mRNA_C-australica_Contig_1000.2.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A7R9UAR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAR1_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.670e-26 Identity = 143/538 (26.58%), Postives = 244/538 (45.35%), Query Frame = 1 Query: 25 VRGAIMELLLKSINAPGPNLSHVLLGLA--DTVKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQPGFVDSS---PVLAEQCMQLVFRLCTTRGMALPVLQLLRGNSIDFFYSHLRDLVGSGRARCRDSFARH-GMAWLLQGVAVELHVCCTGEPPYPS--KARRLLALL-------------YGGHADDAALLQQRMCFMLEVLADMDI-DEAGPVGS--PDGRTMEAIRECSKP----LETG-----GGGSQRQFEVIDIKALR-----------------ALQRAGVPAQGDDSSRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLL----VDNAQVARQGSGSSGKRILVSLLSAALKKICAHPN-ADVVLVEPIAHSCLSIMGTLRGLGA-AGVLSIGEG--QALLQHMLEAICARGGAGGSKMLCAHLFGCLLHFLQHSQAP--YVAGGDLSSVGAVGVAYEDLVEAHALCAETQQQYSTQLEPFIDRLVEMLGRDTTCGVPVCESLAFSLLAALMR 1458 +R I++L++++++AP PNLSH LLGLA D+ SAG G V +C +A+L +L +PG V+S+ P +AE+ +++ +L R PV ++LR S+DFF S L + SF R + +L+ +++LH + P A RL+ +L + G + + + C +L +L + + +EAG + P T + + CS+ E G G G ++F ID++AL AL G+ + S + +L WA+ WN F R + + R +VEV + SC LL + + V + SG+ +L+ L IC H + ADV L+EP + + LS++G++R A V S+G G Q LL+ + +A+ G G S+ +L L+ L+ +Q P + G+ G ++ L AE ++ + L ++ L +L +D V +S+A S L ++ Sbjct: 559 LRELILDLIIENMDAPFPNLSHSLLGLATADSAGVTSAGRGLGPPVP-----GCPRHCFDAILEML-EPGGVNSAFSDPKVAEKAFRVILQLLQLRLE--PVSRILRSRSVDFFPSMLMYVASWEYDGLASSFFRRLCLGHVLRACSIDLHARGVSDDPDVGGEAAARLVHMLLDVAPESLGRDTSFSGDLEGSRTNLAQHCLLLRLLHRIPLLEEAGLASARAPSPITRDILESCSRTGGVAAEFGVSSDLGFGLDQRFRFIDLEALAEHLYQVLPTQQPAGQGLALTPGGLAGASNGES-MRSALNWANAWNEFSGRALASGYALECHRVLVEVVMTSCRSLLHPTILGSVSVPSSRTLDSGRLLLLLALGLG-NHICDHVDRADVSLLEPPSRALLSVVGSMRLPDPRASVESLGPGRTQQLLRDLCKALLH--GQGSSEAFRGNLTAALVQCLRLTQGPSALIGEGEQGEQGGHSIS--------RLLAENRRLNNQVLSSVVEPLTHVLMKDALSASLVYQSVAVSALTLMLE 1076
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: D7FNG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG5_ECTSI) HSP 1 Score: 113 bits (282), Expect = 6.820e-23 Identity = 77/252 (30.56%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 778 RIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKRILVSLLSAALKKICAHPNADVVLVEPIAHSCLSIMGTLRGLGAAGVLSIGEGQALLQHMLEAICARGG----------AGGSKMLCAHLFGCLLHFLQHSQ-------------APYVAGGDLSSVG--AVGVAYEDLVEAHALCAETQQQYSTQLEPFIDRLVEMLGRDTTCGVPVCESLAFSLLAALMR 1458 R+ +L WA WN +ASQSHLC +WRQV+EV+ + LL + + S +R+L +LL L+K+ AD L++P+ +CLS+ G +R LGA L + E + L+ +L+ + G GSK A L+GCL+H L+H+Q AP ++ G A +++ L E H L + ++ Q+EP L ML D+ V + L SLL++++ Sbjct: 4 RVRTALNWAIHWNIHTDNLASQSHLCQAWRQVLEVAFINAPQLLFGPREDPSKAVAS--RRLLPALLLGMLRKLTGMGGADDKLLKPLGRACLSVAGVMRDLGAWAPLQLAESKQLISSLLQCLAGTKGLVASSMENTPGDGSKTYRAFLYGCLIHLLEHTQGEPHADWFLGVRAAPGAGSAAETAAGRPATSLSHAALREGHRL--QNRELLREQIEP----LAHMLNEDSRYAPDVTQCLGLSLLSSIVN 247
