mRNA_C-australica_Contig_1000.7.6 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA) HSP 1 Score: 372 bits (955), Expect = 5.390e-124 Identity = 198/369 (53.66%), Postives = 254/369 (68.83%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLK-QLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFGVSNSGAGQNISTGERRF 1104 NTCYCNSV+Q+LYFC PL+ +LL + S + + + PA SL L F + + K ++G + P F++TLRE NELFRGNMQQDAHEF+NF+IND++DTL+ ++ D+ G + AAP TW+H +F+GVLTNET+C+CCET+++RDE FVDL LDIEQN SV+ACLRNFS+ ETLTG NKF+CETCC LQEA+K+M L++LP VLTLHLKRFKY+E IQ+FSKLSHRVVFP EL++PNM ++ +AD LY LFAVVVHIGRG NHGHYVA+VKS+GRW+LFDD+LVE+VDE+VL + FG+SN G + +TG F Sbjct: 35 NTCYCNSVMQALYFCGPLRTELLARHTQNSSATVMATGSSQYPAG--------SLLYQLAELFAV-------------ITNTKRLSGRVAPQAFMQTLRETNELFRGNMQQDAHEFYNFIINDMADTLLRMSA------DKSG--------------------DQAAPKTTWIHDLFQGVLTNETKCICCETVTHRDEPFVDLPLDIEQNCSVTACLRNFSRMETLTGCNKFFCETCCALQEAEKRMCLRRLPRVLTLHLKRFKYMEQIQNFSKLSHRVVFPLELRMPNMARDSAADADGILYHLFAVVVHIGRGLNHGHYVAVVKSQGRWMLFDDDLVEVVDEAVLHKVFGLSNH-LGGSTNTGYLLF 355
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI) HSP 1 Score: 335 bits (858), Expect = 1.610e-107 Identity = 204/465 (43.87%), Postives = 253/465 (54.41%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSE---GSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAK-----------------------------------------------------KVAN-------------------------------------------------------EGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVK-EADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFGVS 1059 NTCYCNSVLQ+LYFC PL+ L Q E G S + +S L S ++ QK +G+L P++FLRTLRE+NELFRGN QQDAHEFFNF++N+++D++V K K+++ EG+ G G G + E +TW+H +F+GVLTN+T+CLCCET+SNRDE F+DLSLD+EQNSSVSACLRNFS TETLT KNKF+CETC LQEA+K+++LK+LP VLTLHLKRFKYVE +++FSKLSHRVVFP EL+ PNMT + +AD RLY LFAVVVHIGRGPNHGHYVA+VKS GRWLLFDDE+VELV+E VL QCFG++ Sbjct: 35 NTCYCNSVLQALYFCEPLRHHLAQVREEDTSGGXXXXXXXXXXXXXXXXSGKTVLSELAELFSS----------------ISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVVARRKLREEAATVQEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRSSTWSKMSSFKGSFGNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGESAAGVDGGGGNARGNRRTSDGANESGG--ETWVHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRNFSSTETLTKKNKFFCETCYALQEAEKKIRLKRLPRVLTLHLKRFKYVESLENFSKLSHRVVFPLELRTPNMTDAAGEADADGRLYRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQVLKQCFGLA 481
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A9RF40_PHYPA (Predicted protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9RF40_PHYPA) HSP 1 Score: 321 bits (823), Expect = 5.450e-104 Identity = 172/351 (49.00%), Postives = 224/351 (63.82%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P ++ L++ + + + L C L F+ Q+ QK TG + P F++ +R++NELFR M QDAHEF NFL+N++ D LV+ A+ + SP G GA G N EP + TW+H +F+G LTNETRCL CETI+ RDETF+DLSLDIEQNSS+++CLRNFS TETL ++KF+C+ CC+LQEA K+MK+K P +L LHLKRFKY+E + + KLS+RVVFP ELKL N T + E Y+LFAVVVH+G GPNHGHYV++VKS WL FDDE VE++DES++ FG Sbjct: 30 NTCYCNSVLQALYFCVPFREQLLEYCGQKKPVAESEENL------------------LTCLSEL--------FT--QINSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNFLLNELVDILVKEAQAANSNSGSHTSPEKVVGNGATNGLANGNHKEP---VVTWVHKIFQGTLTNETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDA--PGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESIVQTFFG 347
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A176W0E8_MARPO (USP domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0E8_MARPO) HSP 1 Score: 320 bits (821), Expect = 1.130e-103 Identity = 175/352 (49.72%), Postives = 224/352 (63.64%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTG-ANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P + L++ S T D L C L F+ Q+ QK TG + P F++ ++++NELFR M QDAHEF NFL+N++ D L + AK + + P ANG G+ NG P P+ TW+H +F+G LTNETRCL CETI+ RDETF+DLSLDIEQNSS+++CLRNFS TETL ++KF+C+ CC+LQEA K+MK+K P +L LHLKRFKY+E + + KLS+RVVFP ELKL N T + E Y+LFAVVVH+G GPNHGHYV++VKS WL FDDE VE++DESV+ FG Sbjct: 32 NTCYCNSVLQALYFCVPFRDQLLEHASRSKGSGETDDNL------------------LTCLSEL--------FT--QINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAKASSKPTSGQVHPDKLANGTANGI----ANGNHPH-PVVTWVHKIFQGTLTNETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDA--PGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESVVQTFFG 348
