mRNA_C-australica_Contig_100.1.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 464 bits (1193), Expect = 1.720e-153 Identity = 246/425 (57.88%), Postives = 301/425 (70.82%), Query Frame = 2 Query: 335 PGSKACTRPEPYNRILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQG---NQKRNRRQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNRINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQTKSTSKVCLSAVNVISDGSGRHGVGGGFSKTLVRSATATQIV--------GRQDNEEPKGKKKG-GLARTFSKFGRMIIGKKGSKEEAAATLTHTAPETRGLTDGKGHLARRALSDG 1573 PGS Y + W EL + Y+T GAMCEI+SAE G KVA+K+PR DCEEP VAEHDLEVELDVL + HKHI+ LIGAG + +KPHRFLVLEFL+LGTLA+KL+ + G QKR ++ F+++TMLER++EL+LALE+LH+ + +F+VHRDLKPDNVGFK+DGTLKLFDFGLAR+VKRRNR+NARY+MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEML +RR F+GM V+DFY RVVN GARP +D +WP DL+KLI+QCWH DVDRRP+FR ++ RL+ Y K +SK C+SA+N+ D ++ GG S ++ RSAT T +V G E GKK G GL F K G+M +KG A TLTHTAPE G + A +G Sbjct: 189 PGSGRQRENPGYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD-MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRILYSNAKRSSKFCMSAINLNEDPHQKNR--GGASVSVARSATTTNVVSPRGRGGGGPSSRTEIGGKKNGRGL---FRKLGKMFNSRKGG---AKPTLTHTAPEAYSRNGAGGFVEGGAAREG 604
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 448 bits (1152), Expect = 1.420e-150 Identity = 232/380 (61.05%), Postives = 283/380 (74.47%), Query Frame = 2 Query: 410 LTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQG---NQKRNRRQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNRINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQTKSTSKVCLSAVNVISDGSGRHGVGGGFSKTLVRSATATQIV--------GRQDNEEPKGKKKGGLARTFSKFGRMIIGKKGSKEEAAATLTHTAPE 1516 +T GAMCEI+SAE G KVA+K+PR DCEEP VAEHDLEVELDVL + HKHI+ LIGAG + +KPHRFLVLEFL+LGTLA+KL+ + G QKR ++ F+++TMLER++EL+LALE+LH+ + +F+VHRDLKPDNVGFK+DGTLKLFDFGLAR+VKRRNR+NARY+MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEML +RR F+GM V+DFY RVVN GARP +D +WP DL+KLI+QCWH DVDRRP+FR ++ RL+ Y K +SK C+SA+N+ D ++ G S + RSAT T +V G E GKK GG F + G+M +KG A TLTHTAPE Sbjct: 1 MTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD-MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRTLYSNAKHSSKFCMSAINLNEDPHQKNRRGA--SVNVARSATTTNVVSPRGRSGGGPSSRTEIGGKKNGGGV--FRRLGKMFNSRKGG---AKPTLTHTAPE 372
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 417 bits (1072), Expect = 1.460e-135 Identity = 206/320 (64.38%), Postives = 249/320 (77.81%), Query Frame = 2 Query: 302 KKKCGNKCKCPPGSKAC-TRPEPYNRILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQK---RNRRQQSFHVLTMLERAVELSLALEYLHHDV-SKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNRINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQ 1246 K+ C +C C G + + Y +I+WE+L N+ Y+T+GAMC I+SAEYRG KV +K+PR DCE+P++AEHDLEVEL+VL LDH+HII L+GAG++ P+RFLVLE+L++GTLA++L G G G K ++ Q FH +TMLERA+EL+ ALEYLHH V FVVHRDLKPDN+GFK+DGTLKLFDFGLAR VKRR R+NARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEML RR FEGMSV DFY RVVNGG RP +D SWPP L+KLI CWH DVD+RPDF ++ +LK+ Y+ Sbjct: 109 KRHCPPQCICQGGKTLYNSNTQGYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIYR 428
