mRNA_C-australica_Contig_10063.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A2D4S9W0_9GAMM (Amino acid dehydrogenase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S9W0_9GAMM) HSP 1 Score: 310 bits (795), Expect = 1.410e-102 Identity = 168/248 (67.74%), Postives = 191/248 (77.02%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQGLLR 744 AMGRIV+GL GRYVATEDMGM E+D+A + + T+FAVG SR GGSGDPSPHTA GVFVGMRA +RAAGLG D + VAVQGCGKVGLGLI L+ AGA+V+AADTD GV AAR GA IV ++ILA + +VLAPCAVG VLN+ +IP LRC+ +AGGANNQLA DA RL R IVYAPDFVINAGGVINVGDELA GGY RV RV AIEQTL +IF E+ S TA +AV RAQ +R Sbjct: 96 AMGRIVEGLGGRYVATEDMGMTESDVATMRQETQFAVGMSRRDGGSGDPSPHTAEGVFVGMRAALRAAGLGSDFADVRVAVQGCGKVGLGLIARLVQAGAQVMAADTDEVGVNAARTAGARIVSPDEILAVQAEVLAPCAVGAVLNERSIPGLRCQVIAGGANNQLATPEDASRLKDRGIVYAPDFVINAGGVINVGDELAAGGYDERRVATRVAAIEQTLDDIFREAEHSGSTTAQLAVKRAQRRIR 343
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A2E0IZ68_9GAMM (Amino acid dehydrogenase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E0IZ68_9GAMM) HSP 1 Score: 264 bits (675), Expect = 1.820e-84 Identity = 146/244 (59.84%), Postives = 173/244 (70.90%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQ 732 A+GR V GL+GRYVATEDMGM EADIA+LNEVT AVGRS EAGGSG PSPHTA GV GMRA++RAAG D +GL VAVQGCG VG G+I L+ AGA VIA+D A GA+IVD ++I A D+ APC +G +LN +I L C VAGGANNQLA D +RLA R IVYAPDFVINAGG+INV DEL GY+ ERVR RV +IE TL E+F ++ + T +A+A A+ Sbjct: 91 ALGRAVDGLSGRYVATEDMGMTEADIALLNEVTPHAVGRSLEAGGSGXPSPHTADGVIAGMRASLRAAGRTVDFQGLRVAVQGCGNVGFGVIERLLAAGATVIASDVSQQARERAAGAGAQIVDNDRIHAESADIFAPCGIGAILNAGSIAELGCAIVAGGANNQLAEAEDGERLAARGIVYAPDFVINAGGLINVSDELDSEGYNAERVRFRVASIESTLDEVFAQASAQGETTERVAMAMAK 334
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A2Z3JC92_9GAMM (Leucine dehydrogenase n=2 Tax=Salinisphaera sp. LB1 TaxID=2183911 RepID=A0A2Z3JC92_9GAMM) HSP 1 Score: 262 bits (669), Expect = 5.560e-83 Identity = 140/247 (56.68%), Postives = 173/247 (70.04%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQGLL 741 A+ ++ + GRY+ATEDMGM E+DIA LN+VT FAVGR + GGSGDPSPHTA GV GMR+ +RAAG+ DD L VAVQGCG VG G+I LI GA V A+D D + AR GA I+ + I+ A+VDV APC +G VLN+ +IP +R R +AG ANNQLA +ADA RLA R IVYAPDFVINAGG+INV DE+ P GY +RV RV IE TL EIF E+ S + +A +A+A A + Sbjct: 137 ALADCIERVGGRYIATEDMGMNESDIARLNDVTRFAVGRGLDEGGSGDPSPHTAQGVINGMRSALRAAGMPDDFHSLKVAVQGCGNVGFGVIERLIAQGAEVWASDVDQAAIERARGAGAAIIANDAIITADVDVFAPCGIGAVLNERSIPAIRARVIAGAANNQLATDADAARLAERGIVYAPDFVINAGGLINVADEIDPAGYDSQRVADRVAGIETTLDEIFAEAERSGRTSAEVALALAHARI 383
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: UPI000DBE3B8B (Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Salifodinibacter halophilus TaxID=2723847 RepID=UPI000DBE3B8B) HSP 1 Score: 258 bits (659), Expect = 7.760e-82 Identity = 143/247 (57.89%), Postives = 170/247 (68.83%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQGLL 741 A+ + L GRYVATEDMGM+EADIA LNE T FAVGR+R AGGSGDPSP+TA GV G+RAT AAGL D+ G+SVAVQGCG VGL LI L+ AGARV+AAD + AR GA I+D + IL VDV+APC GGVL++ + L CR VAG ANN L + A LA R I YAPDFVINAGG+INV DELAP GYS RV+ RV I TL +IF E+R ++ +A+ RAQ + Sbjct: 96 AVAEAIASLDGRYVATEDMGMSEADIACLNERTRFAVGRARNAGGSGDPSPYTADGVLAGIRATAMAAGLSADLSGMSVAVQGCGNVGLSLIERLLAAGARVLAADPEVAAAERARAAGANIIDNSVILQQSVDVVAPCGAGGVLDECAVDALNCRVVAGAANNPLTDANLATTLAERGIFYAPDFVINAGGLINVADELAPTGYSSTRVQRRVANIGDTLTDIFAEARHTQATPLAVALDRAQARI 342
