mRNA_C-tenellus_contig10446.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: A0A6H5KAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW5_9PHAE) HSP 1 Score: 213 bits (542), Expect = 1.540e-63 Identity = 111/230 (48.26%), Postives = 149/230 (64.78%), Query Frame = 1 Query: 1 CYGNDDYSIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDG-----DALCSITANSEGLNVRFSNQGGSIDDFIVDG--SYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 C D IDWDCV GPGSLDEV GG + CS PC+ F V +D+ER+E KVN + F +Y+ E+++I+YSFR E GM+V+ K+TH+GQLKG+ G+G + G D + +TAN +GL VRFSN+ + D +G +L+W+D+ G+W HVKI FG+ M V LSGAV WPS+ PVAW + D VR+KLG+YH D V D +V+YRD+SI GP Sbjct: 23 CDAEKDNHIDWDCVFGPGSLDEVNKKGGYMTKCS-GKRHYPCSLFVVKKDEERSETKVNEGPEGFDYYKGEKYIIKYSFRAEEGMRVSSKYTHLGQLKGTIGKGKVKGTMIKLDPIYCLTANKDGLMVRFSNR--EMPDNFHEGLSKHLNWKDSTGQWVHVKIVTTFGEFMVVRLSGAVEGRAVWPSNLKPVAWH-RDADRVRMKLGLYHKIDQVYDGKVEYRDISIEGP 248
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: D7G946_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G946_ECTSI) HSP 1 Score: 199 bits (505), Expect = 1.260e-58 Identity = 105/201 (52.24%), Postives = 134/201 (66.67%), Query Frame = 1 Query: 16 DYSIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDGDALCSITANSEGLNVRFSNQGGSIDDFIVDG--SYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHS 612 DY IDWDCV GP SL+EV GG C A+ + PC+ F VD+D+ER+EVKV + F F EE++ +YSF+ M+VA +FTH+GQLKGS G M+ GD + S+TAN GL+VRFSN SI+D+ DG LDW+ A GEW HV+I FGQ M+V +SGAVS WPSD PVAW + + VR+KLG+YHS Sbjct: 113 DYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMVKGDPIYSLTANKHGLHVRFSNLE-SIEDY-HDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGKAVWPSDLKPVAWH-RDSEMVRMKLGLYHS 310
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: A0A6H5KQZ0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ0_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.400e-58 Identity = 115/240 (47.92%), Postives = 148/240 (61.67%), Query Frame = 1 Query: 1 CYGNDDYSIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTT---------------FDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDGDALCSITANSEGLNVRFSNQGGSIDDFIVDG--SYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 C DY IDWDCV GP SL+EV GG C A+ + PC++ F VD+D+ER+EVKV + F F EE++ +YSF+ M+VA +FTH+GQLKGS G M+ GD + S+TAN GL+VRFSN SI+D+ DG LDW+ A GEW HV+I FGQ M+V +SGAVS WPSD PVAW + + VR+KLG+YHS +V D V Y+D+SI GP Sbjct: 136 CDALQDYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSSLLPILSDPLSTMNVRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLE-SIEDY-HDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGTAVWPSDLKPVAWH-RDSEMVRMKLGLYHSIHNVADQEVIYQDISIEGP 372
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: D8LDJ9_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ9_ECTSI) HSP 1 Score: 191 bits (485), Expect = 1.580e-55 Identity = 103/230 (44.78%), Postives = 139/230 (60.43%), Query Frame = 1 Query: 1 CYGNDDYSIDWDCVLGPGSLDEVTSHGG-----RIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGM-LDGDALCSITANSEGLNVRFSNQGGSIDDFIV-DGSYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 C D IDWDC+ G S +EV + R S PC+ F V ++ +RAE KV + F F + E ++ +YSFR GMK+ +FTHIGQ+KG+ G +DGD + SI+AN +GL+VRFSN +I D+ D Y +W+DA GEW HV I +FG+ M+V+ +G VS WP DKTPVAW++K R+KLG+YH E+ VGD V+ RDVSI GP Sbjct: 49 CKPKKDNVIDWDCIFGEDSEEEVLKYRSKDKKERATHTSCTDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWKDATGEWVHVTIDTVFGESMEVKFAGGVSGKFVWPKDKTPVAWNNKGK-MARMKLGLYHKEEQVGDGEVEIRDVSIEGP 277
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: D8LDH3_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH3_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.190e-54 Identity = 96/216 (44.44%), Postives = 136/216 (62.96%), Query Frame = 1 Query: 22 SIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDGDALCSITANSEGLNVRFSNQGGSIDDFIVDGSYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 +IDW+C+ G GSL EV + GG + CS + + PC+ F V ++ ERAEV F+F + E ++ +YSFR + GMKV+ T IGQ+KG G L G+ L S+TAN+ G+NVRF+N+ + + D L WEDA GEW HV+I FG+ M+V SGAV WPS PVAW+D + D++ KLG+YH ++ V D V+Y+++SI GP Sbjct: 59 TIDWNCMFGAGSLVEVQARGGTLVSCSSGTDAEPCSRFIVPKEQERAEVLAQKGVGGFQFAKGEAYIFKYSFRAKDGMKVSGSSTRIGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEESDKVEGMDDT--LSWEDATGEWVHVEIRTTFGKSMEVYFSGAVEGKAVWPSSYKPVAWNDDA-DTIMFKLGLYHIKNKVADGEVEYKNISIQGP 271
