mRNA_C-australica_Contig_101.18.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: UPI001F173A05 (aldehyde reductase n=1 Tax=Amycolatopsis sp. GM8 TaxID=2896530 RepID=UPI001F173A05) HSP 1 Score: 269 bits (687), Expect = 5.940e-79 Identity = 169/378 (44.71%), Postives = 223/378 (58.99%), Query Frame = -2 Query: 1410 MSGSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLH--QLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGG-LELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLV 2534 M+ VLVTGG GFIAGH +LQLL+ GY V+A++ VRS L +A ++ LSFV ADLT D+GWA+A +VLH+A V V DEL+VPAREGTLRVLRAA+ AGV RVVLTS+ A GWGHP D V EA W+ D P ++ Y +KTLAE AAWD+ EGG ELV++LP V+GP++ KDV S +I +L+G+M PNL IVDVRD AA H+LA+ ++EA G RF + + ++E+ ++R++ G AAA VP R IPD +VR G+ S +R ++ DL AR+ S +KA +LGW R PEEA++A A+SLV Sbjct: 1 MTQQRVLVTGGSGFIAGHCILQLLEQGYLVRATVRSLHREAAVRSV----LTEAGMVNGDALSFVAADLTDDAGWADAVADVDFVLHVASPVQPGHVDDPDELIVPAREGTLRVLRAARDAGVTRVVLTSAFHAVGWGHPH---DDHVFTEADWTVIDGPG--VDAYGVSKTLAERAAWDFARDEGGSTELVTMLPVAVMGPIMGKDVSGSNHIIQRILEGDMPGFPNLFFPIVDVRDVAAAHILAMTTQEAAGQRFLISNGPAVPMKEIGALIRSSLG-------------------AAA-------------PNVPTRSIPDLVVRTGAKVSAQMRGIAADLGYARKTSNDKARKVLGWQPRGPEEAIVAAAQSLV 337
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: A0A7U3VS12_9ACTN (Putative dihydrokaempferol 4-reductase n=1 Tax=Streptomyces sp. SN-593 TaxID=659352 RepID=A0A7U3VS12_9ACTN) HSP 1 Score: 267 bits (682), Expect = 2.930e-78 Identity = 170/378 (44.97%), Postives = 220/378 (58.20%), Query Frame = -2 Query: 1410 MSGSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLHQ--LSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGGL-ELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLV 2534 M+ VLVTGG GFIAGH +LQLLD GY V+A++ VRS L DA +H L+FV ADLT D+GWA A G +VLH+A V V DEL++PAREGTLRVLRAA+ AGV RVVLTS+ A GWGHP D +V E W+ D+PE ++PY +KTLAE AAWD+V EGG ELV++LP V+GP+L DV S L+ +LDG+M P+L +VDVRD AA H+LA+ +K+A G RF ++++E+ +RA G AAA VP R +P +VR G+ F+ LR + +L R S +KA D+LGW R +AV+A ARSLV Sbjct: 1 MTPQRVLVTGGSGFIAGHCILQLLDQGYLVRATVRSLSREAAVRSV----LADAGMVHDDALTFVAADLTDDAGWAAAVTGVDFVLHVASPVRPGHVEDPDELILPAREGTLRVLRAARDAGVARVVLTSAFHAVGWGHPH---DDRVFTEDDWTVVDSPE--VDPYGASKTLAERAAWDFVRAEGGTTELVTMLPVAVMGPVLGHDVSGSNLLVKRILDGDMPGFPDLYFPVVDVRDVAAAHILAMTAKDAAGERFLICDGPAIAMKELGAWIRADLG-------------------AAA-------------PHVPKRSVPSFVVRAGARFNAELRHIRPELGHVRRPSHDKARDILGWRPRPARDAVVAAARSLV 337
