mRNA_C-australica_Contig_10075.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A2E8MUZ7_9RICK (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8MUZ7_9RICK) HSP 1 Score: 278 bits (710), Expect = 1.180e-92 Identity = 154/202 (76.24%), Postives = 174/202 (86.14%), Query Frame = 1 Query: 4 MSDKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMS--EEEISSTVEKKTESPAPT-VAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 M+DKIKLEILGLSSSQSQSGSFALVLGE G ++RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFAYN +D+KEI ISDLKEGVFF+KI+C N K+ EIDARPSDAIAIGLRF+V+I+T E+ILTEAGI +S EEE++ +K +ES P VAK K+EDLPSDQLNKMLD++L EDYERAAKIRDEINRRN Sbjct: 1 MADKIKLEILGLSSSQSQSGSFALVLGEVGSSRRLPIIIGMFEAQAIAIEIEKITPNRPMTHDLFKSFAYNLGYDIKEIYISDLKEGVFFAKIVCESNGKEFEIDARPSDAIAIGLRFDVDIYTNESILTEAGIVLSDEEEEVTDVKQKYSESVKPEHVAK----KMEDLPSDQLNKMLDEALAQEDYERAAKIRDEINRRN 198
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A654DVP9_9BACT (BFN domain-containing protein n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DVP9_9BACT) HSP 1 Score: 273 bits (697), Expect = 1.120e-90 Identity = 150/201 (74.63%), Postives = 168/201 (83.58%), Query Frame = 1 Query: 4 MSDKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMS--EEEISSTVEKKTESPAPTVAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 M+DKIKLEILGLSSSQSQSGSFALVLGE GGN+RLPIIIGMFEAQAIAIEIE+I PNRPMTHDLFKSFA+N +D+KEI ISDLKEGVFF+KIIC + EIDARPSDAIAIGLRF V+I+T+E+ILTEAGI ++ EEEI+ K T S P KKLEDLPSDQLN MLD++L EDYERAAKIRDEIN+RN Sbjct: 1 MADKIKLEILGLSSSQSQSGSFALVLGEVGGNRRLPIIIGMFEAQAIAIEIEEITPNRPMTHDLFKSFAFNLGYDIKEIYISDLKEGVFFAKIICESGGNQFEIDARPSDAIAIGLRFKVDIYTHESILTEAGIVLTDEEEEITEVKRKSTGSGKPEPVS---KKLEDLPSDQLNSMLDEALAQEDYERAAKIRDEINKRN 198
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A3D9L1Q1_MARFU (BFN domain-containing protein n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L1Q1_MARFU) HSP 1 Score: 270 bits (690), Expect = 1.310e-89 Identity = 148/201 (73.63%), Postives = 169/201 (84.08%), Query Frame = 1 Query: 4 MSDKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEEE--ISSTVEKKTESPAPTVAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 M+DKIKLEILGLSSSQSQSGSFALVLGE G N+RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA+N +D+KEI ISDLKEGVFF+KI C N ++ ++DARPSDAIAIGLRF+V+I+T E+ILTEAGI M++E+ +S K T S P KKLEDLPSDQLNKMLD++L EDYERAAKIRDEIN+RN Sbjct: 1 MADKIKLEILGLSSSQSQSGSFALVLGEVGANRRLPIIIGMFEAQAIAIEIEKITPNRPMTHDLFKSFAFNMGYDIKEIYISDLKEGVFFAKIKCEFNGEEFDVDARPSDAIAIGLRFDVDIYTNESILTEAGIVMTDEDDDVSEPQPKTTRSGKPEPVA---KKLEDLPSDQLNKMLDEALAKEDYERAAKIRDEINKRN 198
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A353WXN7_9BACT (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A353WXN7_9BACT) HSP 1 Score: 258 bits (660), Expect = 5.130e-85 Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 1 Query: 10 DKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEEEISSTVEKKTESPAPTVAKDKPKK--LEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 DK+KLEILGLSSSQSQSGSFALVLGEA G +RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA+ F+F ++EIIISDLKEGVFF+KI+C+ K EIDARPSDAIAIGLRF+V IFTYE IL EAGI +++E T + E P KD K LED +D+L +LD++LKNEDYERAAKIRDE+NRRN Sbjct: 2 DKLKLEILGLSSSQSQSGSFALVLGEATGKRRLPIIIGMFEAQAIAIEIEKIIPNRPMTHDLFKSFAHTFNFTIEEIIISDLKEGVFFAKIVCSDGQKSFEIDARPSDAIAIGLRFSVPIFTYETILAEAGIVLTDEADEDTGDLTEEIPKSETEKDPGTKESLEDFTTDKLKTLLDEALKNEDYERAAKIRDEMNRRN 200
