mRNA_C-australica_Contig_10012.3.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: A0A222E2J6_9RHOB (Metal-dependent hydrolase n=5 Tax=Rhodobacterales TaxID=204455 RepID=A0A222E2J6_9RHOB) HSP 1 Score: 233 bits (593), Expect = 1.560e-74 Identity = 121/130 (93.08%), Postives = 123/130 (94.62%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALAE 390 QIKRKAAKFRAEAMVM AIEAAGEGRVLELPMGMPFRAGVEKAGADH LFVIHPRG+DW LTTIRVGDDTFDNRADLP AWAGLTDAALE ASGV G+KFCHNGRFIAVAASREAILKMADIAV EALAE Sbjct: 179 QIKRKAAKFRAEAMVMAAIEAAGEGRVLELPMGMPFRAGVEKAGADHRLFVIHPRGEDWALTTIRVGDDTFDNRADLPVAWAGLTDAALEIASGVPGAKFCHNGRFIAVAASREAILKMADIAVAEALAE 308
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: A0A0J5T8U8_9RHOB (Uncharacterized protein n=1 Tax=Puniceibacterium sp. IMCC21224 TaxID=1618204 RepID=A0A0J5T8U8_9RHOB) HSP 1 Score: 228 bits (582), Expect = 7.250e-73 Identity = 117/130 (90.00%), Postives = 122/130 (93.85%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALAE 390 QI RKAAKFRAEAMVM AIEAAGEGRVL+LPMGMPFRA VEK GADHLLFVIHPRG DWTLTTIRVGDDTFDNRADLPAAWAGLTDAALE ASGV G+KFCHNGRFIAVA+SREA+L+MADIAV EALAE Sbjct: 179 QINRKAAKFRAEAMVMNAIEAAGEGRVLDLPMGMPFRAAVEKTGADHLLFVIHPRGSDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALENASGVAGAKFCHNGRFIAVASSREAVLRMADIAVAEALAE 308
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: UPI001110F7BB (MYG1 family protein n=1 Tax=Roseovarius arcticus TaxID=2547404 RepID=UPI001110F7BB) HSP 1 Score: 224 bits (572), Expect = 2.370e-71 Identity = 115/129 (89.15%), Postives = 122/129 (94.57%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALA 387 QI+RKAAKFRAEAMV+ AIEAAGEGRVLELPMGMPFRAGVE AGADHLLFVIHPRG DWTLTTIR+GDDTFDNRADLPAAWAGLTD ALEAASGV G+KFCHNGRFIAVAAS EA+LKMA+IAV +ALA Sbjct: 179 QIRRKAAKFRAEAMVVAAIEAAGEGRVLELPMGMPFRAGVENAGADHLLFVIHPRGTDWTLTTIRLGDDTFDNRADLPAAWAGLTDEALEAASGVLGAKFCHNGRFIAVAASHEAVLKMANIAVADALA 307
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: UPI000DEA5F38 (MYG1 family protein n=1 Tax=Pelagivirga dicentrarchi TaxID=2250573 RepID=UPI000DEA5F38) HSP 1 Score: 224 bits (572), Expect = 2.840e-71 Identity = 114/129 (88.37%), Postives = 120/129 (93.02%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALA 387 QIKRKAAK+RAEA+VM AIEAAG GRVLELPMGMPFRAGVEK G DHLLFVIHPRG DW LTTIR+GDDTFDNRADLPAAWAGLTDAALE ASGV G+KFCHNGRFIAVAASR+A+LKMADIAV EALA Sbjct: 179 QIKRKAAKYRAEALVMAAIEAAGAGRVLELPMGMPFRAGVEKVGGDHLLFVIHPRGTDWALTTIRIGDDTFDNRADLPAAWAGLTDAALEVASGVKGAKFCHNGRFIAVAASRDAVLKMADIAVAEALA 307
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: A0A1H2XSR6_9RHOB (Uncharacterized protein, UPF0160 family n=1 Tax=Roseicitreum antarcticum TaxID=564137 RepID=A0A1H2XSR6_9RHOB) HSP 1 Score: 224 bits (570), Expect = 4.760e-71 Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALA 387 Q++RKAAKFRAEAMVMTAIEAAG GRVLELPMGMPFRAGVE+AGADHLLFVIHPRG DWTLTTIR GDDTFDNRADLPAAWAGLTD ALEA SGV G+KFCHNGRFIAVAA+R A+L MADIAV+EALA Sbjct: 179 QVRRKAAKFRAEAMVMTAIEAAGAGRVLELPMGMPFRAGVEQAGADHLLFVIHPRGTDWTLTTIRTGDDTFDNRADLPAAWAGLTDGALEAVSGVKGAKFCHNGRFIAVAATRAAVLAMADIAVSEALA 307
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: UPI00067CE263 (MYG1 family protein n=1 Tax=Pseudorhodobacter wandonensis TaxID=1120568 RepID=UPI00067CE263) HSP 1 Score: 223 bits (567), Expect = 1.360e-70 Identity = 112/130 (86.15%), Postives = 121/130 (93.08%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALAE 390 QI+RKAAK RAE MVM AI AAG+GRVL+LPMGMPFRAGVEKAGADHLLF +HPRG DWTL+TIRVGDDTFDNRADLPAAWAGLTDAALE ASGV G+KFCHNGRFIAVAASREA+L+MAD+AV EALAE Sbjct: 179 QIRRKAAKLRAETMVMAAITAAGDGRVLDLPMGMPFRAGVEKAGADHLLFAVHPRGDDWTLSTIRVGDDTFDNRADLPAAWAGLTDAALETASGVVGAKFCHNGRFIAVAASREAVLQMADLAVAEALAE 308