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: A0A2C9D4K9_9HYPH (Cholesterol dehydrogenase n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2C9D4K9_9HYPH) HSP 1 Score: 266 bits (681), Expect = 3.840e-78 Identity = 158/373 (42.36%), Postives = 219/373 (58.71%), Query Frame = -2 Query: 1410 VLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLH--QLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGG-LELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLV 2519 VLVTGG GFIAGH +LQLL+ G+ V++++ + VR LKDA +H +LSFV ADL D GWAEA G VLH+A V V + E++VPAREGTLRVLRAA+ AGV RVVLTS+ A WGHP + V EA W+ D P ++ Y K+KTLAE AAWD++A EGG LEL ++LP V+GP++ KD+ S ++ MLDG M ++PNL + +VDVRD A+ H++A+ + A G R + +SL+E+ ++RAA G + +VP R +PD +VR+ + F+ +R DL A++ S +KA LGW+ R P EA++A A S+V Sbjct: 6 VLVTGGSGFIAGHCILQLLEQGHLVRSTIRSLAREESVRGV----LKDAGMVHSDRLSFVAADLLRDDGWAEAVAGMDVVLHVASPVQPGRVANEGEVIVPAREGTLRVLRAARDAGVSRVVLTSAFHAVSWGHPH---NDHVFTEADWTILDGPG--VDAYGKSKTLAERAAWDFIAAEGGGLELTTMLPVAVMGPVMGKDISGSNHIVQRMLDGAMPVVPNLFIPVVDVRDVASAHVMAMTNPAAAGERLLLSNGEALSLKEIGAIIRAALGDKAK--------------------------------RVPTRILPDFVVRIAARFNAEMRPFVPDLGYAKKTSNDKARRELGWTPREPREAIVAAATSMV 337
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: A0A3R8P6A6_9CAUL (Aldehyde reductase n=1 Tax=Caulobacter sp. 602-1 TaxID=2492472 RepID=A0A3R8P6A6_9CAUL) HSP 1 Score: 266 bits (679), Expect = 7.220e-78 Identity = 160/378 (42.33%), Postives = 221/378 (58.47%), Query Frame = -2 Query: 1410 MSGSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLH--QLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQE-GGLELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLV 2534 M+ VLVTGG GFIAGH +L LL+ G+ V+A++ R L+DA +H +LSFV ADL D GWA+A G VLH+A V V D ++VPAREGTLRVLRA + AGV+RVVLTS+ A GWGHP D V EA W+ D ++ Y K+KTLAE AAWD++A E GGLEL ++LP V+GP++ KDV S ++ MLDG M ++PNL + +VDVRD A+ H++A+ + A G RF + +SL+E+ ++R+A G +AA +VP R +PD +VR+ + F+ +R DL A++ S +KA +LGW+ R P EA++A A SLV Sbjct: 1 MNPQHVLVTGGSGFIAGHCILHLLEQGHVVRATIRSLAKEATARGV----LRDAGMVHADRLSFVAADLLGDDGWAQAMAGMDIVLHVASPVKPGRVADEDAVIVPAREGTLRVLRATRDAGVRRVVLTSAFHAVGWGHPH---DGHVFTEADWTILDGSG--VDAYAKSKTLAERAAWDFIAAESGGLELTTMLPVAVMGPVMGKDVSGSNHIVQRMLDGAMPVVPNLFIPVVDVRDVASAHVMAMTNPAAAGERFLLSNGPALSLKEIGAIIRSALG------------------DAA--------------KRVPTRALPDFVVRIAARFNAEMRPFVADLGYAKKTSNDKARRVLGWTPRDPREAIVAAAASLV 337
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: UPI0008362E6A (aldehyde reductase n=2 Tax=Nocardia TaxID=1817 RepID=UPI0008362E6A) HSP 1 Score: 266 bits (679), Expect = 8.170e-78 Identity = 159/383 (41.51%), Postives = 223/383 (58.22%), Query Frame = -2 Query: 1395 MSGSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLH--QLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGG-LELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLVEHKVI 2534 M+ VLVTGG