ + V S+S+ + +G ND +++I IAH+ + D +G+FAA PG++ G +A+F FSL P Sbjct: 27 DSVHGYSVSENGAQLILKPPSHKDFWRKTFYTPLLVKSDAIGYMQSIPAPAKEVEMTCKVD--FQYTPISQFDQAGMLIYVDDSHWMKCGIEYCDGSTRLSVVVCNGYSDWSTEIWQ----------SKEVRLKV-----------HTVSQSSSIVVEAASVG-------FND--YRFIRIAHLQSVVNEDNDPLDWQVGVFAACPGEQRGCVATFSQFSLGP 217
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A7S0W2L4_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W2L4_9CRYP) HSP 1 Score: 110 bits (274), Expect = 1.220e-24 Identity = 83/233 (35.62%), Postives = 108/233 (46.35%), Query Frame = 1 Query: 424 WSDIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAANTASD--CWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRI----------GDSLVVE----VLNDKQWQYISIAHMSGLAGSHADMGIFAASPGK-EGGGIASFDSFSLTPCPVGEPCFWHNA 1071 W GG+LV+ P D+WRKT+Y P++ K + L A VET FTLTP QFDQAGL RLD HW+K GIE D PRLS VVT+ +S WS W+ + S LR+ + ++ + A EA S +L + RI G++ V E + K W MG+F P + EGG + F SFS G F HNA Sbjct: 1 WDVEGGELVLRPPSKKDFWRKTYYEPLLCKDDGACLFAEVPEGEAATVETEFTLTPKRQFDQAGLCARLDCEHWIKTGIEVVDGSPRLSCVVTNGYSDWSTQSWKMDPS----GDAVSLRIRMSKMGSKGAYVVEASEAGGS-ELFMIRICHMARSHGCTGEAAVCEEGPPAPDGKVW-----------------MGVFGCCPEEQEGGCVVRFRSFSAR----GGTSFHHNA 207
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A8J1XIY8_OWEFU (Ofus.G021433 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XIY8_OWEFU) HSP 1 Score: 108 bits (269), Expect = 1.880e-23 Identity = 76/223 (34.08%), Postives = 102/223 (45.74%), Query Frame = 1 Query: 391 LKWRDSPQP-EAWSDIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAANTASDCWV--ETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVLNDKQ----WQYISIAHMSGLAGSH---ADMGIFAASPGKEGGGIASFDSFSL 1029 LKW + P E + G + I TD+W+KT+Y + N MLA D V ET F L P HQFDQAGLMLRLD HW+K GIE D P+LS VVT+ +S WS EW N +L +RLY++ +VVE L + W+++ IA + H +G+FA +P K + FD S+ Sbjct: 56 LKWLNEPHKVELKTKDGAGIRIFPDDKTDFWQKTYYPNNMRNNNGHMLAMEIPVDSNVMAETHFNLEPVHQFDQAGLMLRLDDEHWIKTGIEVVDGAPKLSCVVTNVYSDWSTTEWPTN----------------------------------NLTIRLYKLDSDIVVEHLTPNKDTGKWEFMRIARLRTDDTPHLKTCTLGLFACAPTKSDFSVV-FDYLSI 243
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A7S4T153_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4T153_9DINO) HSP 1 Score: 107 bits (266), Expect = 3.510e-23 Identity = 84/226 (37.17%), Postives = 114/226 (50.44%), Query Frame = 1 Query: 391 LKWRDSPQPEAW--SDIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAANTASD--CWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDE-FSAWSAFEWQWNTSRG-----QCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVLNDKQWQYISIAHM-SGLAGSHADMGIFAASPGKEGGGIASFDSFSLTP 1035 L+W S QP +W D G+L I DYW +T+YSP++ K NAP L A ++ +E FTL P QFDQAG+++R+D + W KAGIEY D PRLS VVT+ FS WS + S G GG ++ V + A+ +E P + K + K W +I IA + SG H MG FAASP ++ GG A+F + P Sbjct: 23 LEW--SYQPTSWRIDDASGELQITPDTGRDYWSRTYYSPLLVKANAPGLLAKVPAEEEVTLELDFTLRPVEQFDQAGVLVRVDDSTWAKAGIEYCDGAPRLSCVVTNHGFSDWSTTVLD-SLSLGIRVHKLLPGGDQGPCLVVEVASTPAQAEEEEPTEPAAKKQ-------------KAKAWNFIRIAPLRSGDKPWH--MGPFAASPIEQRGGSATFHFMRIGP 230
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A7S3L3N5_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3N5_9STRA) HSP 1 Score: 108 bits (269), Expect = 9.120e-23 Identity = 78/221 (35.29%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 421 AWS--DIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAAN-------TASDCWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDE-FSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVE--VLNDKQ--WQYISIAHMSGLAGSHA----DMGIFAASPGKEGGGIASFDSFSL 1029 +WS + +L I P DYWRKT+Y P++ K + P L N T++ + T F LT QFDQAG+M+R++ HW+K GIE D RLS VVT+ +S WS W+ T+ G +++ + VP LR++ S+VVE LND W ++ IAH+ AGS A G+FA +P + GG A F FS+ Sbjct: 131 SWSVDEDANQLTITPPAKKDYWRKTYYRPIMIKDDGPFLHNNPLVVPLDTSAYYTLHTIFDLTATRQFDQAGIMIRINAEHWIKTGIEVVDGKARLSCVVTNHGYSDWSTQPWRGPTATTSSTNNNGGPILVV----------QKVP------LRVHWRAGSVVVESQYLNDDDTAWDFVRIAHLE--AGSAATTTFQAGVFACTPVDQRGGKAVFYDFSI 333
