mRNA_C-tenellus_contig10462.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: D8LBG5_ECTSI (Spermidine/spermine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG5_ECTSI) HSP 1 Score: 514 bits (1325), Expect = 7.180e-178 Identity = 247/326 (75.77%), Postives = 276/326 (84.66%), Query Frame = 1 Query: 1 TGTVAVARSGLSPDRRWVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPPIALKELAKPPPTLGETTADLEEIMA 978 TG V VA+SGLSPD +TDPWDRGVLFSV V E++HD+RS FQ VQV ET AMGR+LVLDNALQCAERDEAGYHE ITH LCR G A G GKRALIIGGGDGGAAREILRH DVA VDLVDIDAEVM ASK+++PGIWRHP S ++PLD+D RLTVRAEDG+AFL D+SREGYD+IVVDASDPVGPGAALYSDEFYA LR R++PKGAVAVQGGSFWYLP VFRTV+HGL+K+FP V +QCFTA+YPGGLWN+Q+ATLGDDP DVD KA+ LC H L FYSP+ H A+F LPP+AL+ELAKP P L ET ADLE IMA Sbjct: 26 TGGVCVAKSGLSPDFSMITDPWDRGVLFSVKVDEVLHDIRSKFQRVQVLETPAMGRMLVLDNALQCAERDEAGYHEYITHTALCRKGAAAGSGKRALIIGGGDGGAAREILRHDDVANVDLVDIDAEVMAASKKFIPGIWRHPTSSEDKYVPLDSDSRLTVRAEDGLAFLLDDSREGYDIIVVDASDPVGPGAALYSDEFYASLRRRLKPKGAVAVQGGSFWYLPLVFRTVFHGLKKAFPEVRALQCFTAIYPGGLWNIQLATLGDDPQDVDLEKANKLCNSHKLAFYSPQGHHAAFALPPVALQELAKPRPKLSETQADLESIMA 351
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A7S2UVX5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX5_9STRA) HSP 1 Score: 293 bits (751), Expect = 7.640e-96 Identity = 143/226 (63.27%), Postives = 168/226 (74.34%), Query Frame = 1 Query: 283 RALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPPIALKELAKPPPTLGETTAD 960 R L++GGGDGG+ARE LRH DV VD VDIDAEV+RAS+E +P IWRHP S + L+ DPRL +R DG FL D EGYDLIVVDASDPVGPG+ALY+D FYA LR R+RP GAV+VQGGSFWYLP VFRTVYHGL+ SFPVV P QCFT+VYPGG+WNLQ+ATLGDDP++VD K S + L +Y+ H+A+F LPPIA L PP + AD Sbjct: 1 RVLVVGGGDGGSAREALRHPDVGHVDFVDIDAEVLRASRELLPSIWRHPHSTADQPLALEDDPRLNIRVMDGFEFLKDAEGEGYDLIVVDASDPVGPGSALYTDSFYASLRARLRPGGAVSVQGGSFWYLPAVFRTVYHGLKSSFPVVKPYQCFTSVYPGGIWNLQVATLGDDPAEVDPEKVSAITGA-PLEWYTAHTHAAAFHLPPIAYAALEIPPAGMSAAGAD 225
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A3M1TKL5_9DELT (Polyamine aminopropyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1TKL5_9DELT) HSP 1 Score: 285 bits (730), Expect = 3.230e-92 Identity = 151/299 (50.50%), Postives = 192/299 (64.21%), Query Frame = 1 Query: 10 VAVARSGLSPDRRWVTDPWDRG-VLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNL--CKRHDLVFYSPEAHSASFVL 897 + + LSP W TD W G +L+SV V ++ D ++ +Q ++V ET + GR++VLD A+Q AE DEA YHE++ H LCR G + G KR L+IGGGDGGAARE LRH V VDLVDID V RA++++ P +W PD PLD DPR + EDG+ FL +S E YDLIVVD++DPVGPG L+S+ FYAL+ RP GA AVQGGSFWYLP+V GL +F P C++ VYPGGLWNL +AT GDDP++VD +A L C+ FYS E H A F L Sbjct: 5 IEILPDALSPSGDWYTDSWQPGALLWSVHVRRVLRDEQTPYQRLRVLETESHGRMMVLDEAVQVAESDEACYHELLVHPGLCRRGASQGP-KRVLVIGGGDGGAAREALRHPGVTHVDLVDIDPAVTRAARDFFPTLWVRPDGSG----PLDDDPRFHLHHEDGLTFLKGQS-EPYDLIVVDSTDPVGPGEVLFSNAFYALVAEHTRPGGAAAVQGGSFWYLPEVLERATTGLAAAFGRAEPYVCWSDVYPGGLWNLVLATFGDDPAEVDRERAGALTGCR-----FYSAEVHPALFAL 292
