mRNA_C-australica_Contig_10041.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A222E179_9RHOB (Phosphoserine phosphatase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E179_9RHOB) HSP 1 Score: 507 bits (1305), Expect = 1.090e-180 Identity = 261/270 (96.67%), Postives = 265/270 (98.15%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 MFIASLI KPGHLD TLVDTLRNALGGGSADWL PDEAAEFPLQTSPANLEEIRTSI DMADLNILP ENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHA+GARCVLVSGGFTAFTSRVSALLGFDE+RANTLLI+DG+LTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG Sbjct: 1 MFIASLITKPGHLDPTLVDTLRNALGGGSADWLCPDEAAEFPLQTSPANLEEIRTSIADMADLNILPAENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHARGARCVLVSGGFTAFTSRVSALLGFDEHRANTLLIKDGKLTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: UPI001C98D772 (phosphoserine phosphatase SerB n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C98D772) HSP 1 Score: 455 bits (1170), Expect = 3.900e-160 Identity = 234/270 (86.67%), Postives = 244/270 (90.37%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 MFIASLIAKPG LD LV+ LRNALGGG+A WLSPDEAAEFPL T P NLE+IR SI DMADLN+LP NRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFE ALIERV LL+GLPE+VIDKVV TRITLMPGGKTLL TMH GARCVLVSGGFTAFTSRVSALLGFDENRANTLL+E+G LTGEVGRPILGREAK+QAL EIT R IT DVIAVGDGANDLGMLGRAGMGVALHAKPSVQA+ DLRVNHG Sbjct: 1 MFIASLIAKPGQLDPALVENLRNALGGGTASWLSPDEAAEFPLDTLPGNLEDIRASIADMADLNLLPAANRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEGALIERVALLKGLPETVIDKVVDTRITLMPGGKTLLATMHGAGARCVLVSGGFTAFTSRVSALLGFDENRANTLLVENGHLTGEVGRPILGREAKVQALEEITTRLTITPEDVIAVGDGANDLGMLGRAGMGVALHAKPSVQAQSDLRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A2K8WAU3_9RHOB (Phosphoserine phosphatase n=2 Tax=Sagittula TaxID=58842 RepID=A0A2K8WAU3_9RHOB) HSP 1 Score: 440 bits (1132), Expect = 2.300e-154 Identity = 223/270 (82.59%), Postives = 241/270 (89.26%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 M IASLIAKPG LDA LVD+LRNA GGG+A WLSPDEAAEFPL+ P N +E+R SIT ADLN++P ENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFE ALIERV LL+GLPESVIDKVV RITLMPGG+TL+DTMHA LVSGGFTAFT+RVSALLGFDENRANTLLI+ G+LTGEVGRPILGREAKI+AL +ITAR ITEAD +AVGDGANDLGML RAGMGVALHAKPSVQA+CDLR+NHG Sbjct: 1 MLIASLIAKPGTLDAALVDSLRNAFGGGTATWLSPDEAAEFPLEVKPGNFDEVRDSITTQADLNLVPAENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEGALIERVALLKGLPESVIDKVVAERITLMPGGQTLIDTMHAASGHAALVSGGFTAFTARVSALLGFDENRANTLLIDAGQLTGEVGRPILGREAKIEALEQITARLGITEADAVAVGDGANDLGMLNRAGMGVALHAKPSVQAQCDLRINHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A6F8Q0A6_9RHOB (Phosphoserine phosphatase n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8Q0A6_9RHOB) HSP 1 Score: 440 bits (1131), Expect = 3.510e-154 Identity = 226/270 (83.70%), Postives = 244/270 (90.37%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 M IASLIAKPG LD LVD+LRNALGGG+ WLSPDEAAEFPL+T+P NL+EIR SI +MADLN+L NRRK+MLLADMDSTMIQQECIDELAEEAGVGAHVK ITARAMNGELDFE ALIERV LL+GLPESVIDKVV++RITLMPGGKTLL TMHA G CVLVSGGFTAFT+RVSALLGFDENRANTLLIE+GELTGEVG PILGREAK+QAL EITAR +I+ DVIAVGDGANDLGML RAG+GVALHAKPSVQA+ DLRVNHG Sbjct: 1 MQIASLIAKPGQLDPALVDSLRNALGGGTVSWLSPDEAAEFPLETTPGNLDEIRASIAEMADLNVLTEANRRKRMLLADMDSTMIQQECIDELAEEAGVGAHVKKITARAMNGELDFEGALIERVALLKGLPESVIDKVVESRITLMPGGKTLLATMHAAGGHCVLVSGGFTAFTTRVSALLGFDENRANTLLIENGELTGEVGHPILGREAKVQALDEITARLEISACDVIAVGDGANDLGMLTRAGLGVALHAKPSVQAQSDLRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A0P1GCL4_9RHOB (Phosphoserine phosphatase n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GCL4_9RHOB) HSP 1 Score: 439 bits (1130), Expect = 4.640e-154 Identity = 226/270 (83.70%), Postives = 238/270 (88.15%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 MFIASLIAKPG LD LVD+LRNA GGG A WLS DEAAEFPL+ PAN EE+R SI ADLNI+P E RRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDF+ AL ERV LL+GLPESVIDKVV RITLMPGGKTLL TMHA G C LVSGGFTAFT RVS LLGFD NRANTL+I+DGELTGEVGRPILGREAKIQAL E +A+Q ITEADV+AVGDGANDLGMLGRAGMGVALHAKPSVQA+CDLRVNHG Sbjct: 1 MFIASLIAKPGQLDPALVDSLRNAFGGGVATWLSMDEAAEFPLEAIPANFEEVRASIAAQADLNIVPAEGRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFDGALTERVALLKGLPESVIDKVVAERITLMPGGKTLLATMHAHGGYCALVSGGFTAFTQRVSGLLGFDVNRANTLIIKDGELTGEVGRPILGREAKIQALKEFSAQQGITEADVLAVGDGANDLGMLGRAGMGVALHAKPSVQAQCDLRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A0B4FKW9_9RHOB (Phosphoserine phosphatase n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=A0A0B4FKW9_9RHOB) HSP 1 Score: 429 bits (1104), Expect = 3.930e-150 Identity = 214/270 (79.26%), Postives = 241/270 (89.26%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 MFI SLIA+PG LDA+LV++LRNA GGG+ WL+PDEAAEFP+ T PA+ + +R + +MADLN++ E RRK+MLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFE ALIERV LL+GLPESVID+VV+TRITLMPGG+TLLD MHAQG C LVSGGFTAFT RV+ALLGFDEN+ANTLL+EDG LTGEVGRPILGREAK+QAL ITAR +T A+VIAVGDGANDLGMLG AGMGVALHAKPSVQA+C+LRVNHG Sbjct: 1 MFIVSLIARPGGLDASLVESLRNAFGGGTVGWLAPDEAAEFPVATRPADFDRVRAEVAEMADLNLVAAEGRRKRMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEGALIERVALLKGLPESVIDRVVETRITLMPGGRTLLDRMHAQGGHCALVSGGFTAFTGRVAALLGFDENQANTLLVEDGTLTGEVGRPILGREAKLQALETITARLGLTPAEVIAVGDGANDLGMLGCAGMGVALHAKPSVQAQCELRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A238JS36_9RHOB (Phosphoserine phosphatase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238JS36_9RHOB) HSP 1 Score: 426 bits (1094), Expect = 1.510e-148 Identity = 218/270 (80.74%), Postives = 239/270 (88.52%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 M IASLIA+PGHLD L D+LRNALGGG+ WL+PDEAAEFPL T+PA+LEEIR SI D ADLN+LP NRRKKMLLADMDSTMIQQECIDELA+ AGVGA VK+ITARAMNGELDFE ALIERV LL+GLP++VID+VV RITLMPGG L+ TM +GA C LVSGGFTAFT+RVSALLGFDENRANTLLIE+ +LTGEV RPILGREAK+QAL EIT +Q ITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQA+C LRVNHG Sbjct: 1 MLIASLIAQPGHLDPALADSLRNALGGGTVTWLAPDEAAEFPLDTAPAHLEEIRASIADRADLNLLPAANRRKKMLLADMDSTMIQQECIDELADVAGVGARVKEITARAMNGELDFEGALIERVSLLKGLPDTVIDQVVAERITLMPGGPELIATMKREGAWCTLVSGGFTAFTARVSALLGFDENRANTLLIENAKLTGEVARPILGREAKVQALEEITRQQGITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAQCALRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A7W6DM07_9RHOB (Phosphoserine phosphatase n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6DM07_9RHOB) HSP 1 Score: 417 bits (1073), Expect = 1.990e-145 Identity = 214/270 (79.26%), Postives = 231/270 (85.56%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 MFIASLIAKPG LD LV++LRNA GG WL+PDEAAEF L P+N +E+R S+ ADLNI+P ENR KKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFE ALIERV LL+GLPESVIDKVV RITLMPGGK L+ MHA G LVSGGFTAFT RVSALLGFDENRANTL+I DGELTGEV RPILG++AK+ AL +IT R +ITEADVIAVGDGANDLGML RAGMGVALHAKPSVQAECDLR+NHG