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A084INT2_SALHC (Leucine dehydrogenase n=1 Tax=Salinisphaera hydrothermalis (strain C41B8) TaxID=1304275 RepID=A0A084INT2_SALHC) HSP 1 Score: 256 bits (655), Expect = 2.100e-81 Identity = 139/247 (56.28%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQGLL 741 A+ V+ + GRY+ATEDMGM+E+DIA LN+VT FAVGRS GGSGDPSPHTA GV GMR+ +RAAG+ DD GL VAVQGCG VGLG++ L GA V+A+D + + ILAA+VDVLAPC +G VL++ +IPT+R R +AG ANNQLA +ADA RLA R IVYAPDFVINAGGVINV DE+ P GY +RV RV IE TL +IF E+ + Q +A A+A A+ + Sbjct: 97 ALAGFVEHVGGRYIATEDMGMSESDIARLNDVTRFAVGRSLADGGSGDPSPHTAQGVINGMRSALRAAGMSDDFNGLKVAVQGCGSVGLGVVERLRAGGAVVLASDISETAIXXXXXXXXXXXXNDDILAADVDVLAPCGIGAVLSEQSIPTIRARVIAGAANNQLATDADAARLAERGIVYAPDFVINAGGVINVADEIDPAGYDGQRVAARVAGIEATLDDIFAEAARTGQTSAATALALARSRI 343
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A423PUK3_9GAMM (Leucine dehydrogenase n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423PUK3_9GAMM) HSP 1 Score: 256 bits (653), Expect = 4.470e-81 Identity = 147/240 (61.25%), Postives = 167/240 (69.58%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAV 720 A+ R V+ L GRYVATEDMGM+E+DIA+LNEVT AVGRS AGGSGDPSP+TA GV GMRA +RAAG GL VAVQG G VGL +I L+ AGA V+A+D A+ A G+ IVD IL VD+LAPC VGGVLN TIP+L C VAG ANNQLA +AD RLA R IVYAPDFVINAGG+INV DEL P GYS ERVR RV IE TL IF E+ + A A+ Sbjct: 97 ALARAVESLGGRYVATEDMGMSESDIALLNEVTRHAVGRSLAAGGSGDPSPYTADGVIAGMRAALRAAGREPAFDGLRVAVQGAGSVGLAVIERLLAAGASVVASDIAAEPCERASAAGSTIVDNEAILREPVDILAPCGVGGVLNVDTIPSLACPIVAGAANNQLATDADGRRLAERGIVYAPDFVINAGGLINVSDELDPDGYSVERVRFRVAGIESTLNTIFAEAAAHGETPAATAL 336
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: U2EMX0_9GAMM (Leucine dehydrogenase Ldh protein n=2 Tax=Salinisphaera TaxID=180541 RepID=U2EMX0_9GAMM) HSP 1 Score: 254 bits (649), Expect = 1.850e-80 Identity = 143/244 (58.61%), Postives = 173/244 (70.90%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAARELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQ 732 A+GR + GLAGRYVATEDMGM+E+DIA+LNEVT AVGRS EAGGSGDPSPHTA GV GMRA +RAA + GL VAVQGCG VGL ++ LI AGA VIA+D D A GA+IVD ++I A VD+ AP VG +L+++ I L+C VAG ANNQLA D RLA R IVYAPD+VINAGG+INV DEL GY+ ERVR RV +IE TL EIF +++ R+ +A+ A+ Sbjct: 97 ALGRAIDGLAGRYVATEDMGMSESDIALLNEVTPHAVGRSLEAGGSGDPSPHTADGVIAGMRAALRAAERPIEFAGLRVAVQGCGHVGLAIVERLIAAGAEVIASDIDDQACEGAAAAGAQIVDNDRIHAESVDIFAPSGVGAILDESRIAELKCAIVAGAANNQLATPEDGMRLAERGIVYAPDYVINAGGLINVSDELDSEGYNAERVRFRVASIETTLDEIFEQAKAQRRPPESVALDMAK 340
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: UPI001BB817D1 (Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=UPI001BB817D1) HSP 1 Score: 214 bits (546), Expect = 7.630e-65 Identity = 121/245 (49.39%), Postives = 156/245 (63.67%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAAREL-GAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQ 732 A GR+++ L GRYV D+G D+AV+ T +A G ++ GGSGD TA GV++GM+A +AA D++ G +AVQG GKVG L+GHL++ GA+V AAD L G E+VD +L + D+ +P A+G VL++ T+ L+ R V GGANNQLA E D DRLA R I+YAPDFV+NAGGVINV DEL PGGYS R R AI +TL EI ESRE R +T AV A+ Sbjct: 97 AYGRMIESLGGRYVTACDVGTTPDDMAVIKRETRWATGADQQHGGSGDSGVLTAYGVYLGMKAAAQAAFGTDELGGRHIAVQGLGKVGARLVGHLVEEGAKVSAADVSEAACDRVASLPGVEVVDVEDVLLVDADIASPNALGAVLDEPTVAALQARVVCGGANNQLATEDDGDRLAERDILYAPDFVVNAGGVINVADELEPGGYSEARAHRRADAIPRTLHEIIAESREQRVSTERAAVTVAE 341