GFIAGH +LQLL+ GY+V+ ++ + VRS L DA + LSF ADLT D+GWAEA +VLH+A V V + D+L++PAREG LRVLRAA+ AGV+RVVLTS+ A GWGHP D V EA W+ D P ++ Y K+KTLAE AAWD++ EGG +EL ++LP +GP++ DV S L+ ++L G + ++PNL + IVDVRD AA H+LA+ + A G RF + + ++E+A +RA G + VP R IP+ +VR+G+ FS LR ++ DL A++ S KA +LGW TR+PE+A+I A+S+ ++ Sbjct: 1 MTQQLVLVTGGSGFIAGHCILQLLEHGYRVRTTVRSLRREPAVRSV----LADAGMVSGDTLSFAAADLTHDAGWAEAVADVDFVLHVASPVQPGHVRNEDDLVLPAREGALRVLRAARDAGVERVVLTSAFHAVGWGHPH---DDHVFTEADWTLVDGPG--VDAYAKSKTLAERAAWDFIDAEGGSMELSTLLPVATMGPVMGADVSGSNHLVRALLRGEIPVLPNLFIPIVDVRDVAAAHILAMTTPNAAGQRFLLSNGRAIPMKEIAATIRAHLGDAAD--------------------------------NVPTRGIPNIIVRIGALFSTQLRSIAPDLGYAKKTSNEKARRVLGWQTRNPEDAIITAAQSITAKNLV 342
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: J3D9S5_9BURK (Nucleoside-diphosphate-sugar epimerase n=3 Tax=Herbaspirillum TaxID=963 RepID=J3D9S5_9BURK) HSP 1 Score: 266 bits (679), Expect = 1.050e-77 Identity = 162/374 (43.32%), Postives = 223/374 (59.63%), Query Frame = -2 Query: 1410 GSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLHQLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGG-LELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLV 2528 G VLVTGG GFI H ++QLL++GY+V+ +L +VR+ + H S LSFV ADL D+GWAEA GC +VLH+A P++ H D+L+VPAREGTLRVLRAA+ AGV+RVVLTSS AA G+G P S+ E +W+NPDAP+ + Y K+KTLAE AAWD++A+EGG LEL V P V GP L DV S ++I M+DG M +P ++ IVDVRD A LHLLA+ A G RF + L+E+A +++A G+ AAA +VP R +P+ L+R+ + + ++ +L R+ S +KA +LGW+ RS EEA++A A+SL+ Sbjct: 10 GELVLVTGGSGFIGAHCIVQLLEAGYRVRTTLRSLSREAEVRAML--HAGGVQSDAGLSFVTADLLKDAGWAEAVAGCAFVLHVASPFPASVPKHEDDLIVPAREGTLRVLRAARDAGVRRVVLTSSFAAVGYGMP---DTSQPFTEENWTNPDAPQ--VAAYYKSKTLAERAAWDFIAREGGALELSVVNPVGVFGPALGADVSTSIEIIRRMMDGEMPGLPRITFSIVDVRDVAQLHLLAMTDPAATGQRFLAVAGESIPLQEVARMLKARMGK------------------AAA--------------RVPTRLLPNWLLRVLALLDRSVALVVPELGKVRQVSNDKARRVLGWAPRSNEEAIVASAQSLL 344
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: D5VK66_CAUST (NAD-dependent epimerase/dehydratase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=D5VK66_CAUST) HSP 1 Score: 265 bits (677), Expect = 1.440e-77 Identity = 160/372 (43.01%), Postives = 220/372 (59.14%), Query Frame = -2 Query: 1413 VLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLH--QLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGG-LELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSL 2519 VLVTGG GFIAGH +LQLL+ G+ V++++ VR L+ A +H +LSFV ADL D GWAEA G VLH+A V V D ++VPAREGTLRVLRAA+ AGV+RVVLTS+ A WGHP D V EA W+ D P ++ Y K+KTLAE AAWD++A EGG LEL ++LP V+GP++ KDV + ++ MLDG M ++PNL + +VDVRD A+ H++A+ + A G RF + +SL+E+ +RAA G +AA +VP R +PD +VR+ + F+ +R +DL