mRNA_C-australica_Contig_10.17.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: D8LHC2_ECTSI (MEKK/MAPK-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHC2_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.320e-83 Identity = 155/311 (49.84%), Postives = 210/311 (67.52%), Query Frame = 1 Query: 139 GWEGEGAMGPSAKPPAAMGQSNKGKKA--------KIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALD--TRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAEVGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWIQQ 1041
GW G +GP P G ++G +RW RG++IG G GTV+ LNLDTGE+MAVK + + D +RD +AFENE MLR++ H NIVK +G+ + + I LEY+ GGS+R +LD FG FEE +S +YT+QL+ GL LH+ G AHRDIK AN LV++ G +KLADFG+SKR+ G++G T SVKGTPFW+APEV+Q ++L +GW KAD+WSLG TV+EMLTG PPW +GP+AA+FKISCT + P++P +S +QD L++C +RDPSLRP A+ L+RH + +
Sbjct: 262 GWRGAFRVGPKV-PEVTRGLGHEGPNPWRRGEDVDPVRWLRGDIIGAGAFGTVHLGLNLDTGELMAVKSISLDRGDMTSRDAKAFENETAMLRDNRHENIVKSYGSSIKGNTMFIFLEYMPGGSVRGLLDRFGGFEEHISVLYTEQLMQGLSFLHKNGVAHRDIKCANCLVNQRGAIKLADFGMSKRIVGLSG-------TXXXXXXQSVKGTPFWMAPEVLQVQDLKDGWIKADVWSLGATVLEMLTGSPPWDNIGPLAAMFKISCTRDLPEIPKSVSPLVQDLLRQCFSRDPSLRPTASELLRHAVVAE 564
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: F0YC78_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC78_AURAN) HSP 1 Score: 280 bits (715), Expect = 1.080e-82 Identity = 135/272 (49.63%), Postives = 188/272 (69.12%), Query Frame = 1 Query: 223 IRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAEVG-PIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
IRW+RGE+IG G G+VY +LNLDTGE+MAVK ++ + + +R+ A ENEV+M++ HPNIV+Y G + + D L+I LEYV GGS+RS+LD FG EE + +Y++Q+LLGL+ LH AHRDIKAAN LVS DG VKLADFG SKR+ + + ++ + KGTP W+APEV++ ++GW+KAD+WS+GCTV+EM TG+PPW++ P+ A++ I+C EE P +PP LS FL C R+P LRP AL+ ++
Sbjct: 1 IRWQRGEMIGKGAFGSVYLSLNLDTGELMAVKHLDCAEVSSRERSALENEVSMMKGLCHPNIVRYLGVDSSNDALAIFLEYVPGGSLRSLLDKFGKLEEDIVRLYSRQILLGLEYLHGNAIAHRDIKAANVLVSNDGSVKLADFGASKRMAAPSNLNGGGAVGALQTGGA--KGTPLWMAPEVIKAAPKSQGWRKADVWSVGCTVIEMSTGRPPWSQYSNPVTAMYHIACVEELPDMPPNLSDDGIQFLWLCFQREPRLRPEVTALLLQGFV 270
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A7S0P7A6_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P7A6_CAFRO) HSP 1 Score: 280 bits (717), Expect = 6.340e-81 Identity = 134/273 (49.08%), Postives = 187/273 (68.50%), Query Frame = 1 Query: 220 KIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAE-VGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
+IRW++GE +G G GTV++ LN+DTGE+MA+KQ++ + L R++ A E EV++LR HPNIV+Y G +R D L + LEYV GGS++ +L+ FG FEE + YT+ LL+GL+ LHR G AHRDIK N LV+ DG +KLADFG SKR+ L A+ VKGTP W+APEV++E+ GW++ADIWS+GCTV+EM TG+PPW+E P+ A++ I+ T++ P P LS+ DFL CL DP RP+ +AL+ HP++
Sbjct: 10 RIRWRKGERLGAGAVGTVFQGLNVDTGELMAIKQIDSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPP-------LAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVTDKPPAFPDSLSAVGHDFLSACLQLDPRRRPDVSALLLHPFV 275
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A7S1CQA9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQA9_9STRA) HSP 1 Score: 294 bits (752), Expect = 3.090e-78 Identity = 149/297 (50.17%), Postives = 201/297 (67.68%), Query Frame = 1 Query: 148 GEGAMGPSAKPPAAMGQSNKGKKAKIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAEVG-PIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
G G M + PAA KIRW+RGEV+G G GTVY LNLD+GE+MAVKQ++ S + +++ A E+EV+M+ DH NIV+Y GTE + LSI LEYV GGS+RS+++ FG +E V +YT+QLLLGL+ LHR G AHRDIK AN LV+ DG +KLADFG SK++ + S+T+ N +KGTP W+APEV++E+ GW+KADIWS+GCTV+EM TGKPPW+ P+ A++ I+C +E P++P LSS DFL C R+PS RP+ L+ HP++