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A8J3ESB0_9ACTN (Valine dehydrogenase n=1 Tax=Egicoccus halophilus TaxID=1670830 RepID=A0A8J3ESB0_9ACTN) HSP 1 Score: 211 bits (537), Expect = 1.710e-63 Identity = 122/244 (50.00%), Postives = 151/244 (61.89%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAAREL-GAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANEADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARA 729 A GR+++ L GRYV D+G AD+AV+ T +A G GGSGD TA GV++GM+A +AA D + G VAVQG GKVG L+GHL+D GA+V AAD L G EIVD +L + D+++P A+G VL+ TIP L+ R V GGANNQLA E D D LA R ++YAPDFV+NAGG+INV DEL PGGYS R R AI TL EI ESR T G++ RA Sbjct: 97 AYGRVIESLGGRYVTACDVGTTPADMAVVRRETRWATGAEEVHGGSGDSGVLTAYGVYLGMKAAAQAAFGTDALGGRHVAVQGLGKVGARLVGHLVDEGAKVTAADVSTAACEKVASLPGVEIVDVEDVLLVDADIVSPNALGAVLDAGTIPQLQARVVCGGANNQLATEEDGDHLADRGVLYAPDFVVNAGGLINVSDELEPGGYSAARAHQRADAIPATLHEIIAESR-----TQGVSTERA 335
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Match: A0A7W1BPB5_9ACTN (Glu/Leu/Phe/Val dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1BPB5_9ACTN) HSP 1 Score: 207 bits (528), Expect = 3.630e-62 Identity = 123/249 (49.40%), Postives = 153/249 (61.45%), Query Frame = 1 Query: 1 AMGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPHTALGVFVGMRATVRAAGLGDDMRGLSVAVQGCGKVGLGLIGHLIDAGARVIAADTDADGVAAA-RELGAEIVDANQILAAEVDVLAPCAVGGVLNKATIPTLRCRAVAGGANNQLANE-ADADRLAVRRIVYAPDFVINAGGVINVGDELAPGGYSPERVRGRVMAIEQTLAEIFGESRESRQNTAGIAVARAQGLL 741 AMGR V+ AG Y+ ED+ + D+ + +T G S E GG G+P TALG F+G+ A + A D+ G +VAVQG G VG GL HL AGAR++AAD + + V A ELGAE+V + E DVLAPCA+GGVLN TIP LRC VAG ANNQL +E + L R I+YAPD+VINAGGVIN+ EL PGGY PE RV +I +TLAE+F +RE T A A A+ L Sbjct: 96 AMGRFVEDFAGAYITAEDVNVGIPDLRAVRRITSHVTGLSVEEGGGGNPRAATALGCFLGVGAAMLRAAGSADLAGKTVAVQGLGSVGYGLAEHLARAGARLVAADVNRERVERAIAELGAEVVAPEDVYDVECDVLAPCALGGVLNDDTIPRLRCTVVAGAANNQLLDEHRHGEMLRDRGILYAPDYVINAGGVINISCELRPGGYDPELALQRVNSIPKTLAELFARAREQGITTHAAAQALAEAAL 344 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10063.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10063.1.1 >prot_C-australica_Contig_10063.1.1 ID=prot_C-australica_Contig_10063.1.1|Name=mRNA_C-australica_Contig_10063.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=250bp MGRIVKGLAGRYVATEDMGMAEADIAVLNEVTEFAVGRSREAGGSGDPSPback to top mRNA from alignment at C-australica_Contig_10063:2..754+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10063.1.1 ID=mRNA_C-australica_Contig_10063.1.1|Name=mRNA_C-australica_Contig_10063.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=753bp|location=Sequence derived from alignment at C-australica_Contig_10063:2..754+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10063:2..754+ >mRNA_C-australica_Contig_10063.1.1 ID=mRNA_C-australica_Contig_10063.1.1|Name=mRNA_C-australica_Contig_10063.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=750bp|location=Sequence derived from alignment at C-australica_Contig_10063:2..754+ (Chrysoparadoxa australica CS_1217)back to top |