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A484MYH1_9ASTE (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Convolvulaceae TaxID=4118 RepID=A0A484MYH1_9ASTE) HSP 1 Score: 318 bits (816), Expect = 8.260e-103 Identity = 170/355 (47.89%), Postives = 234/355 (65.92%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVAN--EGDEKGSPTGANGAGAGVGAL--GENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P ++ L++ S +++L +D++ L AD Q++ QK TG + P F++ L+++NE+FR M QDAHEF N+L+N+ LV++ +K +N + D + SP+ N A L G P+ TW+H F+G+LTNETRCLCCET++ RDETF DLSLDIEQNSS+++CL+NFS TETL ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKY+E + + KLS+RVVFP ELKL N V+EAD Y+LF+VVVH+G GPNHGHYV++VKS WL FDD+ VE++DES + FG Sbjct: 30 NTCYCNSVLQALYFCVPFREQLLEYYS-NNKNLADADES-----------------------LLTCLADLF----MQISSQKKKTGVIAPRRFVQKLKKQNEIFRSYMHQDAHEFLNYLLNE----LVDILEKESNAAKSDRETSPSSENVANGPKAILSNGHTNGNHKEPLVTWVHKNFQGILTNETRCLCCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT----VEEADAE-YSLFSVVVHVGTGPNHGHYVSLVKSHNHWLFFDDDSVEMIDESAVQTFFG 347
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A804JXV6_MUSAM ((wild Malaysian banana) hypothetical protein n=4 Tax=commelinids TaxID=4734 RepID=A0A804JXV6_MUSAM) HSP 1 Score: 318 bits (814), Expect = 1.160e-102 Identity = 179/374 (47.86%), Postives = 239/374 (63.90%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTG--ANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFGVSNSGAGQNISTGERRFPPSL 1116 NTCYCNSVLQ+LYFC P ++ L+ S +++L ++ L L FT Q++ QK TG + P F++ ++++NE FR M QDAHEF NFL+N+++D L E A + E SP+ ANG + NG P P+ TW+H F+G+LTNETRCL CET++ RDETF+DLSLDIEQNSS+++CL+NFS TETL ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKYVE + + KLS+RVVFP ELKL N ++ E Y+LFAVVVH+G GPNHGHYV++VKS WLLFDDE VE++DES++ FG S +G N G F SL Sbjct: 32 NTCYCNSVLQALYFCIPFREQLLYYYS-NNKNLGDVEENLLTC--------------LADLFT-------------QISSQKKKTGVIAPKRFVQRVKKQNEYFRSYMHQDAHEFLNFLLNELADIL-EKESDAAKDSIETSSPSEKLANGPNHSL----PNGV-PKEPLLTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYVEQLGRYKKLSYRVVFPMELKLNNTVEDIDSE-----YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLLFDDENVEMIDESMVQTFFGSSQEYSG-NTDNGYILFYESL 365
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: U5CXE6_AMBTC (USP domain-containing protein n=10 Tax=Magnoliopsida TaxID=3398 RepID=U5CXE6_AMBTC) HSP 1 Score: 317 bits (812), Expect = 1.980e-102 Identity = 174/353 (49.29%), Postives = 226/353 (64.02%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTG--ANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P ++ L++ D L C L FS Q+ QK TG + P F++ ++++NELFR M QDAHEF NFL+N++ D L E A E SP+ ANG +L NG + P+ TW+H F+G+LTNETRCL CET++ RDETF+DLSLDIEQNSS+++CLRNFS TETL ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKY+E + + KLS+RVVFP ELKL N V++AD Y+LFAVVVH+G GPNHGHYV++VKS WL FDDE VE++DES + FG Sbjct: 30 NTCYCNSVLQALYFCVPFREQLLEYYGNNKTQGDADDNL------------------LTCLAEL--------FS--QICSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDIL-EKESNAAKASPETSSPSEKTANG----PRSLQPNGVQKE-PLVTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT----VEDADSE-YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFG 343