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A835Z8Z5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z5_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.580e-80 Identity = 144/312 (46.15%), Postives = 189/312 (60.58%), Query Frame = 2 Query: 347 ACTRPEPYNRILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYG---------VGGQGNQKRNRRQQSFHVLTMLERAVELSLALEYLHHDV-SKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNRINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQT 1252 +C R + + W EL N++Y+ +GAMC I+SA G+KVA+K+ R DC++P AEHDLE +RFLVLE+L+LGTLA+ +E G G V G KRN+ Q + MLERA+E++ A+EY+H+ + V+HRDLKPDNVGF +DGTLKLFDFGLAR +R ARY MTG TG++RYM PEV YNEKVDVY+FGL+LWEML RR F G+SV +FYA V+ GG RP D SW P+L L+ CW D ++RP F+ + L+ Q+ Sbjct: 22 SCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGA---KRNKHSQ---FVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQS 300
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 266 bits (679), Expect = 1.900e-79 Identity = 143/316 (45.25%), Postives = 198/316 (62.66%), Query Frame = 2 Query: 383 WEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGM------------------------KAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQKRNRRQQ-SFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRN-RINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVS-TRLKETYQQ 1249 +EEL ++QYLT G MC I++AE+RG++V +K+PR DC +P+VA DLE E+D+L L H +I+ ++GAG AE RF++LE+L GTL E + G + R +Q F ++ A++L+ AL YLH + FVVHRDLKP+N+ F DG LKLFDFGLA+IV+RR R++ RY+MTGETGS RYM PEV LPYNEK DVY+FGL+LWEML RR FEG++ +F V+ GG RP + Q W L++L+ +CW D+D RP+F +V T L+ T+++ Sbjct: 42 FEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESK-RFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQITHRE 356
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.510e-70 Identity = 123/296 (41.55%), Postives = 182/296 (61.49%), Query Frame = 2 Query: 383 WEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQKRNRRQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNR-INARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQTKSTSK 1267 W L N++YLT G IH+A G+ V +K + +C++ +A +++E ELDV L H++I+ L+GAG+ + K RF+VLE LD GTL + L T+ + ++R +++ L +L A L+ AL Y H V+HRD+KPDN+GF DGTLKL DFGLA++V N Y ++GETGS+RYMAPEV ++ PYN K DVY+FG++LWEML ++ ++G++ FY R+V+GG RP +++ WP +L L+ CW D+++RP F V RL K K Sbjct: 48 WNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTS-KGVRFVVLERLDGGTLTQVLGYDTRI----RDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMISAEKGGRK 338
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 242 bits (617), Expect = 3.990e-69 Identity = 121/293 (41.30%), Postives = 183/293 (62.46%), Query Frame = 2 Query: 377 ILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQKRNR--RQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNRINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQ 1249 + W EL +++L G+ C I++A Y Q +K+ R D + + +LE+E+++L+ L++++I+ L+GAG++ P RFL++E LD GTL+++ G GG +R R R+Q F+ L +L+ +++ L YLH + V+HRD+KPDN+GF DG KL D GLA+ V R + + MTGETGS RYMAPEV ES PYNEKVDV+++G++LWEM R+ ++GM+ FY+ VV G RP +++ WP + L+A CW D RP F V RL+E Q+ Sbjct: 234 VQWSELSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLNNENIVRLLGAGIE---PERFLIIERLDGGTLSQRC------GSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEMLQE 517
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.990e-66 Identity = 121/294 (41.16%), Postives = 185/294 (62.93%), Query Frame = 2 Query: 377 ILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQKRNRRQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNR-INARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQTK 1255 + W L N++YLT G IH+A V +K + +C++ VA +++E ELD+ L H HI++L GAG+ + K RF+VLE LD G+L + L T+ + ++R +++ F + +L+ A ++ A+EYLH D V+HRDLKPDN+GF DGT+KL DFGLAR+V+ + + Y+M+GETGS+RYMAPEV + PYN K DVY+FG++LWEML +++ F+GM F+ RV GG RP +++ WP + ++ CW D + RP+F+ V +L + + K Sbjct: 374 LRWSNLSNVEYLTDGGNSWIHTAVLNRHPVVVKWLKPECQDLAVAINEIEAELDIHAQLQHSHIVSLCGAGLTS-KGSRFMVLERLDGGSLTQVLGYDTRI----RDRRRRFWKKKHFTYVEVLKCARSIAEAMEYLHSDAIPGCMVLHRDLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERVTYGGERPTINKKWPTEFTDIMKSCWSYDSESRPNFQTVVAKLNKILTKEK 662