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: D8LDH2_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH2_ECTSI) HSP 1 Score: 188 bits (478), Expect = 4.320e-53 Identity = 98/218 (44.95%), Postives = 138/218 (63.30%), Query Frame = 1 Query: 22 SIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDGDALCSITANSEGLNVRFSNQGGSIDDFIVDG--SYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 +IDW+CV G GSL EV + GG + CS + PC+ F V ED ERAEV V F+F + E ++ +YSF+ + GMKV+ + +GQ+KG G L G+ L S+TAN++G+NVRF+N I V+G +L WEDA GEW +V+I FG+ M+V SGAV WPS PVAW++ + D++ KLG+YH + V DA V+Y+++SI GP Sbjct: 157 TIDWECVFGYGSLVEVEARGGTLTSCSAGTKVEPCSRFIVPEDKERAEVLVQQGVGGFQFAKGETYIFKYSFKAKDGMKVSGSSSRLGQMKGVSGGFQLLGNPLFSVTANNDGINVRFNNDESDI----VEGMDEFLSWEDATGEWVNVEIQTTFGKSMEVHFSGAVEGKAVWPSSYKPVAWNNDA-DTMMFKLGLYHIRNKVADAEVEYKNISIQGP 369
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: A0A6H5K5S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S3_9PHAE) HSP 1 Score: 178 bits (452), Expect = 1.500e-51 Identity = 99/220 (45.00%), Postives = 134/220 (60.91%), Query Frame = 1 Query: 31 WDCVLGPGSLDEVTSHGG-----RIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGM-LDGDALCSITANSEGLNVRFSNQGGSIDDFIV-DGSYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 +D + G S +EV + R S PC+ F V ++ +RAE KV + F F + E ++ +YSFR GMK+ +FTHIGQ+KG+ G +DGD + SI+AN +GL+VRFSN +I D+ D Y +WEDA GEW HV I +FG+ M+VE +G VS WP DKTPVAW++K R+KLG+YH E+ VGD V+ RDVSI GP Sbjct: 96 FDLLKGEDSEEEVLKYRSKDKKERATHTSCTDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWEDATGEWVHVTIDTVFGEFMEVEFAGGVSGKFVWPKDKTPVAWNNKGK-MARMKLGLYHKEEQVGDGEVEIRDVSIEGP 314
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: A0A6H5JXY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY2_9PHAE) HSP 1 Score: 171 bits (433), Expect = 3.460e-46 Identity = 93/181 (51.38%), Postives = 121/181 (66.85%), Query Frame = 1 Query: 133 FDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDGDALCSITANSEGLNVRFSNQGGSIDDFIVDG--SYLDWEDALGEWTHVKITAIFGQEMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYRDVSIVGP 669 F VD+D+ER+EVKV + F F EE++ +YSF+P MKVA +FTH+GQLKGS G M+ GD + S+TAN GL+VRFSN +I+D+ DG LDW+ GEW HV+I FG+ M V +SGAVS WPSD PVAW + + VR+KLG+YHS +V D V Y+D+SI GP Sbjct: 19 FIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFKPIEDMKVATRFTHLGQLKGSAGGYMIKGDPIYSLTANKHGLHVRFSNLE-TIEDY-HDGLDMPLDWDAVTGEWVHVEIITTFGKSMVVNISGAVSGTAVWPSDLKPVAWH-RDSEMVRMKLGLYHSIHNVHDQEVIYQDISIEGP 196
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Match: A0A6H5JBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB3_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.170e-43 Identity = 89/212 (41.98%), Postives = 129/212 (60.85%), Query Frame = 1 Query: 22 SIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTTFDVDEDDERAEVKVNSNTDQFKFYEDEEWVIRYSFRPESGMKVADKFTHIGQLKGSKGEGMLDGDALCSITANSEGLNVRFSNQGGSIDDFIVDG--SYLDWEDALGEWTHVKITAIFGQ-EMKVELSGAVSDIKEWPSDKTPVAWSDKSMDSVRLKLGVYHSEDDVGDARVDYR 648 +IDW+C+ G GSL EV + GG++ C + + PC+ F V ++ ERAE + F+F + E ++ +YSFR + GMKV+ T +GQ+KG G L G+ L S+TAN+ G+NVRF+N+ DD V+G +L WEDA GEW HV+I FG+ V SGAV+ WP PVAW+D + D++ KLG+YH ++ VG + R Sbjct: 341 TIDWNCMFGVGSLVEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAEAQ--KGVGGFQFAKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNE----DDDNVEGMDEFLSWEDATGEWVHVEIQTTFGEVHGGVYFSGAVNGKAVWPPSYKPVAWNDDA-DTIMFKLGLYHIKNKVGRLEIPVR 545 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10446.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10446.1.1 >prot_C-tenellus_contig10446.1.1 ID=prot_C-tenellus_contig10446.1.1|Name=mRNA_C-tenellus_contig10446.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=223bp CYGNDDYSIDWDCVLGPGSLDEVTSHGGRIYPCSDASSSTPCTTFDVDEDback to top mRNA from alignment at C-tenellus_contig10446:1425..2093+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10446.1.1 ID=mRNA_C-tenellus_contig10446.1.1|Name=mRNA_C-tenellus_contig10446.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=669bp|location=Sequence derived from alignment at C-tenellus_contig10446:1425..2093+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10446:1425..2093+ >mRNA_C-tenellus_contig10446.1.1 ID=mRNA_C-tenellus_contig10446.1.1|Name=mRNA_C-tenellus_contig10446.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=669bp|location=Sequence derived from alignment at C-tenellus_contig10446:1425..2093+ (Choristocarpus tenellus KU2346)back to top |