mRNA_C-tenellus_contig10403.5.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10403.5.1
Unique NamemRNA_C-tenellus_contig10403.5.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.980e-14
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQ 150
            + +DRAFTRMFG++ P  +P+ TY LFT+RDA TVGASFNLP PVSE++Q
Sbjct:  141 IAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQ 190          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A292PR86_9PEZI (Uncharacterized protein n=1 Tax=Tuber aestivum TaxID=59557 RepID=A0A292PR86_9PEZI)

HSP 1 Score: 64.7 bits (156), Expect = 6.440e-11
Identity = 28/55 (50.91%), Postives = 42/55 (76.36%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQERWGI 165
            L +DR F R+FGT +P+PVP+PT++LF+ RDA T+ ASFN+P  ++ YM +  G+
Sbjct:  160 LVKDRNFARIFGTGSPRPVPLPTFILFSTRDAMTIFASFNVPPLLAPYMPQSMGV 214          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A7S0G5N2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5N2_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 2.240e-10
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQER 156
            + +DRAFTRMFG  +PKP+P  TY LF  RD+ T+  SF++P   ++Y+Q+R
Sbjct:   72 IAKDRAFTRMFGVVSPKPLPFATYALFAARDSLTIFTSFSVPPHAAKYVQDR 123          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A151GPQ0_9HYPO (Sequence orphan n=1 Tax=Drechmeria coniospora TaxID=98403 RepID=A0A151GPQ0_9HYPO)

HSP 1 Score: 63.2 bits (152), Expect = 2.750e-10
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTT----PKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQER 156
            + +DRAF RMFGT T    P+PVP+P Y LFT+RD+ T+ ASFNLP  ++ Y+ ER
Sbjct:  196 IYKDRAFVRMFGTPTAAGAPRPVPLPCYALFTLRDSITIFASFNLPPLLAPYIDER 251          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: U4LXY7_PYROM (Similar to Uncharacterized membrane protein C365.16 acc. no. Q9Y7X4 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LXY7_PYROM)

HSP 1 Score: 61.6 bits (148), Expect = 7.960e-10
Identity = 25/51 (49.02%), Postives = 42/51 (82.35%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQE 153
            L +DR+F RMFG+ +P+PVP+P+++LF++RDA T+G SFN+P  ++ Y+ +
Sbjct:  147 LIKDRSFARMFGSGSPRPVPLPSFILFSMRDAMTIGFSFNIPPLLTPYLPQ 197          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: R7YVX7_CONA1 (Uncharacterized protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YVX7_CONA1)

HSP 1 Score: 60.5 bits (145), Expect = 2.380e-9
Identity = 25/52 (48.08%), Postives = 39/52 (75.00%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQER 156
            L +D  FT++FG  +P+PVP+PTY LFT+RD  T+ ASFN+P  ++ +++ R
Sbjct:  173 LYKDSRFTQLFGAASPRPVPLPTYALFTIRDCLTIFASFNIPPLLAPHIESR 224          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A1X2J0N4_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2J0N4_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 3.910e-9
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQER 156
            + +DR+FTRMFGT    P P  +YLLF +RD+ TV ASFN PS VS + QER
Sbjct:  127 IYKDRSFTRMFGTIAAHPFPKLSYLLFALRDSLTVAASFNAPSFVSAWFQER 178          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A6P8B9U2_MAGGR (uncharacterized protein n=6 Tax=Pyricularia TaxID=48558 RepID=A0A6P8B9U2_MAGGR)

HSP 1 Score: 59.3 bits (142), Expect = 6.120e-9
Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 1
Query:    1 LQQDRAFTRMFGT--TTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYM 147
            + +D+ F RMFG    TP+PVP+P+YLLFT+RDA T+ ASFNLP  ++ Y+
Sbjct:  165 IYKDQVFARMFGPPGATPRPVPLPSYLLFTMRDAVTIFASFNLPIILAPYL 215          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A163AVY2_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163AVY2_PHYB8)

HSP 1 Score: 58.9 bits (141), Expect = 7.830e-9
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1
Query:    7 QDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQE 153
            +DRAFTRMFG +  KP+P+ TYLLF  RD+ T+ ASF  PS +S  +Q+
Sbjct:  138 KDRAFTRMFGVSAAKPLPLLTYLLFAARDSMTIAASFTAPSYISATLQQ 186          
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Match: A0A3N4LWF1_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LWF1_9PEZI)