Sbjct: 633 GRGRMASTPSTPAAS--------RKIRWQRGEVLGAGAYGTVYLGLNLDSGELMAVKQLDTSEVSAKELLALEHEVSMMDRFDHENIVRYLGTEHTEETLSIFLEYVPGGSIRSLVNRFGKLDEAVVRVYTRQLLLGLEYLHRHGIAHRDIKGANVLVANDGTIKLADFGASKQL-------GHKSVTA----NTGLKGTPLWMAPEVIKEQQSARGWKKADIWSVGCTVIEMATGKPPWSHFSNPVTAMYHIACADELPEMPATLSSAGHDFLALCFRREPSERPDVTLLLLHPFV 910
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A5A8D7I1_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7I1_CAFRO) HSP 1 Score: 280 bits (717), Expect = 1.650e-77 Identity = 134/273 (49.08%), Postives = 187/273 (68.50%), Query Frame = 1 Query: 220 KIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAE-VGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
+IRW++GE +G G GTV++ LN+DTGE+MA+KQ++ + L R++ A E EV++LR HPNIV+Y G +R D L + LEYV GGS++ +L+ FG FEE + YT+ LL+GL+ LHR G AHRDIK N LV+ DG +KLADFG SKR+ L A+ VKGTP W+APEV++E+ GW++ADIWS+GCTV+EM TG+PPW+E P+ A++ I+ T++ P P LS+ DFL CL DP RP+ +AL+ HP++
Sbjct: 60 RIRWRKGERLGAGAVGTVFQGLNVDTGELMAIKQIDSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPP-------LAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVTDKPPAFPDSLSAVGHDFLSACLQLDPRRRPDVSALLLHPFV 325
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A5A8CNV7_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNV7_CAFRO) HSP 1 Score: 283 bits (724), Expect = 2.370e-76 Identity = 144/310 (46.45%), Postives = 197/310 (63.55%), Query Frame = 1 Query: 154 GAMGPSAKPPAAMGQSNKGKKA---------------KIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAE-VGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
GAM PSA P G S A +IRW++GE +G G GTV++ LN+DTGE+MA+KQ++ + L R++ A E EV++LR HPNIV+Y G +R D L + LEYV GGS++ +L+ FG FEE + YT+ LL+GL+ LHR G AHRDIK N LV+ DG +KLADFG SKR+ L A+ VKGTP W+APEV++E+ GW++ADIWS+GCTV+EM TG+PPW+E P+ A++ I+ T++ P P LS+ DFL CL DP RP+ +AL+ HP++
Sbjct: 332 GAMPPSAAAPRLSGASAAASAADRTRAATASAAPDADRIRWRKGERLGAGAVGTVFQGLNVDTGELMAIKQIDSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPP-------LAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVTDKPPAFPDSLSAVGHDFLSACLQLDPRRRPDVSALLLHPFV 634
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A7S4E9F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9F3_9STRA) HSP 1 Score: 286 bits (731), Expect = 3.290e-76 Identity = 137/273 (50.18%), Postives = 191/273 (69.96%), Query Frame = 1 Query: 220 KIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAEVG-PIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
+IRW+RGE++G G GTVY LNLDTGE+MAVK +E + +R+ A ENEV L+ HPNIV+Y G + D L+I LEYV+GGS+RS+LD FG EE+V +Y +Q+LLGL+ LH G AHRD+KAANAL+S+DG VKLADFG SKR + ++G++ +++ A KGTP W+APEV++ W+KAD+WS+GCT++EM TG+PPW++ P+ A++ I+C EE P++P L + DFL C RDP LRP +AL+ ++
Sbjct: 268 RIRWQRGELVGKGAFGTVYLGLNLDTGELMAVKMLEAEEVSSRERHALENEVRTLKNLGHPNIVRYLGVDSRSDTLAIFLEYVSGGSLRSLLDRFGRLEERVVRLYARQILLGLEYLHANGIAHRDVKAANALLSQDGIVKLADFGASKRTREVSGSTLHATGGHA-------KGTPLWMAPEVIKSTGPQNSWRKADVWSVGCTIIEMATGRPPWSQYSNPVTAMYHIACVEELPEMPSSLGTAGHDFLVLCFDRDPKLRPEVSALLLQRFV 533
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A5A8D8T0_CAFRO (Protein kinase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D8T0_CAFRO) HSP 1 Score: 280 bits (717), Expect = 1.350e-74 Identity = 134/273 (49.08%), Postives = 187/273 (68.50%), Query Frame = 1 Query: 220 KIRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAE-VGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
+IRW++GE +G G GTV++ LN+DTGE+MA+KQ++ + L R++ A E EV++LR HPNIV+Y G +R D L + LEYV GGS++ +L+ FG FEE + YT+ LL+GL+ LHR G AHRDIK N LV+ DG +KLADFG SKR+ L A+ VKGTP W+APEV++E+ GW++ADIWS+GCTV+EM TG+PPW+E P+ A++ I+ T++ P P LS+ DFL CL DP RP+ +AL+ HP++