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: UPI00035ECF98 (bifunctional nuclease family protein n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI00035ECF98) HSP 1 Score: 257 bits (657), Expect = 1.330e-84 Identity = 138/198 (69.70%), Postives = 170/198 (85.86%), Query Frame = 1 Query: 10 DKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEE-EISSTVEKKTESPAPTVAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 +KIKL+ILGLSSSQSQSGSFALVLGE+ G +RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA +FDF+V+EI+ISDLKEGVFF+K++C++ K++E+DARPSDAIAIGLRFNV IFTYE +L EAGI +++E E V+ K E A K + ++L+D+ +D+LNKMLD++L EDYE+AAKIRDE+NRRN Sbjct: 2 EKIKLDILGLSSSQSQSGSFALVLGESNGKRRLPIIIGMFEAQAIAIEIEKIIPNRPMTHDLFKSFAQSFDFEVEEIVISDLKEGVFFAKVVCSNGVKQVEVDARPSDAIAIGLRFNVPIFTYETVLAEAGIVLTDETEEEEEVKPKRE--AQKKQKPEREQLKDVSNDKLNKMLDEALAKEDYEKAAKIRDELNRRN 197
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: UPI00197A958D (DUF151 domain-containing protein n=1 Tax=Fulvivirga lutea TaxID=2810512 RepID=UPI00197A958D) HSP 1 Score: 256 bits (655), Expect = 3.050e-84 Identity = 139/207 (67.15%), Postives = 172/207 (83.09%), Query Frame = 1 Query: 10 DKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEE----------EISSTVEKKTESPAPTVAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 DK++LEILGLSSSQSQSGSFALVLGE GN+RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA++FD+ V+EI+ISDLKEGVFF+KI+C + +K IEIDARPSDAIAIGLRF+ IFTYE+IL EAGI +++E E+SSTV+K+ E + K L+D+ D+LN++LD++++NEDYE+AAKIRDE++RRN Sbjct: 2 DKLRLEILGLSSSQSQSGSFALVLGETDGNRRLPIIIGMFEAQAIAIEIEKIIPNRPMTHDLFKSFAHSFDYKVEEIVISDLKEGVFFAKIVCTNGSKSIEIDARPSDAIAIGLRFDAPIFTYESILAEAGIVLTDESEDDISEIKSELSSTVKKEKE-------ESKKGGLKDMSVDKLNELLDEAIENEDYEKAAKIRDELSRRN 201
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A5E7ZIL0_9BACT (BFN domain-containing protein n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E7ZIL0_9BACT) HSP 1 Score: 256 bits (654), Expect = 4.190e-84 Identity = 141/201 (70.15%), Postives = 163/201 (81.09%), Query Frame = 1 Query: 10 DKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEEEISSTVEKKTESPAPTVAKDKPK----KLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 DK+KLEILGLSSSQSQSGSFALVLGE GGN+RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA+NF+F +KEIIISDLKEGVFF KI+C+ +++EIDARPSDAIAIGLRF VEIFTYEAIL EAGI + EE+ T E + +K PK KL+D D+L ++L + L EDYE+AAKIRDE+N+RN Sbjct: 2 DKLKLEILGLSSSQSQSGSFALVLGEVGGNRRLPIIIGMFEAQAIAIEIEKIVPNRPMTHDLFKSFAHNFNFTIKEIIISDLKEGVFFGKIVCSDGFREVEIDARPSDAIAIGLRFGVEIFTYEAILAEAGIVLGEEDEEETDE--APKAKASASKANPKGFMDKLKDFSMDKLQELLTEMLGKEDYEKAAKIRDEMNKRN 200
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A348TSA6_9BACT (BFN domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A348TSA6_9BACT) HSP 1 Score: 254 bits (650), Expect = 1.820e-83 Identity = 143/202 (70.79%), Postives = 168/202 (83.17%), Query Frame = 1 Query: 13 KIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSE--EEISST----VEKKTESPAPTVAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 KIKLEILGLSSSQSQ+GSFALVLGE GGN+RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA +F FDV+EI+ISDLKEGVF++KIIC+ K+E+DARPSDAIAIGLRFNV I+T E+I++EAGI +S+ E SST EKK P T KDK ++E+L SDQL ML+ +LKNEDYE AA++RDE+N+RN Sbjct: 3 KIKLEILGLSSSQSQTGSFALVLGEEGGNRRLPIIIGMFEAQAIAIEIEKIVPNRPMTHDLFKSFAASFHFDVEEILISDLKEGVFYAKIICSDGRNKVEVDARPSDAIAIGLRFNVPIYTVESIMSEAGILLSDITVEESSTENIPAEKKIRKPKQT--KDKNTQIENLSSDQLKTMLEVALKNEDYENAARLRDELNKRN 202