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A6H5L557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L557_9PHAE) HSP 1 Score: 103 bits (256), Expect = 1.490e-19 Identity = 93/327 (28.44%), Postives = 141/327 (43.12%), Query Frame = 1 Query: 592 MDIDEAGPVGSP-DGRTMEAIRECSKPLETGGGGSQ---RQFEVIDIKALRALQRAGVPAQG----------DDSSRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKRILVSLLSAALKKICAHPNADVVLVEPIAHSCLSIMGTLRGLGAAGVLSIGEGQALLQHMLEAICARGGAG--------GSKMLCAHLFGCLLHFLQHSQAPYVA---GGDLSSVGAVGVAYEDLVEAHALCAETQQQYSTQ-------------LEPFIDRLVEMLGRDTTCGVPVCESLAFSLLAALMR 1458 +++ GP +P D + + PL GG ++ F +ID L L RA + ++G + R+ +L WA WN +ASQSHLC +WRQV+EV+ S LL + + S +R+L +LL L+K+ AD L++P+ +CLS+ A GV E L+ + RG A GSK A L+GCL+H L+H+Q A GG ++ GA G A E A Q++ L I+ L ML D+ V + L SLL++++ Sbjct: 86 IELGGCGPARNPGDSGVRSLLIRAAIPLPAPGGCAEAGGEDFRIIDAAHLHELLRAEIASRGLGAEGATLSREMDERVRTALNWAIHWNIHTDNLASQSHLCQAWRQVLEVAFISAPQLLFGPREDPSKAVAS--RRLLPALLLGMLRKLTGMGGADDKLLKPLGRACLSV-------AAGGV----EAADLVSPAVPGWYGRGXASSKENTPGDGSKTYRAFLYGCLIHLLEHTQGEPHADWFGGVRAAPGA-GSAAETATGRPATSLVRQKRGMAXXXXXXXXEHAGELLREQIEPLAHMLNEDSRYAPDVTQCLGLSLLSSIVN 398
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A0L0DLW1_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLW1_THETB) HSP 1 Score: 101 bits (252), Expect = 6.150e-19 Identity = 146/557 (26.21%), Postives = 225/557 (40.39%), Query Frame = 1 Query: 28 RGAIMELLLKSINAPGPNLSHVLLGLADTVKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQPGFVDSSPVLAEQCMQLVFRLCTTRGMALPVLQLLRGNSIDFF---YSHLR----------DLVGSGRARCRDSFARHGMAWLLQGVAVELHVCCTGEPPYPSKARRLLALLYGG----------------------HADDAALLQQRMCFMLEVLADM-DIDEAGPVGSPDGRTMEAIRECSKPLETGGGGSQRQFEVIDIKAL-RALQRA----------------GVPAQGDDSSRIAHSL-QWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLL-----------VDNAQVARQGSGSSGKRILVSLLSAAL----KKICAHPNADVVLVEPIAHSCLSIMGTLRGLGAAGVLSIGEGQALLQHMLEAICARGGAGGSKMLCAHLFGCLLHFLQHSQAPYV---------AGGDLSSVGAVGVAYEDLVEAHALCAETQQQYSTQLEPFI---DRLVEMLGRDTTCGVPVCESLAFSLLAALM 1455 R A++ELLL S+NAP P+++H+L G + GL VS + NCL +L L A P FV P LAE +LV L +T + LQLLR +D+F Y+ LR D+ R R + +W+L+ +A+ELHV + +A RLL LY H + + + Q RM +LEVL + ++DE P P E + + G E D+ AL R L A GV + D++ + H L A++WN + +R ++ + T+W Q+V +L C LL V ++ + G G S K + S+ S L K + ++ P+ H + LRG+ AA LL+H G ++ +L+ L+ +LQ +Q AG L+ A G E A AL + S + + L+++L RD + G V ++LAFS L L+ Sbjct: 1011 