Sbjct: 60 RIRWRKGERLGAGAVGTVFQGLNVDTGELMAIKQIDSADLSARELAALEQEVSLLRSFRHPNIVRYLGAQREGDTLCVFLEYVPGGSVKRVLERFGGFEEGLVRRYTRHLLVGLEYLHRNGIAHRDIKGGNVLVALDGVIKLADFGASKRISAPP-------LAGASRTGTGVKGTPQWMAPEVVREQEAETGWRRADIWSVGCTVIEMATGRPPWSEFANPVTAMYHIAVTDKPPAFPDSLSAVGHDFLSACLQLDPRRRPDVSALLLHPFV 325
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: V4V3T5_CITCL (Protein kinase domain-containing protein n=3 Tax=Citrus TaxID=2706 RepID=V4V3T5_CITCL) HSP 1 Score: 261 bits (668), Expect = 9.810e-73 Identity = 137/278 (49.28%), Postives = 184/278 (66.19%), Query Frame = 1 Query: 223 IRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRDMEA------FENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAE-VGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
IRW++GE+IG G G VY +NLD+GE++AVKQV ++A +A E EV +L++ HPNIV+Y GT R + L+ILLE+V GGS+ S+L FGPF E V YT+QLLLGL+ LH G HRDIK AN LV GC+KLADFG SK+V +A S S+ KGTP+W+APEV+++ + ADIWS+GCTV+EM TGKPPW++ +AALF I T+ P +P LS + +DFL KCL ++P LRP A+ L++HP++
Sbjct: 66 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANFASKEKAQDHIKELEEEVKLLKDLSHPNIVRYLGTVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSM----------KGTPYWMAPEVIRQTGHS---YSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPENLSVKAKDFLLKCLEKEPDLRPTASELLKHPFV 330
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Match: A0A6N2NJM8_SALVM (Protein kinase domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2NJM8_SALVM) HSP 1 Score: 257 bits (656), Expect = 1.870e-72 Identity = 136/278 (48.92%), Postives = 181/278 (65.11%), Query Frame = 1 Query: 223 IRWKRGEVIGNGVSGTVYKALNLDTGEIMAVKQVEVSALDTRD------MEAFENEVTMLREHDHPNIVKYFGTERAPDGLSILLEYVAGGSMRSMLDTFGPFEEQVSCIYTQQLLLGLQCLHRKGFAHRDIKAANALVSKDGCVKLADFGLSKRVQGMAGASANSSLTSANNPNVSVKGTPFWIAPEVMQEKNLNEGWQKADIWSLGCTVVEMLTGKPPWAE-VGPIAALFKISCTEEEPQLPPKLSSQLQDFLKKCLTRDPSLRPNANALMRHPWI 1035
IRW++GE+IG G G VY +NLD+GE++AVKQV ++A + E EV +L+ HPNIV+Y GT R D L+ILLE+V GGS+ S+L FG F E V +YT+QLLLGL+ LH+ G HRDIK AN LV GC+KLADFG SK+V +A N S+KGTP+W+APEV+ + + ADIWS+GCTV+EM TGKPPW++ +AALF I T+ P +P LS + +DFL KCL P+LRP A+ L++HP++
Sbjct: 43 IRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAASSASKEKTQAHIRELEEEVKLLKNLSHPNIVRYLGTAREDDSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELA----------TINGAKSMKGTPYWMAPEVILQTGHSFS---ADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEHLSVEAKDFLLKCLQEVPNLRPAASELLQHPFV 307 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10.17.1 >prot_C-australica_Contig_10.17.1 ID=prot_C-australica_Contig_10.17.1|Name=mRNA_C-australica_Contig_10.17.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=689bp MGEKGGWEGEGAMGPSAKPPAAMGQSNKGKKAKIRWKRGEVIGNGVSGTVback to top mRNA from alignment at C-australica_Contig_10:46871..52908- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10.17.1 ID=mRNA_C-australica_Contig_10.17.1|Name=mRNA_C-australica_Contig_10.17.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=6038bp|location=Sequence derived from alignment at C-australica_Contig_10:46871..52908- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10:46871..52908- >mRNA_C-australica_Contig_10.17.1 ID=mRNA_C-australica_Contig_10.17.1|Name=mRNA_C-australica_Contig_10.17.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2067bp|location=Sequence derived from alignment at C-australica_Contig_10:46871..52908- (Chrysoparadoxa australica CS_1217)back to top |