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A7S3NLF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLF0_9STRA) HSP 1 Score: 287 bits (735), Expect = 8.210e-92 Identity = 151/328 (46.04%), Postives = 213/328 (64.94%), Query Frame = 1 Query: 10 VAVARSGLSPDRRWVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRA--LIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATL--GDDPSDVDSAKASNLC--KRHDLVFYSPEAHSASF-VLPPIALKELAKPPPTLGETTADLEEI 972 + + R GLSPD+R+V+D W +GV++S + ++ +V+S +Q + + +T ++GR L+LD ALQCAE+DEAGYHEM+THVP+ R H GK + LIIGGGDGG AREIL+++ +D+V+ID V+ ++++P ++ P S+ D R + ED F+ + YDLI++DASDP+GPGA+LY+ FYA ++ +R +GAV Q GSF+YLP VFRTVYHGL FPVV+P CFTAVYPGG WNL IATL D P S + ++ L FY H A+F +PP+A ELAK PP++ E A+ +I Sbjct: 51 ICIKRCGLSPDKRFVSDSWLKGVVWSADIKNVIMEVQSAYQQISIVDTVSLGRALILDGALQCAEKDEAGYHEMMTHVPMLR----HKAGKISDILIIGGGDGGIAREILKYKYFERLDMVEIDQVVVDTCQKFLPRVF--PASIA-------QDDRFHLFYEDAATFVTSAESQSYDLIIIDASDPIGPGASLYTPTFYAEIKRLLRREGAVVAQCGSFFYLPCVFRTVYHGLSAHFPVVMPYSCFTAVYPGGSWNLAIATLRPSDRPEKPHSRRIRGFLADQQEQLSFYDSAVHRAAFDSIPPLARNELAKGPPSIQELQAEFVDI 365
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: H1XQY3_9BACT (S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Caldithrix abyssi DSM 13497 TaxID=880073 RepID=H1XQY3_9BACT) HSP 1 Score: 219 bits (559), Expect = 7.170e-65 Identity = 122/288 (42.36%), Postives = 170/288 (59.03%), Query Frame = 1 Query: 49 WVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSF-PVVVPIQCF-TAVYPGGLWNLQIATLGD-DPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPP 903 W+TD + L GE+++D R+ +QHV+V T A G+ L LDN + C E+DE YHEM++H PL +AHG K L+IGGGDGG RE+LRH V V +V+ID +V+ A++ ++P I + D DPRL +R EDG+ F+AD YDLIVVD++DP+GP L+S+ FY + GA+ VQG + + +VF ++ L+ F P I F YP G+W+ QI G +P++ D KAS C+ H L +YSPE H ASFVLPP Sbjct: 146 WLTDKDENIALSLRHTGEVLYDERTPYQHVKVLNTYAFGKTLTLDNMIMCTEKDEFHYHEMMSH-PLM---MAHGNVKNVLVIGGGDGGVVREVLRHDGVEKVTMVEIDGKVVEAARLHLPQIA----------VAFD-DPRLDLRIEDGIKFVADAPAGTYDLIVVDSTDPIGPAEGLFSETFYRNCHRILNDNGAMIVQGEAPRFNEQVFLDIHQTLKNIFGPKNAHIMLFHVPTYPTGVWSGQIGVKGSFNPAEFDEVKASEFCRAHQLKYYSPEIHKASFVLPP 418