REAVLELLLVSLNAPYPSMTHLLCGFE-----LERGLAASRLVSI------AHNCLNILLQLAADPEFVVYFPTLAEGTARLVHALVSTPATSTATLQLLRSRDVDYFEGAYAVLRTAYTIEPELPDVSAGPVLRLRYT------SWILKSIALELHVAGGPNTVHRPQAVRLLTALYSSSEPRQRGEPGALPSFWDAAASAHGEASGVEQARMK-LLEVLYSLQEVDEVEPP-FPSIPLDEGLVATTISKNAAG------VECFDVPALYRVLMAAPHLRAGMMPGTGMSEMGVGDESSDAASVVHQLVAAAADWNGYHERFMARVEVMTAWSQIVLATLARCYELLGSESRESILFMVLDSLLFLLGRGVSAKAVARSMTSVVLAILSKLLQVQVSSRQTTHVPVNH----LHALLRGILAA----------LLRH-----------GSDQVQRGNLYAALMAYLQLTQPDVTLSAKHLGEDAGSSLNE-SAWGEP-ESRAPAEALASRRSAIASGNAKIVAAAGEALLDVLCRDASHGKQVWQALAFSALNVLV 1515
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A7S4W5F5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W5F5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.780e-16 Identity = 96/375 (25.60%), Postives = 151/375 (40.27%), Query Frame = 1 Query: 25 VRGAIMELLLKSI-NAPGPNLSHVLLGLADTVKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQPGFV--DSSPVLAEQCMQLVFRLCTTRGMA-----------LPVLQLLRGNSIDFFYSHLRDLVGSGRARCRDSF---------------------------ARHGMAWLLQGVAVELH-----------------VCCTGEPPYPSKARRLLALLYGGHADDAALLQQRMCFMLEVLADMDIDEAGPVGS---PDGRTMEAIRECSKPLETGGGGSQRQFEVIDIKALRALQRAGVPAQGDDSSRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKRIL 966 VR I++LLL ++ +A NLSH LLGL+ + A S NCL+AVL+LL+ FV + A +C +L++R+C+ L + LR + DF+ HL + F H +AWLL+G+AVELH + T P P + +++L +L+ + ML L D+ + ++ + E ++E L TG + +EV+D+ L + R A GD+ ++A LQWAS WN +V + SHL T+W V+ +L C LL + + + S RIL Sbjct: 581 VRDVILDLLLSNVGSADDQNLSHALLGLSGSDGATR-----------------SKNCLDAVLDLLSNTDFVLNPQTSSYAAKCYELIYRVCSIANSVNQSSSRVWSAKLDFMSKLRNS--DFWRKHLLRFFAPSQLSSVSLFHGIVSTANLYDQHQGNQISPLLSRNIDVLHSIAWLLRGIAVELHSLMGLSASHSPCYVRTNIQPTTVAPQPRQCQKILHILFSNPHE----------VMLNALIDLPLHQSDTITQFLDVTAPARELVQESCATL-TGAREVAKGYEVVDVDKLLSNVRN---ASGDE--KVA--LQWASAWNAYVTYSCASSHLSTAWSMVLGTALVVCRPLLFGDEHILDSSTTLSESRIL 918
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A7S1YVX3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YVX3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.940e-16 Identity = 96/375 (25.60%), Postives = 151/375 (40.27%), Query Frame = 1 Query: 25 VRGAIMELLLKSI-NAPGPNLSHVLLGLADTVKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQPGFV--DSSPVLAEQCMQLVFRLCTTRGMA-----------LPVLQLLRGNSIDFFYSHLRDLVGSGRARCRDSF---------------------------ARHGMAWLLQGVAVELH-----------------VCCTGEPPYPSKARRLLALLYGGHADDAALLQQRMCFMLEVLADMDIDEAGPVGS---PDGRTMEAIRECSKPLETGGGGSQRQFEVIDIKALRALQRAGVPAQGDDSSRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKRIL 966 VR I++LLL ++ +A NLSH LLGL+ + A S NCL+AVL+LL+ FV + A +C +L++R+C+ L + LR + DF+ HL + F H +AWLL+G+AVELH + T P P + +++L +L+ + ML L D+ + ++ + E ++E L TG + +EV+D+ L + R A GD+ ++A LQWAS WN +V + SHL T+W V+ +L C LL + + + S RIL Sbjct: 1531 VRDVILDLLLSNVGSADDQNLSHALLGLSGSDGATR-----------------SKNCLDAVLDLLSNTDFVLNPQTSSYAAKCYELIYRVCSIANSVNQSSSRVWSAKLDFMSKLRNS--DFWRKHLLRFFAPSQLSSVSLFHGIVSTANLYDQHQGNQISPLLSRNIDVLHSIAWLLRGIAVELHSLMGLSASHSPCYVRTNIQPTTVAPQPRQCQKILHILFSNPHE----------VMLNALIDLPLHQSDTITQFLDVTAPARELVQESCATL-TGAREVAKGYEVVDVDKLLSNVRN---ASGDE--KVA--LQWASAWNAYVTYSCASSHLSTAWSMVLGTALVVCRPLLFGDEHILDSSTTLSESRIL 1868
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A165IAB1_EXIGL (Uncharacterized protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165IAB1_EXIGL) HSP 1 Score: 92.4 bits (228), Expect = 5.700e-16 Identity = 139/550 (25.27%), Postives = 224/550 (40.73%), Query Frame = 1 Query: 25 VRGAIMELLLKSINAPG---PNLSHVLLGLADTVKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQ--PGFVDSS------------PVLAEQCMQLVFRLCTTRGMALPVLQLLRGNSIDFFYSHL-----RDLVGSG----------------RARCRDSFARHGMAWLLQGVAVELHVCCTGEPPYPSKARRLLALLYGGHADD--------------AALLQQRMCFMLEVLADMDIDEAGPVGSPDGRTMEAIR--ECSKPLETGGGGSQRQFEVIDIKALRALQ---RAGVPAQGDDSSRIAHSLQWASEWNTFVQRMASQSHL----CTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKRILVSLLSAALKKICAHPNADVVLVEPIAHSCLSIMGTLRGLGAAGVLSIGEGQALLQHMLEAICARGGAGGSKMLCAHLFGCLLHFLQHSQAPYVAGGDLSSVGAVGVAYEDLVEAHAL---CAETQQQYSTQLEP--------FIDRLVEMLGRDTTCGVPVCESLAFSLLAALMR 1458 ++ A++ LL++ APG P+++H LLG GG + + + +CL +L L+Q P + PVLAE+ +LV +LCT A P L+ LR DFF HL R + G G +A R + AW+L+ VA+ELHV E P +A RLL L++G ++ A+ R+ L+ LA +D P + + + C +P E G +V D+ AL AL A +P G ++ ++ E R S H +W +VV+V+L + AR + + +L +L A + + V EP+A + ++++ LR Q +LQ L A GA + L A LF +L + AP + G+L S + Y LVEA ++++ T+LE F+DRL+ + +D G V +++AF+LL +L+R Sbjct: 881 IKSAVVGLLIQG-TAPGCAAPSVAHFLLGY-------DCHAGGEAILQDPEAAHARISCLHVILAALSQGVPRLDNQHHRTVGTPLSVLVPVLAEKFYRLVLQLCTHPLTAAPTLRYLRTRE-DFFARHLAAVPARIVTGGGGEGDGMVVYEDGSSVQQAGARATAFLRARAWILELVALELHVLTDPEHPQLQRAARLLELIFGTDTEEQGSGLQEEFLQPFVASRHASRVVEALQALAMEWVDATQPEQGVELQVYRGLNFDTCLRPDEAG-------CDVYDVGALLALLGSVTATIPI-GGGRDQLRRETRFVLETVAAENRARSLQHARGLGYAAWARVVQVAL---------SKGFARLLPPEAREAVLFDVLPALPGPL---RRMEPVAAEPLAQTLVALVARLR--------EDRRHQTVLQASLGAEDVGAGALPADRLLA-LFRAVLDCVMVPGAPGMVRGNLYSTL---IHYLHLVEAEKALHRATDSEEDARTELEAGTLAIVNAFVDRLIPEICKDAIDGAEVWKTVAFTLLDSLVR 1389
