mRNA_C-australica_Contig_1007.9.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1007.9.1

>prot_C-australica_Contig_1007.9.1 ID=prot_C-australica_Contig_1007.9.1|Name=mRNA_C-australica_Contig_1007.9.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=657bp
MHQHMADVYGIAAHPARPFLYCSVSRDTTLRFWSLEGVAGSAKIRSVIDG
GLRSCIGDASACFKAGFHDTLTPVLCGAASQTLSKELCDFRSHSRLVELY
ARLFDFFGGGDGMEELWSIVKTHAALEEGAAIPAGADLPNGLHVLSERVV
HGNELVSKSRDLASRLEARGVFMIGDHRLKRVERLERAANHLLVSGDLRG
YICIMVSLDRWEHALAMAPGVSMEFWRELADQYVEHLSHGEGMASSEAAN
VLPVRLASGRIKKALAWLVEQNDLLGGRTLARAVTEGSYMCAMERNDGEE
GPAAPATAESKLASSSSSGGSKVGGGSDGRGAKHAPAGAKETNGGQAEWQ
DRALDALTQHLADKYAKCGEPILAAAAHLSIQKVSDAIQVLMQGNEVELC
YAITQALRLGLDESDKVIAELARRSEAMDDFPLAAKLLEEMTRKGSPDDF
ITGEYAPQLLIARAAWRGGSEEAPAKLYERFSLRSPEQFSDDGEVHLRRG
DHIAAIRCMVMAGKGERAVGFGLTHLRSCCEDLGCDSEVSRGFITNLLQL
LSCVDATSLPTDLLEELLVYANYLGAIKAGTFGYTTILSRICDNAIELMN
RVCKRQGKNAFPKEMTAGALGLMHARALLAAGQGARDVLIRLRDDKGLGP
KDLEQA*
back to top

mRNA from alignment at C-australica_Contig_1007:5759..10706-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1007.9.1 ID=mRNA_C-australica_Contig_1007.9.1|Name=mRNA_C-australica_Contig_1007.9.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4948bp|location=Sequence derived from alignment at C-australica_Contig_1007:5759..10706- (Chrysoparadoxa australica CS_1217)
GGTGGTGGCAAATGCCTTGCAGTCATGCACCAGCACATGGCCGATGTTTA CGGCATAGCCGCTCACCCTGCCAGACCCTTTCTCTACTGCTCTGTCTCAA GGGACACAACCTTAAGGTAGCGAGCTCCCCTGAGGTGCATTCACCTGCTT TGAAACTAGGGCAGCTGTTAAGGGCAGTTTGAAAGTTGAGAATCTGCTTG TTTGTTTGTGTCGGCTTTCTTTCGATTTGTGGGTAGTCGGCCAGCATTTT ACAGGGACGTGTGCGAGACATGACTGACCATGTAGGTTGCATGCATGGTT AAATGACCTTGACAAATGTACATGTACTGTGGAAAGGTTCTGGTCACTGG AAGGTGTTGCTGGCAGCGCCAAGATCAGATCAGTTATTGATGGCGGCCTA CGCAGCTGCATCGGAGATGCTTCTGCTTGTTTCAAGGTGAACTAATCAAG TCAAACGTTCCTCTATTCCCTCTTCGTCCACAACTTTGACTTACCCTGAC GGGTGGCCTTTTCAAGACCTAGCACCTGATGGTGATTCCCACTAATGATG CATGATAACTGATACCCGTCAGGCTGGCTTTCATGATACCCTCACGCCTG TTTTATGCGGTGCTGCGAGCCAAACCCTCAGCAAAGAGCTGTGTGATTTC AGGAGTCACTCAAGGTATGGTTAAGCTAACCTGAACCCAATGAACCGCTA TCACTCCATCACTTTTTAGAGCATCTCATTTCAATCAATTTTATTGTCCT TAAATCAACCACCATCCCCATGCTCATGGTCATCCCAGGTCACAAGCTTC CTCAGATTTACCCTTAGCCTCACCACTCAACTAGGAGTTTTGCTGACATT