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: UPI000D38D7EC (MYG1 family protein n=1 Tax=Oceaniglobus ichthyenteri TaxID=2136177 RepID=UPI000D38D7EC) HSP 1 Score: 221 bits (563), Expect = 5.800e-70 Identity = 112/130 (86.15%), Postives = 121/130 (93.08%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALAE 390 QIKR+AAKFRAE+MVM AIEAAG+GR+LELPMGMPFRAGVEKAGADHLLFVIHPRG DW LTTIR GDDTF+NRADLPAAWAGLTD AL+ ASGV G+KFCHNGRFIAVAASREAILKMAD AV +ALA+ Sbjct: 179 QIKRRAAKFRAESMVMAAIEAAGDGRILELPMGMPFRAGVEKAGADHLLFVIHPRGTDWALTTIRQGDDTFENRADLPAAWAGLTDEALQMASGVAGAKFCHNGRFIAVAASREAILKMADAAVADALAQ 308
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: A0A1M7CRG4_9RHOB (Uncharacterized protein, UPF0160 family n=2 Tax=Roseovarius TaxID=74030 RepID=A0A1M7CRG4_9RHOB) HSP 1 Score: 218 bits (556), Expect = 6.270e-69 Identity = 111/129 (86.05%), Postives = 119/129 (92.25%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALA 387 QIKR+AAKFRAE+MVM AIE AGE RVLELPMGMPFRAGVE+AGADHLLFV+HPRG DWTLTTIR+G DTFDNRADLP AWAGLTD ALE ASGV G+KFCHNGRFIAVAA+REAIL+MADIAV EALA Sbjct: 179 QIKRRAAKFRAESMVMAAIEVAGEARVLELPMGMPFRAGVEQAGADHLLFVVHPRGSDWTLTTIRLGGDTFDNRADLPVAWAGLTDDALEVASGVAGAKFCHNGRFIAVAATREAILEMADIAVVEALA 307
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: A0A1I1WX04_9RHOB (Uncharacterized protein, UPF0160 family n=1 Tax=Sulfitobacter brevis TaxID=74348 RepID=A0A1I1WX04_9RHOB) HSP 1 Score: 216 bits (550), Expect = 5.070e-68 Identity = 110/129 (85.27%), Postives = 119/129 (92.25%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALA 387 QIKRKAAKFRAE MVMTAI+AAG G +LELPMGMPFRAGVEKA ADHLLFVIHPRG DWTLTTIRVGDDTF++RA+LPAAWAGLTD+ALE ASGV G+KFCHNGRFIAVA SR+AI+ MA IAVTEALA Sbjct: 179 QIKRKAAKFRAETMVMTAIQAAGTGHILELPMGMPFRAGVEKANADHLLFVIHPRGSDWTLTTIRVGDDTFESRAELPAAWAGLTDSALEEASGVNGAKFCHNGRFIAVAGSRDAIMAMAKIAVTEALA 307
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Match: UPI0018E64549 (MYG1 family protein n=1 Tax=Pontibaca salina TaxID=2795731 RepID=UPI0018E64549) HSP 1 Score: 216 bits (550), Expect = 5.380e-68 Identity = 111/129 (86.05%), Postives = 119/129 (92.25%), Query Frame = 1 Query: 1 QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFVIHPRGKDWTLTTIRVGDDTFDNRADLPAAWAGLTDAALEAASGVTGSKFCHNGRFIAVAASREAILKMADIAVTEALA 387 Q+KR+AAK+RAEAMVM AIE AGE VLELPMGMPFRAGVEK+GADHLLFVIHPRG DW LTTIR GDDTF NRADLP AWAGLTDAALEAASGVTG+KFCHNGRFIAVA +REA+L+MADIAVTEALA Sbjct: 179 QVKRRAAKYRAEAMVMAAIEEAGEWPVLELPMGMPFRAGVEKSGADHLLFVIHPRGSDWALTTIRKGDDTFANRADLPKAWAGLTDAALEAASGVTGAKFCHNGRFIAVADNREAVLQMADIAVTEALA 307 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10012.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10012.3.1 >prot_C-australica_Contig_10012.3.1 ID=prot_C-australica_Contig_10012.3.1|Name=mRNA_C-australica_Contig_10012.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=131bp QIKRKAAKFRAEAMVMTAIEAAGEGRVLELPMGMPFRAGVEKAGADHLLFback to top mRNA from alignment at C-australica_Contig_10012:453..845- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10012.3.1 ID=mRNA_C-australica_Contig_10012.3.1|Name=mRNA_C-australica_Contig_10012.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=393bp|location=Sequence derived from alignment at C-australica_Contig_10012:453..845- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10012:453..845- >mRNA_C-australica_Contig_10012.3.1 ID=mRNA_C-australica_Contig_10012.3.1|Name=mRNA_C-australica_Contig_10012.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=393bp|location=Sequence derived from alignment at C-australica_Contig_10012:453..845- (Chrysoparadoxa australica CS_1217)back to top |