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A2G9G885_9LAMI (Ubiquitin-specific protease n=2 Tax=Lamiales TaxID=4143 RepID=A0A2G9G885_9LAMI) HSP 1 Score: 317 bits (811), Expect = 3.090e-102 Identity = 172/357 (48.18%), Postives = 227/357 (63.59%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVS------EGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P ++ L++ S EG ++L L C L FS Q++ QK TG + P F++ +R++NE+FRG M QDAHEF N+L+N + D L + + K NE G G NG +P P+ TW+H F+G+LTNETRCL CET++ RDETF+DLSLDIEQNSS+++CL+NFS TETL ++KF+C+ CC+LQEA K+MK+KK P +L +HLKRFK++E + KLS+RVVFP ELKL N V++AD Y+LFAVVVH+G GPNHGHYV++VKS WL FDDE VE++DES + FG Sbjct: 38 NTCYCNSVLQALYFCVPFREQLLEYYSNNKNQGEGDENL------------------------LTCLAEL--------FS--QISSQKKKTGVIAPKRFVQRVRKENEVFRGYMHQDAHEFLNYLLNKLVDILEKESHKDTNEVVSNGPSNGH-----------VNGVKPEPPV-TWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPRILVIHLKRFKFMEQLNRHKKLSYRVVFPLELKLSNT----VEDADTE-YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAIQTFFG 343
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A0K9RIK7_SPIOL (USP domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=A0A0K9RIK7_SPIOL) HSP 1 Score: 317 bits (811), Expect = 3.190e-102 Identity = 165/351 (47.01%), Postives = 228/351 (64.96%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P ++ L++ S + + + L C L F+ Q++ QK TG + P F++ L+++NELFR M QDAHEF NFL+N++ D L + A+ ++ + S ANG + P P+ TW+H F+G+LTNETRCL CET++ RDETF DLSLDIEQNSS+++CL+NFS TETL ++KF+C+ CC+LQEA K+MK+K+ P++L +HLKRFKY+E + + KLS+RVVFP ELKL + V+++D R Y+LFAVVVH+G GPNHGHY+++VKS WL FDDE VE++DES + FG Sbjct: 30 NTCYCNSVLQTLYFCVPFREQLLEYYSNNKKAVDAEENL------------------LTCLADL--------FT--QISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQSAKDDQETLPSEKAANGP-----TNTQVYASPKEPLVTWVHKSFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKRPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL----SDTVEDSD-REYSLFAVVVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMIDESAVQTFFG 342
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A0K9QYR6_SPIOL (USP domain-containing protein n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QYR6_SPIOL) HSP 1 Score: 316 bits (810), Expect = 4.370e-102 Identity = 168/351 (47.86%), Postives = 230/351 (65.53%), Query Frame = 1 Query: 1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053 NTCYCNSVLQ+LYFC P + L++ + PA P+ ++ L C L F+ Q++ QK TG + P F++ +R++NELFRG M QDAHEF NFL+N++ D L + + + + S ANG G+ NG + P+ TW+H F+G+LTNET+CL CET++ RDETF DLSLDIEQNSS+++CL+NFS TETL ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKY+E++ + KLS+RVVFP ELKL N ++ E Y+LFAVVVH+G GPNHGHYV++VKS WL FDDE V+++DES + FG Sbjct: 30 NTCYCNSVLQALYFCVPFRDKLLEYYEKNKN----------PAD---PEENL-----LTCLADL--------FT--QISSQKKKTGVIAPKRFVQRVRKENELFRGYMHQDAHEFLNFLLNELVDILEKESSAAKDSSENSSSDKIANGPRNGL----ANGVQKE-PLVTWVHKNFQGILTNETKCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIENLGRYKKLSYRVVFPLELKLTNTMEDADSE-----YSLFAVVVHVGTGPNHGHYVSLVKSHNHWLFFDDENVDIIDESAVQTFFG 342 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1000.7.6 >prot_C-australica_Contig_1000.7.6 ID=prot_C-australica_Contig_1000.7.6|Name=mRNA_C-australica_Contig_1000.7.6|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=375bp MQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSback to top mRNA from alignment at C-australica_Contig_1000:15008..16895- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1000.7.6 ID=mRNA_C-australica_Contig_1000.7.6|Name=mRNA_C-australica_Contig_1000.7.6|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1888bp|location=Sequence derived from alignment at C-australica_Contig_1000:15008..16895- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1000:15008..16895- >mRNA_C-australica_Contig_1000.7.6 ID=mRNA_C-australica_Contig_1000.7.6|Name=mRNA_C-australica_Contig_1000.7.6|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1125bp|location=Sequence derived from alignment at C-australica_Contig_1000:15008..16895- (Chrysoparadoxa australica CS_1217)back to top |