TCCCTGGCCTTCCCTATCAGGCTTGTTGAGCTGTATGCACGGCTATTTGA CTTTTTTGGGGGTGGTGATGGCATGGAGGAGCTTTGGTCAATTGTTAAGG TTAGGTTTTTGCCGTAAGCGTTTGATCTAGTCGCACATGCGCCTGGTGAT CCAACCTTAATGACAACCTTAGTGACAATTCAACTCACCTTGACCTTAAT GACAGTTCAGCTCACCTCGACCTTAATCATATCAGACTCATGCAGCACTT GAGGAGGGTGCAGCAATACCAGCTGGGGCGGATCTGCCCAATGGGCTACA TGTGCTATCTGAAAGGTCAGAGAATGATTAAGGGCCTCCTGCGTGATGAG TGAGAAGCCACCCATGCAGCATCACGCCACCATGTAGATGGTAGTGTTAC CTGGGCTAAGCAACAACTGGAAATACTAATGCTCCAGGGTTGTTCATGGC AACGAATTAGTCAGCAAAAGCAGAGACTTGGCTTCGCGCCTTGAAGCAAG AGGTGTCTTCATGATAGGTTTGACTACCTCACCTCAGCTGGAAGCGCCTA GCAGCAGCTCAGCTGTCAAGATGCTTGCGTCAAAACAATGTACATCTCAT GTTAGTTTATGTTACTTTGCACAGGAGATCACCGCCTCAAACGAGTGGAG CGACTTGAGCGCGCGGCTAATCATTTGCTGGTTAGTGGCGACCTCAGGGG TTACATTTGCATCATGGTTTCCCTAGGTGAGTCAGCAGCAGCAAGGACAC CGCACAACTGCAGCTGAGTGGTGGAATAGGGACTAATGGAATAATGAAAT AATAGAGGGAAGGGGCTTGTTGTGTCAGCTGTTTACTGCACTGCCACTAA ACCCTATCCAATAGACCGCTGGGAGCATGCACTGGCTATGGCACCTGGAG TCAGCATGGAGTTCTGGAGAGAACTGGTAATGTATGGGGCATTGGGAATA GATCCCTAGATTGTCGAGGGCAGTTGTAACTAATTAGTCCATGCGTCATG GACTTCTCCATCACTTAAGTAACGGTTATCTCAGGCTGACCAATATGTAG AGCACTTAAGTCATGGGGAGGGCATGGCCTCCAGTGAAGCAGCCAACGTA TTACCAGTGCGCCTGGCCAGTGGCAGAATCAAGAAGGCTTTGGCTTGGTT GGTAAGTCAGAGAGCAACCCAGGTTAACTCCAAGGGTTGTTGAGGGGGGC ACTCCCTGCCGTCTTCCCTGCTCTGTGCTAAGTCACAGGACAGCTGATCA CTGACCAGAAATTGGTAACTGGCCTCAGGTGGAACAGAATGACCTTCTCG GTGGCAGGACATTGGCAAGGGCTGTCACAGAGGGCTCCTATATGTGTGCC ATGGAAAGGAATGATGGGGAAGAGGGCCCAGCAGCTCCAGCAACTGCTGA GTCTAAGTTGGCCTCATCTTCTTCCAGTGGTGGCAGCAAGGTTGGTGGTG GCAGCGATGGCAGGGGAGCAAAGCACGCCCCAGCAGGTGCCAAGGAGGTG TGATATCACTTCGCGCTGATTCATCCTCACCAAGCAGCACGATGCAGAGG CACTGAAGTATCACTGCCTTGGACAAATGAACATACCTCTCATTGATGCC TCTCACTGAGCTCTCATTACGCGATTGACTCTTTGTTGTTTTGACTCATT ATGTAGACAAATGGTGGTCAAGCAGAGTGGCAAGACAGGGCCCTTGATGC CCTTACACAGCACCTGGTGCGCATTTCTGTCAAATAAGACTGCCCTCCCA GCCATGCATCGATGACCTTTCCTCTCCCCACTCTTAATCTGAACTTTGAC CTACCCGCAACAAACCTGGCCCACAGCTCACCCTTCTTTTGGACCCACCC CTAGTCTTCAATCTAAAGCTCAATCGGTGTTGATGGCATTTTCAGGCTGA CAAGTATGCGAAATGTGGGGAGCCAATACTTGCCGCTGCAGCACATCTTT CTATCCAAAAGGCAAGCTCATGTCTGTAACAAGTAGCCAAGCTAACCCTA AGATAGGCATGGCGGGTAAATACTCAGTTGCCGAGTACGTGCGAGAGCAG TAGGGCTGACCATCTAACGTCATTTCTTTCTTGCCTTCCTTTCCCCCTCT GGTGACAGGTGTCGGATGCTATTCAGGTGCTCATGCAGGGCAATGAAGTG