A++ S +KA +LGW+ R P EA++A A SL Sbjct: 6 VLVTGGSGFIAGHCILQLLEQGHFVRSTIRSLAKEGGVRGV----LEGAGMVHADRLSFVAADLLRDDGWAEAVAGMDVVLHVASPVLPGRVASEDAVIVPAREGTLRVLRAAREAGVKRVVLTSAFHAVSWGHPH---DGHVFTEADWTILDGPG--VDAYGKSKTLAERAAWDFIAAEGGGLELTTMLPVAVMGPVMGKDVSGANHIVQRMLDGAMPVVPNLFIPVVDVRDVASAHIMAMTNPAAAGERFLLSNGRALSLKEIGATIRAALG------------------DAA--------------RQVPTRALPDFVVRIAARFNAEMRPFLHDLGYAKKTSNDKARRVLGWTPREPREAIVAAATSL 336
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: UPI001B0281B8 (Aldehyde reductase n=1 Tax=Solirubrobacteraceae bacterium TaxID=2586742 RepID=UPI001B0281B8) HSP 1 Score: 264 bits (675), Expect = 3.170e-77 Identity = 158/382 (41.36%), Postives = 224/382 (58.64%), Query Frame = -2 Query: 1395 MSGSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLHQLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWV--AQEGGLELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLVEHKVI 2534 M+G VLVTGG GF+ H ++ LL++GY+V+ ++ D+VR+ +K D + + F ADL D+GWAEA G +YVLH+A P H DEL++PAREG LRVLRAA+ A V+RVVLTSS AA G+GH G + EA W++PDAP ++ Y K+KTLAE AAW++V ++E G EL V P +LGP+L D S QL+ +LDG + IP+LS GIVDVRD A LHL A+ A+G RF G S+ ++A++++A G +AA +VP R +P+ LVR+G+ F +R +S++L + + KA +LGW RS E A++A ARSL++ V+ Sbjct: 1 MAGELVLVTGGSGFVGAHCIVALLNAGYRVRTTVRTLAREDEVRAMVKVGGADPSGVE---FAVADLEEDAGWAEAVAGARYVLHVASPFPPAAPDHEDELIIPAREGALRVLRAARGAEVERVVLTSSFAAIGYGHG--GGALRASTEADWTDPDAPG--VSAYAKSKTLAERAAWEFVRESREAGPELAVVNPVAILGPVLGPDQSTSIQLVQRLLDGAVPGIPHLSYGIVDVRDVADLHLRAMIDPAANGERFLAIGEGFASMADIAKILKANLGD-----------------DAA---------------RVPTRTLPNWLVRIGARFDPSIRAISSELGKQKAATNAKARTVLGWQPRSNEAAILATARSLIDLGVV 343
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: A0A3D9YQH6_9HYPH (Dihydroflavonol-4-reductase n=1 Tax=Methylovirgula ligni TaxID=569860 RepID=A0A3D9YQH6_9HYPH) HSP 1 Score: 263 bits (673), Expect = 6.340e-77 Identity = 164/382 (42.93%), Postives = 222/382 (58.12%), Query Frame = -2 Query: 1383 SCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLHQLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEGGLELVSVL-PSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLVEHKVIPPQA 2525 S VLVTGG GFIAGHV++ LL +G++V+ASL AD+V++ ++ D H LSFVEADL D+GW A QGC YV H+A +P + DEL+ PAR+GTLRVLRAA+ AGV+RVVLTSS AA G+GH +A K EA W+N ++PE + Y K+KT+AE AAWD++ EGG +SV+ P V GP+L +S ++I MLDG+M P++ G+VDVRD A LHL A+ +A G RF M + ++A V+R G AAA P R IP+ +VR+ + F LR ++ L I R S KA ++LGWS RS EEA+ A +L+ V+ P+A Sbjct: 2 SKVLVTGGSGFIAGHVIVVLLQAGHEVRASLRNLSRADEVKANVRAGGADPE--HGLSFVEADLNGDAGWDAAAQGCDYVQHVASPLPFEGPENEDELIRPARDGTLRVLRAARDAGVKRVVLTSSFAAVGYGHGNRA---KPFTEADWTNLESPE--VGAYPKSKTIAERAAWDFIQNEGGAPELSVVNPVAVFGPVLGPGAKSSVRIIRMMLDGHMRFAPHMGFGLVDVRDVADLHLRAMTDPKAKGERFIAVAGEPMWMIDVARVLREKFG-----------------PAAAA---------------APRREIPNWIVRLLAPFVPMLRQIAPQLGILRRASNAKARNVLGWSPRSNEEAIAATGEALLRLGVVKPKA 344