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A7C6T0M1_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6T0M1_9FIRM) HSP 1 Score: 207 bits (527), Expect = 6.530e-62 Identity = 116/285 (40.70%), Postives = 166/285 (58.25%), Query Frame = 1 Query: 49 WVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPP 903 W T+ W G+ SV V IVH ++ FQ + +++T A+GR+LVLD+ +Q E DE YHE I HVPL +AH + LI+GGGDGG+ RE+L+H V LVDID V+ ASK ++P W S DPR V +G+ F+A +++E YD+++VD++DP+GPG AL+ +EFY ++ +RP G ++ Q + ++P + RTV+ + FPV YPGG W ATLG DPS+ + L R +YSPE H +FVLPP Sbjct: 4 WFTEEWVPGLELSVQVKSIVHKAKTKFQELAIYDTEALGRILVLDDVIQTTEIDEHIYHECIVHVPL----LAHPNPEEVLIVGGGDGGSLREVLKHPSVKRATLVDIDEGVIEASKRFLPQ-WNTGWS----------DPRARVVIANGLDFVA-KAKEEYDVVIVDSTDPIGPGEALFREEFYRSIKGALRPGGVMSAQTENPIFMPDLVRTVFGRVANVFPVAKLYTGPMPTYPGGFWCYTCATLGPDPSE-PVREPQGLAFR----YYSPEIHRRAFVLPP 267
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A7C6ZCN3_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6ZCN3_9FIRM) HSP 1 Score: 204 bits (520), Expect = 1.150e-60 Identity = 115/291 (39.52%), Postives = 163/291 (56.01%), Query Frame = 1 Query: 49 WVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPPIALKEL 921 W T+ W G+ S + +V ++ +Q + +F+T GR+LVLDN +Q E+DE YHE + HVP+ H ++ LIIGGGDGG+ RE+LRH+ V +VDID EV+ A+KE++P W S DPR + EDG FLA SR YD+I+VD++DPVGP L+ +FY+L ++P G A Q S P + R VYH + FPV YPGG W+ IA G DP++ ++ ++ L +YSPE H +FVLPP +K+L Sbjct: 4 WFTEEWLPGLRISCQINSVVTRKKTKYQELCIFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPM----FFHPHPEKVLIIGGGDGGSLREVLRHKSVRQAFMVDIDGEVIAAAKEHLPA-WSSGFS----------DPRARLVVEDGREFLA-RSRSEYDVILVDSTDPVGPAEVLFQVDFYSLASKALKPGGCFAAQTESPIATPDLVRNVYHRIAACFPVAKIYTAPVPSYPGGWWSFTIAAFGGDPAE--PSRKPDVDFEGVLKYYSPEIHRRAFVLPPKIVKDL 276
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A7C6LJF4_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6LJF4_9FIRM) HSP 1 Score: 199 bits (505), Expect = 1.340e-58 Identity = 114/291 (39.18%), Postives = 161/291 (55.33%), Query Frame = 1 Query: 49 WVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPPIALKEL 921 W T+ W G+ S + +V+ R+ FQ + +F+T GR+LVLDN +Q E+DE YHE + HVPL ++H ++ LIIGGGDGGA RE L+H V LVDID EV+ A+K Y+P W S D R V EDG+ ++A +R+ +D+++VD+SDPVGP AL+ EFY+ + +RP G + Q S P V R ++H + + FPV YPGG W+ +LG DP V K + +L FYSPE H F+L P K++ Sbjct: 4 WFTEEWLPGLRISAQIKSVVYTKRTKFQELCIFDTVEFGRMLVLDNVIQTTEKDEYIYHESLVHVPL----LSHPNPEKVLIIGGGDGGALRETLKHPQVKEATLVDIDGEVIEAAKTYLPS-WSSSFS----------DKRARVLVEDGLNYVA-TTRDRFDVVLVDSSDPVGPSEALFRPEFYSSIAKVLRPGGMMCAQTESPIATPAVVRDIFHRISRVFPVTRLYTAPVPSYPGGWWSFTCGSLGSDPK-VPVRKPE---ESWELKFYSPEIHERLFILNPKLKKDV 274
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A7C7E3B9_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C7E3B9_9FIRM) HSP 1 Score: 198 bits (503), Expect = 2.760e-58 Identity = 108/291 (37.11%), Postives = 161/291 (55.33%), Query Frame = 1 Query: 49 WVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLVFYSPEAHSASFVLPPIALKEL 921 + + W G+ V + +V+ R+ FQ + +F+T GR+L LDN +Q E DE YHE I HVPL ++H + K+ L+IGGGDGG REI RHQ++ ++ +VDID V+ ASK+Y+PG + G + DPRL + +DG F++ E+ E +D+I++D++DP GPG L++ EFY LR + P G + Q S + + + +YH + FP+ A YPGG W +LG DP + +L FYSPE H F+L P K+L Sbjct: 4 YFVEDWLDGLYLGVQIESVVYTTRTKFQELAIFDTCEFGRMLTLDNVIQVTEVDEYIYHECIAHVPL----LSHPDPKKVLLIGGGDGGTLREITRHQNIESITMVDIDEGVIEASKKYLPGFNQ------GFY-----DPRLNLVIQDGSVFVS-ETEERFDVIIIDSTDPEGPGEVLFTTEFYQSLRRLLTPSGIMCAQTESPLVMTQTVKDIYHRIADVFPITKIFNVPMACYPGGWWCFTCGSLGPDPEKPLREPEESW----NLKFYSPEVHEKVFILGPKLKKDL 274
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Match: A0A2W4MDP5_9FIRM (Polyamine aminopropyltransferase n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4MDP5_9FIRM) HSP 1 Score: 197 bits (501), Expect = 6.560e-58 Identity = 114/296 (38.51%), Postives = 160/296 (54.05%), Query Frame = 1 Query: 49 WVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFETSAMGRLLVLDNALQCAERDEAGYHEMITHVPLCRSGVAHGEGKRALIIGGGDGGAAREILRHQDVATVDLVDIDAEVMRASKEYMPGIWRHPDSVPGNHIPLDADPRLTVRAEDGVAFLADESREGYDLIVVDASDPVGPGAALYSDEFYALLRHRIRPKGAVAVQGGSFWYLPKVFRTVYHGLRKSFPVVVPIQCFTAVYPGGLWNLQIATLGDDPSDVDSAKASNLCKRHDLV--FYSPEAHSASFVLPPIALKELAKP 930 W T+ + + SV V I+H RS +Q + V +T GR+LVLDN +Q +ERDE YHEM+ HVPL AH +R L+IGGGDGG RE+LRH V L +ID V+ ++E +P I D PR V DG+ ++ E + YD+I+VD++DPVGP AL+ + F+ + +R G Q S +Y + R V LR+ FPV YPGGLW +A+ G DP D+ + S R+ L +Y+P+ H A+FVLPP + EL +P Sbjct: 4 WFTENQTQHLRISVRVRNILHHERSEYQELMVLDTHEFGRMLVLDNVIQTSERDEFAYHEMMAHVPL----FAHPNPRRVLVIGGGDGGVLREVLRHPTVEAAHLAEIDGRVVEVARELLPAINNFDD------------PRARVFVTDGIRYVQ-EHPDTYDVIIVDSTDPVGPAVALFQESFHRAVFAALRENGIFVQQSESPFYHRDLIRQVQASLRRVFPVAALYWGVVPTYPGGLWTYSVASKGPDPRRPDAERWS----RYGLATRYYTPDVHRAAFVLPPF-VAELVEP 277 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10462.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10462.2.2 >prot_C-tenellus_contig10462.2.2 ID=prot_C-tenellus_contig10462.2.2|Name=mRNA_C-tenellus_contig10462.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=326bp TGTVAVARSGLSPDRRWVTDPWDRGVLFSVSVGEIVHDVRSVFQHVQVFEback to top mRNA from alignment at C-tenellus_contig10462:1618..3962- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10462.2.2 ID=mRNA_C-tenellus_contig10462.2.2|Name=mRNA_C-tenellus_contig10462.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2345bp|location=Sequence derived from alignment at C-tenellus_contig10462:1618..3962- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10462:1618..3962- >mRNA_C-tenellus_contig10462.2.2 ID=mRNA_C-tenellus_contig10462.2.2|Name=mRNA_C-tenellus_contig10462.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=978bp|location=Sequence derived from alignment at C-tenellus_contig10462:1618..3962- (Choristocarpus tenellus KU2346)back to top |