GAGCTTTGCTATGCGATAACTCAAGTTAGTATGGGGTTTCCCCCTCATCT GGGCTCAGCTGGCGGAAAACTGAACTTTTGCTTTTGACTTTTGCAGGCCT TGCGTCTTGGATTAGATGAGTCTGATAAAGTCATAGCCGAGCTAGCTAGA AGGAGTGAAGCTATGGGTAAGCCAAGCCAAGCCTTTCTAAATTGTCTTCA TTCCTTCATACATGACCCCGCAACGTTTACAAAGGCAGCCTACGTGGCTA TCTATCAGAAACGCTATTACTCCTTGGTTATCAGTTATTCACAAGATAGA CAAATTAGACAAATGAAATGACTCCAAGCCCTCCCCTGTTGTCACCCTAT GCAGACGACTTCCCTCTGGCGGCTAAGCTGCTGGAGGAGATGACACGAAA GGGCTCCCCCGATGACTTCATTACGGGAGAGTACGCCCCCCAACTGCTAA TTGCAAGAGCTGCATGGAGAGGTATGCATTGGATAACTGGCTACTACTGG CTGCTAGTGGTTCTTTGCCTTCATATATCTCTGCTTCCTGCAGTTTTCCT CCAGCTTGCCAAGAACTTACTCTCAGAGCAAACCCATCCGTTTCTCCATT TGTCCATTTGCAGGTGGCTCTGAAGAGGCACCAGCTAAGCTATATGAACG CTTCTCGCTGCGAAGCCCTGAACAGTTCAGTGATGATGGAGAGGTGGGTC AGTCACTCAGTCATCGGGCATCAGTTGCTCAGTTACTCAGTTACTCAGCA AGCTAGCCTCTTCCCACAACTCATTACCCTATCTCTCATGTCATACAATA GGTGCACCTGCGCAGGGGTGATCATATCGCTGCAATCAGATGCATGGTCA TGGCTGGTAAAGGAGAGAGGGCAGTGGGATTTGGCCTGACTCACTTGAGG AGGTAGAAAATTAAAGCATCTGCCAAACGTTGCTGGACTTCTCTCACCAC AATCTTAATCTCGGTGCATTTACTGGAGTCTCTTCACTCGTCTTCATGTC TTCACTTTCTCTCTTTTGAGCACAATTGCTGTGGTGGCCGGTACCAGCCC AGCAGCTGTCTCCATTCATTGCAGTTGTCGCTAACGACTGGTGGCTCTGC CCTTCTCAGTTGCTGTGAGGATCTAGGCTGCGATAGTGAAGTCTCCAGAG GCTTCATAACAAACCTGCTGCAACTACTGTCATGCGTCGATGCCACGTCA CTCCCTACTGATCTCTTGGAGGAACTCTTGGTATACGCTAACTATCTTGG AGCAATCAAGGTACGGGGGGCTCTTGCCCACCTCAGACGAGCTGCTCTGC CACGTTTTATCCCTCACCACCGCTCACTAGACTCCAGAACCAACTCTGCT CTCTCCTTGCATGTTCCGAGCCAGGCTGGGACCTTCGGCTACACCACAAT TCTCTCACGTATTTGCGACAACGCCATTGAGCTGATGAATCGAGTCTGTA AGCGTCAGGGCAAGGTAATGGGATGTGTAGGGCTCAACTCCTCACTCATA GTTTGGAGTCAACGAGTAATTTGCTTTATTGCAAGCTATATCCTCTGCAA GCTGTACCCTCTTCACGTGTGAGAGAGGTGATGACGATTCTCCGCTGCCA TCACTGCCCCTCTTCATGGCCTTCTCACACCATTCTCTGGCTGGTGCCCC TGCCCGTTGCCGGTCGCCACATGTCAGAACGCATTCCCAAAGGAAATGAC AGCTGGAGCACTCGGCCTAATGCATGCAAGGGCACTACTCGCAGTAAGCT CCTTGCCACCTGCTTCCTTCCCCTCCTCCCTTCTTGTATAGGAGGAGCTC ATCTAATCTCATCTCGCCCCATGTGACACTGAGAACTGATGCACTGCTCT TCTGTTCCTTCCCTCAGGCTGGCCAAGGAGCTCGTGATGTCCTCATCCGA CTCAGAGACGACAAGGGGTTAGGGCCAAAGGACCTAGAACAGGCATGA
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_1007:5759..10706-