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: A0A239LN12_9BACT (BFN domain-containing protein n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239LN12_9BACT) HSP 1 Score: 253 bits (647), Expect = 3.980e-83 Identity = 133/200 (66.50%), Postives = 163/200 (81.50%), Query Frame = 1 Query: 1 LMSDKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEEEISSTVEKKTESPAPTVAKDKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 + +DKIKLEILGLSSSQSQSGSFALVLGE+GGN+RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFK+F++NFD +KE+ ISDLKEGVFF++IIC H+ K EID+RPSDAIAIGLRFNV+ FT E+I+TEAGI +++E V+K+ P + +EDL S +L K+L D+L EDYE+AA+IRD +N+RN Sbjct: 1 MANDKIKLEILGLSSSQSQSGSFALVLGESGGNRRLPIIIGMFEAQAIAIEIEKIVPNRPMTHDLFKAFSHNFDISIKEVYISDLKEGVFFARIICEHDGKIFEIDSRPSDAIAIGLRFNVDFFTNESIMTEAGIVLTDEYEEEIVQKEASKPEEKTS------IEDLSSSELEKLLTDALDKEDYEKAARIRDVLNKRN 194
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Match: UPI001CE25FD5 (DUF151 domain-containing protein n=1 Tax=Fulvivirga sp. 1062 TaxID=2879465 RepID=UPI001CE25FD5) HSP 1 Score: 253 bits (645), Expect = 9.480e-83 Identity = 137/198 (69.19%), Postives = 163/198 (82.32%), Query Frame = 1 Query: 10 DKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEIEKIAPNRPMTHDLFKSFAYNFDFDVKEIIISDLKEGVFFSKIICAHNNKKIEIDARPSDAIAIGLRFNVEIFTYEAILTEAGIEMSEEEISSTVEKKTESPAPTVAK-DKPKKLEDLPSDQLNKMLDDSLKNEDYERAAKIRDEINRRN 600 DKIKLEILGLSSSQSQ+GSFALVLGE GN+RLPIIIGMFEAQAIAIEIEKI PNRPMTHDLFKSFA++F + V EI+ISDLKEGVFF+KI+C++ + IEIDARPSDAIAIGLRF I+TYE IL EAGI +S+E E KTE + + K + P+ L++ P D+LN ML D+++ EDYERAAKIRDE++RRN Sbjct: 2 DKIKLEILGLSSSQSQAGSFALVLGEEQGNRRLPIIIGMFEAQAIAIEIEKIIPNRPMTHDLFKSFAHSFHYKVLEIVISDLKEGVFFAKIVCSNGEENIEIDARPSDAIAIGLRFEAPIYTYETILAEAGIVLSDEAEDDIAEIKTEIKSSSKGKREDPEDLKNYPMDKLNDMLSDAIEKEDYERAAKIRDELSRRN 199 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10075.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10075.1.1 >prot_C-australica_Contig_10075.1.1 ID=prot_C-australica_Contig_10075.1.1|Name=mRNA_C-australica_Contig_10075.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=200bp MSDKIKLEILGLSSSQSQSGSFALVLGEAGGNKRLPIIIGMFEAQAIAIEback to top mRNA from alignment at C-australica_Contig_10075:21..623+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10075.1.1 ID=mRNA_C-australica_Contig_10075.1.1|Name=mRNA_C-australica_Contig_10075.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=603bp|location=Sequence derived from alignment at C-australica_Contig_10075:21..623+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10075:21..623+ >mRNA_C-australica_Contig_10075.1.1 ID=mRNA_C-australica_Contig_10075.1.1|Name=mRNA_C-australica_Contig_10075.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=600bp|location=Sequence derived from alignment at C-australica_Contig_10075:21..623+ (Chrysoparadoxa australica CS_1217)back to top |