mRNA_C-australica_Contig_10047.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A222E5W7_9RHOB (Bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E5W7_9RHOB) HSP 1 Score: 256 bits (654), Expect = 5.970e-85 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKYA 447
TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIR+LNIDAFIEKYA
Sbjct: 54 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRDLNIDAFIEKYA 202
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A0P7W7Z1_9RHOB (Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Rhodobacteraceae bacterium HLUCCA08 TaxID=1666913 RepID=A0A0P7W7Z1_9RHOB) HSP 1 Score: 225 bits (574), Expect = 1.120e-72 Identity = 132/148 (89.19%), Postives = 139/148 (93.92%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
TIGKMCSIAN ARINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WRRAD VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIK RF AQ+EALQEIA+WDWSR +Y+AALPDIR L+IDAFIEKY
Sbjct: 60 TIGKMCSIANGARINPGNHPTWRAVQHHSVYRAEAYGLGEDDHDFFDWRRADWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKRRFTPAQAEALQEIAVWDWSRARYKAALPDIRALDIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A843YBT9_9RHOB (Chloramphenicol acetyltransferase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A843YBT9_9RHOB) HSP 1 Score: 219 bits (557), Expect = 4.190e-70 Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
TIGK CSIANA RINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WRR + VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPAR IK RF AQ++ALQEIA+WDWSREKY+AALPDIR L IDAFIEKY
Sbjct: 60 TIGKFCSIANATRINPGNHPTWRAVQHHSVYRAEAYGLGEDDHDFFDWRRENWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPAREIKRRFTDAQADALQEIAVWDWSREKYKAALPDIRALEIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A238JAN5_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Pelagimonas phthalicica TaxID=1037362 RepID=A0A238JAN5_9RHOB) HSP 1 Score: 219 bits (557), Expect = 4.470e-70 Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
TIGK CSIANA RINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WRR + VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIK RF AQ+EAL +IA+WDW R+KY+AALPDIR LNIDAFIEKY
Sbjct: 60 TIGKFCSIANATRINPGNHPTWRAVQHHSVYRAEAYGLGEDDHDFFDWRRENWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKRRFSEAQAEALMDIAVWDWPRDKYQAALPDIRALNIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: S9QV44_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Salipiger mucosus DSM 16094 TaxID=1123237 RepID=S9QV44_9RHOB) HSP 1 Score: 218 bits (556), Expect = 6.140e-70 Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
TIGK CSIANA RINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WR+AD VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPAR I+ RF AQ+EALQEIA+WDW RE Y+AALPDIR L+IDAFIEKY
Sbjct: 60 TIGKFCSIANATRINPGNHPTWRAVQHHSVYRAEAYGLGEDDRDFFEWRKADWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARPIRRRFSEAQAEALQEIAVWDWPRETYKAALPDIRALDIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A1X4P0C5_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Marivita cryptomonadis TaxID=505252 RepID=A0A1X4P0C5_9RHOB) HSP 1 Score: 218 bits (555), Expect = 8.710e-70 Identity = 127/148 (85.81%), Postives = 138/148 (93.24%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
+IGKMCSIAN+ RINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WR+AD VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVT+DVAPYTVVGGVPARVIK RF Q+EALQ+IA+WDWSR+ YRAALPDIR L+IDAFIEKY
Sbjct: 60 SIGKMCSIANSTRINPGNHPTWRAVQHHSVYRAEAYGLGEDDHDFFEWRKADWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTKDVAPYTVVGGVPARVIKRRFTEPQAEALQDIAVWDWSRDTYRAALPDIRALDIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A1Y0E811_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Yoonia vestfoldensis TaxID=245188 RepID=A0A1Y0E811_9RHOB) HSP 1 Score: 218 bits (554), Expect = 1.240e-69 Identity = 127/148 (85.81%), Postives = 135/148 (91.22%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