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A8B8AJV1_CRAVI (nuclear pore complex protein Nup205-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AJV1_CRAVI) HSP 1 Score: 86.7 bits (213), Expect = 3.620e-14 Identity = 128/554 (23.10%), Postives = 227/554 (40.97%), Query Frame = 1 Query: 28 RGAIMELLLKSINAPGPNLSHVLLGLADTVKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQ-------PGFVDSSPVLAEQCMQLVFRLCTTRGMALPVLQLLRGNSIDFFYSHLRDLVGSGRARCRDSFARHGMAWLLQGVAVELHVCCTGEPPYPSKARRLLALL---------------------YGGHADDAA----LLQQRMCF--------MLEVLADMDIDEA-GPVGSPDGRTMEAIRECSKPLETGGGGSQRQFEVIDIKAL-RALQRAGVPAQGDDS--------SRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGG----------LLVDNAQVARQGSGSSGKR---------ILVSLLSAALKKICAHPNADVVLVEPIAHSCLSIMGTLRGLGAAGVLSIGEG---------QALLQHMLEAICARGGAGGSKMLCAHLFGCLLHFLQHSQAPYVAGGDLSSVGAVGVAYEDLVEAHALCAETQQQYSTQLEPFIDRLVEMLGRDTTCGVPVCESLAFSLLAALM 1455 R ++++LL+S++ P PNL+H+LLG D K+V+ L G LG+ CL AVL+LL + P + +P LAE +L++ L + + P L+ LR + DF Y L+ L + + R +WL++ +A+EL + S +RL+ L Y AD + L Q F +L +L ++D + P + I + + +ET ++++ D++ L R L QG+ + + LQ N Q + S+ +WRQV EV L C +L++ Q +Q I+++L++ + C P + E A L+++ + GLG + G Q +L+ +++ I +GG + + A+L+G LL++LQ +Q P G GV L +AH+ + +++ + + D ++M+ RD G V LA S+L ++ Sbjct: 254 RQYLLQVLLRSLDQPAPNLAHLLLGF-DIRKSVAKTL----LQDPGILGS-PKTCLHAVLSLLERGVGSHSGPSCLRDTPRLAELAYKLIYLLAANKETSTPTLRYLR-TTRDFLYRQLQHLPFTQQFYKRPVMV--AQSWLMKLIAIELRLTALNRQR--SHTQRLMRALLDDGSEGHTVFQPVGEDTDLGYDRFADQSTQMSYLSQTNTPFRSRQVRRKLLGLLDEVDFSQRYPPTMHLEFFDQSLIEQAIQSVETR---TEQEVLYCDVRRLHRVLMNELNNYQGNIMVTQRPRVLEEVENILQHVVRRNRIRQELYSKQQALEAWRQVTEVLLTGCPEDHLTPQDRQTVLLELLQELQQKVTEEDTLTELTAPVAGIILTLMTNLRQCFCPDP-----VTEDEASQVLTLLDSTGGLGQSAAWGQKAGSRTQFASSLQLVLRGVIDHILL--SSGGQQRVRANLYGALLYYLQIAQKPKSLTHSDPESGGDGVGKRILADAHSEYEQLRRENVATILSYGDNFMDMVCRDACDGHDVGRMLALSVLDTIL 786
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: A0A7S4I8C0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I8C0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 4.220e-14 Identity = 92/340 (27.06%), Postives = 131/340 (38.53%), Query Frame = 1 Query: 181 SSNCLEAVLNLLAQPGFV--DSSPVLAEQCMQLVFRLCTT---RGMALPVLQLLRGNSIDFFYSHLRDLV-----GSGRAR---------CRDSF------------ARHGMAWLLQGVAVELH--------VCCTGEP----------PYPSKARRLLALLYGGHADDAALLQQRMCFMLEVLADMDIDEAGPVGSPDGRTMEAIRECSKPLETGGGGSQRQFEVIDIKALRALQRAGVPAQGDDS---------------SRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKR-ILVSLLSAALKKICA 1005 S NCLEA L+L++ FV + LA +C +L +RLC + RG+ LPVL LR D++ H L+ G G R C S H +AWLL+G+AVELH +P P PS+ R L+ L+ G A + +D++ P P A P + GG ++D + L L RA Q D S + ++ WA WN + + SHL W ++ +L SC LL D+ G G KR +LV L AL ++ A Sbjct: 1687 SDNCLEAALHLVSDLNFVLDPRTSSLAARCYELAYRLCDSSDVRGVRLPVLLKLR--VADYWIEHASRLLSGPIEGGGAQRQSVLSFISACASSADSATSLTRSQCDVLHSIAWLLRGMAVELHSLTGLSLPASVADDPGLADLRAAAAPQPSRCCRTLSFLFSGPTFAVARALTDLPLATPPFT-LDLERGTP---PQALIRAATGVLEGPRDVCGG-----HRIVDCRVLLKLLRASHQGQQDGSPLDTSTAFPSSSPSTDQEREAIAWADGWNLYSSYSCATSHLSGGWEELTGSALASCRSLLFDDEAHLSSGGGEVLKREMLVELTCLALSRLVA 2015