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Match: W0ADL5_9SPHN (CoA reductase n=1 Tax=Sphingomonas sanxanigenens DSM 19645 = NX02 TaxID=1123269 RepID=W0ADL5_9SPHN) HSP 1 Score: 263 bits (671), Expect = 1.050e-76 Identity = 157/378 (41.53%), Postives = 219/378 (57.94%), Query Frame = -2 Query: 1410 MSGSCVLVTGGEGFIAGHVLLQLLDSGYQVKASLLCAKNADKVRSKIKRHLKDAASLH--QLSFVEADLTADSGWAEACQGCKYVLHIAGVVPSTPVGHIDELLVPAREGTLRVLRAAKRAGVQRVVLTSSVAACGWGHPLQAGDSKVRREASWSNPDAPEHLINPYQKTKTLAELAAWDWVAQEG-GLELVSVLPSVVLGPLLSKDVPASAQLICSMLDGNMALIPNLSVGIVDVRDAAALHLLALESKEAHGHRFCCTCPGVMSLREMAEVMRAAEGQLEEIHRHKVGLLTLALTNAAA*P*LYYYYYC*C*SKVPCRRIPDALVRMGSWFSGFLRVLSNDLSIAREFSPNKAHDMLGWSTRSPEEAVIACARSLV 2534 MS VLVTGG GFIAGH +LQLL+ G+ V++++ R L+ A +H +LSFV ADL D GWAEA VLH+A V V + D+++VPAREGTLRVLRAA+ AG +RV+LTS+ A WGHP V E W+ D P ++ Y K+KTLAE AAWD++A EG GLEL ++LP V+GP++ KDV S ++ MLDG M ++PNL + +VDVRD A+ H++AL A G RF + ++L+E+ ++RAA G +AA +VP R +PD LVR+ + F+ +R DL A+ S +KA +LGW+ R+P EA++A A S++ Sbjct: 1 MSPQRVLVTGGSGFIAGHCILQLLEQGHLVRSTIRSLAKEATARG----FLEGAGMVHSDKLSFVAADLLHDEGWAEAAADIDVVLHVASPVQPGAVANEDDVIVPAREGTLRVLRAARDAGAKRVILTSAFHAVSWGHPHS---DHVFTETDWTILDGPG--VDAYGKSKTLAERAAWDFIAAEGRGLELTTMLPVAVMGPVVGKDVSGSNHIVRHMLDGAMPVVPNLFIPVVDVRDVASAHIMALTDPAAAGERFLLSNGRALALKEIGAIIRAALG------------------DAA--------------KRVPTRTMPDVLVRVAARFNAGMRPFVPDLGYAKRTSNDKARRVLGWTPRAPREAIVAAATSMI 337 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_101.18.2 >prot_C-australica_Contig_101.18.2 ID=prot_C-australica_Contig_101.18.2|Name=mRNA_C-australica_Contig_101.18.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=347bp MELLVSSALDDASPLPSFFELLMTYQISRSLQPAARHVCRALAERAPILFback to top mRNA from alignment at C-australica_Contig_101:50747..54249- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_101.18.2 ID=mRNA_C-australica_Contig_101.18.2|Name=mRNA_C-australica_Contig_101.18.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3503bp|location=Sequence derived from alignment at C-australica_Contig_101:50747..54249- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_101:50747..54249- >mRNA_C-australica_Contig_101.18.2 ID=mRNA_C-australica_Contig_101.18.2|Name=mRNA_C-australica_Contig_101.18.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1041bp|location=Sequence derived from alignment at C-australica_Contig_101:50747..54249- (Chrysoparadoxa australica CS_1217)back to top |