TIGKMCSIANA RINPGNHPTWRA+QHHSVYRAEAYGLG+DD +FF WR+AD VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPAR+IK F Q+EAL EIA+WDWSR+ YRAALPDIR L IDAFIEKY
Sbjct: 60 TIGKMCSIANATRINPGNHPTWRAVQHHSVYRAEAYGLGDDDQDFFAWRKADWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARLIKRGFTPPQAEALMEIAVWDWSRDAYRAALPDIRTLEIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A0J9E4S1_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Candidatus Rhodobacter lobularis TaxID=1675527 RepID=A0A0J9E4S1_9RHOB) HSP 1 Score: 217 bits (552), Expect = 1.800e-69 Identity = 125/148 (84.46%), Postives = 135/148 (91.22%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
+IGKMCSIANA RINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WR+AD VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXX TRDVAPYTVVGGVPARVIK RF Q++ALQ+IA+WDW REKY+AALPDIR L I+AFIEKY
Sbjct: 51 SIGKMCSIANATRINPGNHPTWRAVQHHSVYRAEAYGLGEDDQDFFEWRKADWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXVATRDVAPYTVVGGVPARVIKRRFTPVQADALQQIAVWDWPREKYKAALPDIRALEIEAFIEKY 198
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A2G6IGF9_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Rhodobacterales bacterium TaxID=1948890 RepID=A0A2G6IGF9_9RHOB) HSP 1 Score: 216 bits (551), Expect = 3.420e-69 Identity = 128/148 (86.49%), Postives = 135/148 (91.22%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKY 444
TIGKMCSIAN ARINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WR+AD VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVV GVPAR IK RF AQ++ALQEIA+WDW RE Y+AALPDIR L IDAFIEKY
Sbjct: 60 TIGKMCSIANGARINPGNHPTWRAVQHHSVYRAEAYGLGEDDHDFFEWRKADWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVVGVPAREIKRRFSEAQADALQEIAVWDWERETYKAALPDIRALEIDAFIEKY 207
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Match: A0A2E2JX73_9RHOB (Chloramphenicol acetyltransferase n=1 Tax=Rhodovulum sp. TaxID=34009 RepID=A0A2E2JX73_9RHOB) HSP 1 Score: 216 bits (550), Expect = 4.850e-69 Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 1 Query: 1 TIGKMCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPARVIKHRFDAAQSEALQEIAIWDWSREKYRAALPDIRNLNIDAFIEKYA 447
TIGKMCSIAN+ RINPGNHPTWRA+QHHSVYRAEAYGLGEDD +FF WR+ D VTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPAR IK RF AQ+EAL +IA+WDW RE+Y AALPDIR L+IDAFIEKYA
Sbjct: 60 TIGKMCSIANSTRINPGNHPTWRAVQHHSVYRAEAYGLGEDDHDFFEWRKKDWVTIGHDVWXXXXXXXXXXXXXXXXXXXXXXXXVTRDVAPYTVVGGVPAREIKRRFTEAQAEALMQIAVWDWPRERYAAALPDIRALSIDAFIEKYA 208 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10047.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10047.1.1 >prot_C-australica_Contig_10047.1.1 ID=prot_C-australica_Contig_10047.1.1|Name=mRNA_C-australica_Contig_10047.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=146bp MCSIANAARINPGNHPTWRAIQHHSVYRAEAYGLGEDDTEFFGWRRADHVback to top mRNA from alignment at C-australica_Contig_10047:1..450+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10047.1.1 ID=mRNA_C-australica_Contig_10047.1.1|Name=mRNA_C-australica_Contig_10047.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=450bp|location=Sequence derived from alignment at C-australica_Contig_10047:1..450+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10047:1..450+ >mRNA_C-australica_Contig_10047.1.1 ID=mRNA_C-australica_Contig_10047.1.1|Name=mRNA_C-australica_Contig_10047.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=438bp|location=Sequence derived from alignment at C-australica_Contig_10047:1..450+ (Chrysoparadoxa australica CS_1217)back to top |