HSP 1 Score: 58.9 bits (141), Expect = 8.180e-9
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query:    1 LQQDRAFTRMFGTTTPKPVPIPTYLLFTVRDAATVGASFNLP 126
            L +DR FTR+F T TP+PVP+PTY LF+ RD  T+  SFNLP
Sbjct:  161 LYKDRTFTRLFSTLTPRPVPLPTYFLFSARDTLTIFFSFNLP 202          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10403.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5G8_9STRA2.980e-1466.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A292PR86_9PEZI6.440e-1150.91Uncharacterized protein n=1 Tax=Tuber aestivum Tax... [more]
A0A7S0G5N2_9RHOD2.240e-1050.00Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A151GPQ0_9HYPO2.750e-1055.36Sequence orphan n=1 Tax=Drechmeria coniospora TaxI... [more]
U4LXY7_PYROM7.960e-1049.02Similar to Uncharacterized membrane protein C365.1... [more]
R7YVX7_CONA12.380e-948.08Uncharacterized protein n=1 Tax=Coniosporium apoll... [more]
A0A1X2J0N4_9FUNG3.910e-957.69Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
A0A6P8B9U2_MAGGR6.120e-954.90uncharacterized protein n=6 Tax=Pyricularia TaxID=... [more]
A0A163AVY2_PHYB87.830e-955.10Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
A0A3N4LWF1_9PEZI8.180e-961.90Uncharacterized protein (Fragment) n=1 Tax=Terfezi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10403contigC-tenellus_contig10403:5322..5486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog61459.XP_007781387.1
Model size165
Max annot lvl4751|Fungi
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.1e-07
EggNOG OGs28PN9@1|root,2QWAD@2759|Eukaryota,39RZR@33154|Opisthokonta,3NY18@4751|Fungi,3QQFG@4890|Ascomycota,20FQK@147545|Eurotiomycetes
Cds size138
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789130.0381536-CDS-C-tenellus_contig10403:5321..54591680789130.0381536-CDS-C-tenellus_contig10403:5321..5459Choristocarpus tenellus KU2346CDSC-tenellus_contig10403 5322..5459 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789130.04863-UTR-C-tenellus_contig10403:5459..54861680789130.04863-UTR-C-tenellus_contig10403:5459..5486Choristocarpus tenellus KU2346UTRC-tenellus_contig10403 5460..5486 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10403.5.1prot_C-tenellus_contig10403.5.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10403 5322..5459 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10403.5.1

>prot_C-tenellus_contig10403.5.1 ID=prot_C-tenellus_contig10403.5.1|Name=mRNA_C-tenellus_contig10403.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=46bp
MFGTTTPKPVPIPTYLLFTVRDAATVGASFNLPSPVSEYMQERWGI
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mRNA from alignment at C-tenellus_contig10403:5322..5486-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10403.5.1 ID=mRNA_C-tenellus_contig10403.5.1|Name=mRNA_C-tenellus_contig10403.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=165bp|location=Sequence derived from alignment at C-tenellus_contig10403:5322..5486- (Choristocarpus tenellus KU2346)
CTACAACAGGATCGTGCTTTTACCCGCATGTTTGGCACAACTACACCAAA ACCGGTCCCTATCCCGACGTACCTCCTCTTTACTGTGAGGGACGCAGCAA CTGTAGGAGCGTCCTTCAACTTGCCCTCTCCAGTGTCGGAATACATGCAG GAGCGATGGGGCATT
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Coding sequence (CDS) from alignment at C-tenellus_contig10403:5322..5486-

>mRNA_C-tenellus_contig10403.5.1 ID=mRNA_C-tenellus_contig10403.5.1|Name=mRNA_C-tenellus_contig10403.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=138bp|location=Sequence derived from alignment at C-tenellus_contig10403:5322..5486- (Choristocarpus tenellus KU2346)
ATGTTTGGCACAACTACACCAAAACCGGTCCCTATCCCGACGTACCTCCT
CTTTACTGTGAGGGACGCAGCAACTGTAGGAGCGTCCTTCAACTTGCCCT
CTCCAGTGTCGGAATACATGCAGGAGCGATGGGGCATT
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