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Match: I1BR80_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BR80_RHIO9) HSP 1 Score: 79.7 bits (195), Expect = 6.290e-12 Identity = 105/450 (23.33%), Postives = 187/450 (41.56%), Query Frame = 1 Query: 25 VRGAIMELLLKS--INAPGPNLSHVLLGLADT-VKAVSAGLGGRFTVSEGKLGAGSSNCLEAVLNLLAQ--------------------PGFVDSSPVLAEQCMQLVFRLCTTRGMALPVLQLLRGNSIDFFYSHLRDLVG-------------SGRARCRDS------FAR-----HGMAWLLQGVAVELHVCCTGEPPYPSKARRLLALLYGGHADD--------AALLQQRMCFMLEVLADM------DIDEAGPVGSPDGRTMEA-IRECSKPLETGGGGSQRQFEVIDIKALRALQRAGVPAQGDDS-------SRIAHSLQWASEWNTFVQRMASQSHLCTSWRQVVEVSLHSCGGLLVDNAQVARQGSGSSGKRILVSLLSAALKKICAHPNADVVLVEPIAHSCLSIMGTLR---GLGAAGVLSIGEGQALLQHMLEAICAR 1158 VR AI++LLL++ + P L+ LLG T V++ + + + + +CL ++L++L Q F+D+ P+LAE+C +L+++LC + ++L L+ LR N +FFY + SG C D F R H AWLLQ +A+ELH E + +LL LLYG + + LQQ + MLE ++ + D+ + G + R +A I E L G +V DI+A+ R ++ +S + + L N + ++ H +W+QVV ++L C L+ S ++I+ LL+ L K+ + D +++ ++ L+++ LR + L + + + + +LE IC + Sbjct: 1038 VRLAILDLLLENARLKTNSPTLTEYLLGYKLTNVRSP--------VLQDTETNRITLSCLHSILSMLQQGTENSSANGDSMMVDLSESSQPFIDTHPLLAEKCYELIYQLCAKQSISLSTLRYLR-NREEFFYKQFEIMSSRFETDLFVESSPFSGTICCADGTEIQSDFFRVRAKLHQRAWLLQSIALELHTTACMEQK--ANIYKLLELLYGRSPESMPDQGFFSSRGLQQPLVKMLEFVSSLEFLWQDDLTKDGAIAET--RYFKAFIPENFYTLNKEG------VQVYDIRAMYTFLRTVQVSEYKESIETDLIENEMGEILAACMALNRIKEINYAKRHCMKAWKQVVHITLLECFDLI----------HVSDREKIIYELLTMLLSKMLSTQGYDTEMLKSMSEVVLALLNRLRREKNMRTIAQLPVEKLRHVFNGILECICQK 1458 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1000.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1000.2.1 >prot_C-australica_Contig_1000.2.1 ID=prot_C-australica_Contig_1000.2.1|Name=mRNA_C-australica_Contig_1000.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=486bp AQADGGDCVRGAIMELLLKSINAPGPNLSHVLLGLADTVKAVSAGLGGRFback to top mRNA from alignment at C-australica_Contig_1000:4745..7644+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1000.2.1 ID=mRNA_C-australica_Contig_1000.2.1|Name=mRNA_C-australica_Contig_1000.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2900bp|location=Sequence derived from alignment at C-australica_Contig_1000:4745..7644+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1000:4745..7644+ >mRNA_C-australica_Contig_1000.2.1 ID=mRNA_C-australica_Contig_1000.2.1|Name=mRNA_C-australica_Contig_1000.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1458bp|location=Sequence derived from alignment at C-australica_Contig_1000:4745..7644+ (Chrysoparadoxa australica CS_1217)back to top |