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.600e-66 Identity = 127/300 (42.33%), Postives = 189/300 (63.00%), Query Frame = 2 Query: 377 ILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQKRNR--RQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRN-RINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMDQSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRLKETYQQTKSTSK 1267 + W +L N++YLT G IH+A G+ V +K + +C++ +A +++E+ELD+ LDH I L+GAG + K RF+VLE LD GTL++ L G + +R R R++ F + +L+ A ++ AL+Y H +HRDLKPDN+GF DGT+K+ DFGLARIVK + N Y M+G+TGS+RYMAPEV + LPYN+K DVY+FG++LWE+ ++ ++GM+ +FY RVV G RP +++ WP +L +L+ CW D+D RP FR + RL E + K S+ Sbjct: 390 LKWGQLNNVEYLTDGGNNWIHTAVLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLDHPFICGLVGAGTTS-KGVRFIVLERLDGGTLSQML------GYDNRIRDRRRRFWRKKQFAYVEVLKFARCIADALDYCHRLAIPGAMCLHRDLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLRYMAPEVAKCLPYNQKADVYSFGIILWELNAYKKPYDGMNKEEFYERVVEGNERPMINKKWPEELVQLMQDCWSSDMDVRPSFRVIVERLDEMLSKEKGGSE 682
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Match: A0A7S2LY51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY51_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.750e-65 Identity = 124/286 (43.36%), Postives = 185/286 (64.69%), Query Frame = 2 Query: 377 ILWEELYNMQYLTKGAMCEIHSAEYRGQKVAIKVPRLDCEEPKVAEHDLEVELDVLIDLDHKHIITLIGAGMKAEKPHRFLVLEFLDLGTLAEKLEQGTQYGVGGQGNQKRNRRQQSFHVLTMLERAVELSLALEYLHHDVSKTLFVVHRDLKPDNVGFKSDGTLKLFDFGLARIVKRRNRINARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLHNRRAFEGMSVSDFYARVVNGGARPQMD-QSWPPDLKKLIAQCWHPDVDRRPDFRQVSTRL 1231 + WE L N++YLT G IH+A +G+ V +K + +C++ +A +++E EL++ LDH +I+ LIGAG + RF+VLE LD GTL + L T+ + ++R ++ + +L+ A L+ AL Y H V+HRDLKPDNVGF DGT+KL DFGLAR V+ N Y+M+GETGS+RYMAPEV + PYN+K DVY+FG++LWE++ N++ ++GM+ +FY+RVV+GG RP ++ + WP DL +L+ CW D+ +RPDF + L Sbjct: 484 LQWESLRNVEYLTDGGNNWIHTAVLQGKSVVVKTLKPECQDVALAINEIEGELEIHSRLDHPNIVKLIGAGF-TPRGVRFVVLERLDGGTLTQLLGYDTRI----RDRRRRFWAKKKISYMDVLKCARSLAEALAYCHGRAIPNAMVLHRDLKPDNVGFTLDGTVKLIDFGLARTVENATISNDVYEMSGETGSLRYMAPEVADCQPYNQKADVYSFGIILWELVANKKPYDGMNRDEFYSRVVHGGERPVINNKKWPVDLIELMKNCWDTDIAKRPDFADIVDAL 764 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_100.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_100.1.2 >prot_C-australica_Contig_100.1.2 ID=prot_C-australica_Contig_100.1.2|Name=mRNA_C-australica_Contig_100.1.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=556bp MPSDLPGGLPATQRASTEANSSVTKAKRHTADTRSFLANNAPSVNAGSLVback to top mRNA from alignment at C-australica_Contig_100:219..4784+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_100.1.2 ID=mRNA_C-australica_Contig_100.1.2|Name=mRNA_C-australica_Contig_100.1.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4566bp|location=Sequence derived from alignment at C-australica_Contig_100:219..4784+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_100:219..4784+ >mRNA_C-australica_Contig_100.1.2 ID=mRNA_C-australica_Contig_100.1.2|Name=mRNA_C-australica_Contig_100.1.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1668bp|location=Sequence derived from alignment at C-australica_Contig_100:219..4784+ (Chrysoparadoxa australica CS_1217)back to top |