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: B5Y432_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y432_PHATC) HSP 1 Score: 107 bits (266), Expect = 9.970e-23 Identity = 75/237 (31.65%), Postives = 111/237 (46.84%), Query Frame = 1 Query: 445 LVIEIPPMTDYWRKTFYSPVINKGNAPML--AANTASDCWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVL-NDKQWQYISIAHMS-----------------------GLAGSHADMGIFAASPGKEGGGIASFDSFSLTPCPVGEPCFWHNATD 1077 L I P D+WRKT+Y P++ K + P L + + VET+F LT A QFDQAGL +R+ HW+K GIE D +PRLS VVT+ +S WS W + + + V + A+F R + +R++ G S VVE + K+W+++ I H++ A +G+FA P + G +F +FS+ G F HNA D Sbjct: 77 LTIMAPAKKDFWRKTYYEPILVKDDGPFLYHELDASQHYTVETTFHLTAARQFDQAGLCVRITPEHWIKTGIEVVDGVPRLSCVVTNIYSDWSTQPWSASPPTMESS------VSAEKSDAVFVRAQ----------IRIHCRGSSFVVEAKESSKEWEFLRIGHLNRDMRHTNDPLRNHSAVEKSWNGPSAAEGKLWVGVFACCPVDQQGSSVTFSNFSIA---AGSK-FDHNADD 293
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A7S2YMJ0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMJ0_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.010e-22 Identity = 71/203 (34.98%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 439 GKLVIEIPPMTDYWRKTFYSPVINKGNAPMLAANTASD--CWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDE-FSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVLNDKQ-WQYISIAHMSGLAGSHADM--GIFAASPGKEGGGIASFDSFSL 1029 G L I D+W+KT Y P++ K + +L A S +ET+F L QFDQAGLM+RLD HW+K GIE D + RLS VVT+ +S WS W +E ++RL+ G + VV+V N Q W+++ IAHMS A G+FA P + GG +F SF L Sbjct: 41 GMLTIYPAAQKDFWQKTHYDPLLIKDDGAILYATLKSHQHYTLETTFQLLAVSQFDQAGLMVRLDEHHWIKTGIEVVDQMARLSCVVTNHGYSDWSTQSWP---------------------SVPVDENQEGDVRQVDCQIRLHCRGTNFVVQVWNSNQEWEFVRIAHMSHADSHQATFRAGVFACCPVAQKGGHVNFTSFQL 222
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Match: A0A1Z5K5D3_FISSO (RmlD_sub_bind domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5D3_FISSO) HSP 1 Score: 108 bits (271), Expect = 3.660e-22 Identity = 86/252 (34.13%), Postives = 116/252 (46.03%), Query Frame = 1 Query: 286 VVALEGLQVVDDNEQLVPLLSLEQRWQQE-WEGEYDLKWRDSPQPEAWSDIGGKLVIEIPPMTDYWRKTFYSPVINKGNAPML---AANTASDCWVETSFTLTPAHQFDQAGLMLRLDYAHWVKAGIEYSDNLPRLSVVVTDEFSAWSAFEWQWNTSRGQCAGGKGLRVVLCRVQAIFARQKEAVPHSASLKLRLYRIGDSLVVEVLNDKQWQYISIAHMSGLAGSHADMGIFAASPGKEGGGIASFDSFSL 1029 VV + GLQ + D Q PL L R + W D + D +W KL+I DYWRKT+Y PV+ K + +L N VE F L A QFDQAG+ +R D HW+K GIE D PRLS VVT+EFS WS W+ + L VQ + ++R++ G S VVE ++ +I IA++ A A G+FA P + GG A+F F + Sbjct: 338 VVVISGLQDIYDPIQR-PLGRLHWRCAPDSWSPTTDREGCDG----SWRVEDNKLIIYPAAKKDYWRKTYYEPVLLKDDGAVLEYAGLNADQHYTVEAKFDLVAAAQFDQAGIFIRCDPEHWIKTGIEVVDGTPRLSCVVTNEFSDWSTQHWE---------SFRHLTPDTILVQDV--------------EMRVHCRGTSFVVEAKMGIKFDFIRIANLRVSADKFA-AGVFACCPEDQKGGFATFHEFRV 560 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.21.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_101.21.2 >prot_C-australica_Contig_101.21.2 ID=prot_C-australica_Contig_101.21.2|Name=mRNA_C-australica_Contig_101.21.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=206bp MTDYWRKTFYSPVINKGNAPMLAANTASDCWVETSFTLTPAHQFDQAGLMback to top mRNA from alignment at C-australica_Contig_101:62097..64094- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_101.21.2 ID=mRNA_C-australica_Contig_101.21.2|Name=mRNA_C-australica_Contig_101.21.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1998bp|location=Sequence derived from alignment at C-australica_Contig_101:62097..64094- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_101:62097..64094- >mRNA_C-australica_Contig_101.21.2 ID=mRNA_C-australica_Contig_101.21.2|Name=mRNA_C-australica_Contig_101.21.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=618bp|location=Sequence derived from alignment at C-australica_Contig_101:62097..64094- (Chrysoparadoxa australica CS_1217)back to top |