>mRNA_C-australica_Contig_1007.9.1 ID=mRNA_C-australica_Contig_1007.9.1|Name=mRNA_C-australica_Contig_1007.9.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1971bp|location=Sequence derived from alignment at C-australica_Contig_1007:5759..10706- (Chrysoparadoxa australica CS_1217)
ATGCACCAGCACATGGCCGATGTTTACGGCATAGCCGCTCACCCTGCCAG
ACCCTTTCTCTACTGCTCTGTCTCAAGGGACACAACCTTAAGGTTCTGGT
CACTGGAAGGTGTTGCTGGCAGCGCCAAGATCAGATCAGTTATTGATGGC
GGCCTACGCAGCTGCATCGGAGATGCTTCTGCTTGTTTCAAGGCTGGCTT
TCATGATACCCTCACGCCTGTTTTATGCGGTGCTGCGAGCCAAACCCTCA
GCAAAGAGCTGTGTGATTTCAGGAGTCACTCAAGGCTTGTTGAGCTGTAT
GCACGGCTATTTGACTTTTTTGGGGGTGGTGATGGCATGGAGGAGCTTTG
GTCAATTGTTAAGACTCATGCAGCACTTGAGGAGGGTGCAGCAATACCAG
CTGGGGCGGATCTGCCCAATGGGCTACATGTGCTATCTGAAAGGGTTGTT
CATGGCAACGAATTAGTCAGCAAAAGCAGAGACTTGGCTTCGCGCCTTGA
AGCAAGAGGTGTCTTCATGATAGGAGATCACCGCCTCAAACGAGTGGAGC
GACTTGAGCGCGCGGCTAATCATTTGCTGGTTAGTGGCGACCTCAGGGGT
TACATTTGCATCATGGTTTCCCTAGACCGCTGGGAGCATGCACTGGCTAT
GGCACCTGGAGTCAGCATGGAGTTCTGGAGAGAACTGGCTGACCAATATG
TAGAGCACTTAAGTCATGGGGAGGGCATGGCCTCCAGTGAAGCAGCCAAC
GTATTACCAGTGCGCCTGGCCAGTGGCAGAATCAAGAAGGCTTTGGCTTG
GTTGGTGGAACAGAATGACCTTCTCGGTGGCAGGACATTGGCAAGGGCTG
TCACAGAGGGCTCCTATATGTGTGCCATGGAAAGGAATGATGGGGAAGAG
GGCCCAGCAGCTCCAGCAACTGCTGAGTCTAAGTTGGCCTCATCTTCTTC
CAGTGGTGGCAGCAAGGTTGGTGGTGGCAGCGATGGCAGGGGAGCAAAGC
ACGCCCCAGCAGGTGCCAAGGAGACAAATGGTGGTCAAGCAGAGTGGCAA
GACAGGGCCCTTGATGCCCTTACACAGCACCTGGCTGACAAGTATGCGAA
ATGTGGGGAGCCAATACTTGCCGCTGCAGCACATCTTTCTATCCAAAAGG
TGTCGGATGCTATTCAGGTGCTCATGCAGGGCAATGAAGTGGAGCTTTGC
TATGCGATAACTCAAGCCTTGCGTCTTGGATTAGATGAGTCTGATAAAGT
CATAGCCGAGCTAGCTAGAAGGAGTGAAGCTATGGACGACTTCCCTCTGG
CGGCTAAGCTGCTGGAGGAGATGACACGAAAGGGCTCCCCCGATGACTTC
ATTACGGGAGAGTACGCCCCCCAACTGCTAATTGCAAGAGCTGCATGGAG
AGGTGGCTCTGAAGAGGCACCAGCTAAGCTATATGAACGCTTCTCGCTGC
GAAGCCCTGAACAGTTCAGTGATGATGGAGAGGTGCACCTGCGCAGGGGT
GATCATATCGCTGCAATCAGATGCATGGTCATGGCTGGTAAAGGAGAGAG
GGCAGTGGGATTTGGCCTGACTCACTTGAGGAGTTGCTGTGAGGATCTAG
GCTGCGATAGTGAAGTCTCCAGAGGCTTCATAACAAACCTGCTGCAACTA
CTGTCATGCGTCGATGCCACGTCACTCCCTACTGATCTCTTGGAGGAACT
CTTGGTATACGCTAACTATCTTGGAGCAATCAAGGCTGGGACCTTCGGCT
ACACCACAATTCTCTCACGTATTTGCGACAACGCCATTGAGCTGATGAAT
CGAGTCTGTAAGCGTCAGGGCAAGAACGCATTCCCAAAGGAAATGACAGC
TGGAGCACTCGGCCTAATGCATGCAAGGGCACTACTCGCAGCTGGCCAAG
GAGCTCGTGATGTCCTCATCCGACTCAGAGACGACAAGGGGTTAGGGCCA
AAGGACCTAGAACAGGCATGA
back to top