Sbjct: 1 MFIASLIAKPGTLDPALVESLRNAFGGADVVWLAPDEAAEFALPARPSNFDEVRDSVAAQADLNIVPIENRAKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEGALIERVALLKGLPESVIDKVVADRITLMPGGKELIAQMHANGGHAALVSGGFTAFTQRVSALLGFDENRANTLVIADGELTGEVVRPILGKQAKVDALEQITERLEITEADVIAVGDGANDLGMLNRAGMGVALHAKPSVQAECDLRINHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: UPI0010A4DBE1 (phosphoserine phosphatase SerB n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A4DBE1) HSP 1 Score: 415 bits (1066), Expect = 2.770e-144 Identity = 213/270 (78.89%), Postives = 233/270 (86.30%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 M I SLIA+PG LDA LV+ LRNA GGG+A WLSPDEAAEFP++ P+NL ++R SI D ADLN+LPTENRRK+MLLADMDSTMIQQECIDELAEEAGVG VKDITARAMNGELDFE ALIERV LL+GLPE+VID VV RITLMPGG+ LL TM A G LVSGGFTAFT+RVSALLGFDENRANTLLIED L+GEVGRPILGREAKI AL +ITAR I+EADVIAVGDGANDLGMLGRAG+GVALHAKP+VQ + D RVNHG Sbjct: 1 MHIVSLIARPGKLDAALVENLRNAFGGGTATWLSPDEAAEFPVEAIPSNLSDVRASIADQADLNVLPTENRRKRMLLADMDSTMIQQECIDELAEEAGVGERVKDITARAMNGELDFEGALIERVALLKGLPENVIDTVVANRITLMPGGRELLATMKANGGHAALVSGGFTAFTTRVSALLGFDENRANTLLIEDDTLSGEVGRPILGREAKIDALEQITARIGISEADVIAVGDGANDLGMLGRAGLGVALHAKPTVQEQSDCRVNHG 270
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Match: A0A1P8UUV6_9RHOB (Phosphoserine phosphatase n=2 Tax=Salipiger abyssi TaxID=1250539 RepID=A0A1P8UUV6_9RHOB) HSP 1 Score: 413 bits (1062), Expect = 1.050e-143 Identity = 213/270 (78.89%), Postives = 234/270 (86.67%), Query Frame = 1 Query: 1 MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLEEIRTSITDMADLNILPTENRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKDITARAMNGELDFEAALIERVKLLQGLPESVIDKVVQTRITLMPGGKTLLDTMHAQGARCVLVSGGFTAFTSRVSALLGFDENRANTLLIEDGELTGEVGRPILGREAKIQALAEITARQDITEADVIAVGDGANDLGMLGRAGMGVALHAKPSVQAECDLRVNHG 810 M+I SLIA+PG LD LV LRNALGGG A WL+ EAAEFPL+T PANLEE+R +I D ADLN+LP E RRKKMLLADMDSTMIQQECIDELAEEAGVGAHVK+ITARAMNGELDFE AL ERV LL+ LPESVI+KV+ RITLMPGGK L+ TM AQGA LVSGGFTAFT+RV+AL+GFDENRANTLL E G L+G+V RPILGREAKIQAL EITAR ++EADV+AVGDGANDLGMLGRAG GVALHAKPSVQA+CDLRVNHG Sbjct: 1 MYIVSLIARPGALDPALVSALRNALGGGEAVWLARGEAAEFPLETLPANLEELRGAIADQADLNLLPAEGRRKKMLLADMDSTMIQQECIDELAEEAGVGAHVKEITARAMNGELDFEGALTERVALLKDLPESVIEKVLDARITLMPGGKVLVATMKAQGAYTALVSGGFTAFTARVAALVGFDENRANTLLTEGGRLSGDVARPILGREAKIQALEEITARLGLSEADVLAVGDGANDLGMLGRAGFGVALHAKPSVQAQCDLRVNHG 270 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10041.1.1 >prot_C-australica_Contig_10041.1.1 ID=prot_C-australica_Contig_10041.1.1|Name=mRNA_C-australica_Contig_10041.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=270bp MFIASLIAKPGHLDATLVDTLRNALGGGSADWLSPDEAAEFPLQTSPANLback to top mRNA from alignment at C-australica_Contig_10041:3..812- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10041.1.1 ID=mRNA_C-australica_Contig_10041.1.1|Name=mRNA_C-australica_Contig_10041.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=810bp|location=Sequence derived from alignment at C-australica_Contig_10041:3..812- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10041:3..812- >mRNA_C-australica_Contig_10041.1.1 ID=mRNA_C-australica_Contig_10041.1.1|Name=mRNA_C-australica_Contig_10041.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=810bp|location=Sequence derived from alignment at C-australica_Contig_10041:3..812- (Chrysoparadoxa australica CS_1217)back to top |