mRNA_C-tenellus_contig10305.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A6H5JH84_9PHAE (Mre11_DNA_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH84_9PHAE) HSP 1 Score: 191 bits (485), Expect = 8.130e-50 Identity = 108/170 (63.53%), Postives = 124/170 (72.94%), Query Frame = 1 Query: 796 VDEAVGEVLARRVVEMVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 1305 VDEAVGE LA +V +MV ELR+E+ PP+GQE + KR+QVLVRL+VEHSDFPTLNNQRFGSQFMGKVANPSDLLL GGL DP+RPD+L ++RVEDLV NLE +DKKLSLLVEP+LK+ALEDYVYK DAQAV D+VKE LE Sbjct: 290 VDEAVGEALANQVEQMVEELRKEDEELALTPPQGQE--IEKRNQVLVRLKVEHSDFPTLNNQRFGSQFMGKVANPSDLLLXXXXXXXXXXXXXXXXXXXXKSSRSGGLSDPIRPDNLADIRVEDLVTENLENADKKLSLLVEPKLKMALEDYVYKQDAQAVPDMVKEALE 457
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S2UFV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFV9_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.250e-32 Identity = 94/195 (48.21%), Postives = 117/195 (60.00%), Query Frame = 1 Query: 793 KVDEAVGEVLARRVVEMVNELRQ---------EEAL-------DPPEPPEGQEYL-------VAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRR--ASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 1302 K+D+ V ++LA+ V ++ + R+ EEA D EP E YL + K DQVLVRLRVEHS F TLNNQRFG++F+G VANPSD+LLF+RRR G DG K KG L P+ PD L+E+ VEDLV NLETS+KKL LL EP L LALED+V K QA+N+ V + L Sbjct: 402 KIDDIVSDLLAKEVTRLIKDAREKTKFLMEDAEEAAKAAALESDDFEPEEAS-YLSKDHKCKIDKPDQVLVRLRVEHSGFSTLNNQRFGAKFVGDVANPSDILLFHRRRQGVETTVGEDGKPRAKKKKGSK--LDQPLAPDDLEELNVEDLVKDNLETSEKKLELLHEPELGLALEDFVSKEQRQAINEAVADLL 593
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7R9ZG15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZG15_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.250e-28 Identity = 67/112 (59.82%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 916 KRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRA--SGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALE 1245 K DQVLVRL+VEHS F TLNNQRFGS+F+ +VANPSD+LLF+RR+ + AGG G K K GGG L +P+ P+ L E+ VEDLV NLET+DKKL +L E RL +AL+ Sbjct: 1 KPDQVLVRLKVEHSGFGTLNNQRFGSRFVSEVANPSDILLFHRRKQVETVKAGG-----GSKSKRGGGILDEPLEPEELAEINVEDLVKENLETADKKLQVLDESRLGVALD 107
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S4DCZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCZ4_HETAK) HSP 1 Score: 121 bits (304), Expect = 1.150e-27 Identity = 73/137 (53.28%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 904 YLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGA---GGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 1305 + V R+Q LVRL+VEH+ FP+LNNQRFGSQF+G+VANP+DLLLF+RRR + GGDG S + G G GL P+ P LD +VEDLV L ++L+LL E L LALE+YVYK D +A+ + V+ TLE Sbjct: 2 FRVEHREQALVRLKVEHTGFPSLNNQRFGSQFVGRVANPADLLLFHRRRPAQEPKTEGGDG--SSVAG-GPPAGLAVPLDPAELDAPKVEDLVRETLAAGARRLALLDERALHLALENYVYKEDIRAIQEAVEVTLE 135
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S4MXX5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXX5_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.290e-27 Identity = 84/193 (43.52%), Postives = 113/193 (58.55%), Query Frame = 1 Query: 796 VDEAVGEVLARRVVEMVNELRQE-------------EAL-----------DPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 1302 VDEA+ +VLA V ++++ R++ EAL D GQ+Y + K DQVLVRL+VEHS F TLNNQRFGS+F+ +ANPSD+LLF+RR+ G +G K G L P+ P+ L EV VEDLV NLE +DKKL +L E RL +AL+++V K QA+ D V++ L Sbjct: 370 VDEAMADVLADHVQSLIDDAREQAEKLXXXXXXAAREALPLGTADLGESGDASILGNGQKYKLMKPDQVLVRLKVEHSGFGTLNNQRFGSRFVTDIANPSDILLFHRRKQVESVKKGGSKAGSKR----GELDKPMEPEELAEVNVEDLVKENLELADKKLQVLDERRLGIALDEFVSKEQRQAIADTVEDEL 558
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: K3W621_GLOUD (Mre11_DNA_bind domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W621_GLOUD) HSP 1 Score: 124 bits (311), Expect = 7.710e-27 Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 796 VDEAVGEVLARRVVEMVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 1305 V + + E+L RV E++ E QE+ L P + L ++ QVLVRLRVEH+ FP L+NQRFGS+F+GKVANP+D+LLFYRR+ D KG L +P+RP LD + +ED++ L D+KL L E L +ALE YV K A A+++ V + LE Sbjct: 330 VTDHIHELLENRVRELLQEAEQEQRLQP-------QSLPSELKQVLVRLRVEHTGFPVLHNQRFGSRFVGKVANPNDILLFYRRKKERAYALDQAGEAKTKKGI---LMEPIRPTRLDTITIEDILQRKLNLPDQKLVFLPEKPLAIALESYVVKNIASALDEFVDQQLE 489
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A7S1Z5E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z5E1_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.890e-26 Identity = 70/134 (52.24%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 904 YLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGL-KGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETL 1302 + + K DQVLVRL+VEH+ F TLNNQRFG++F+ +VANPSDLLLF+RRR D S K K L +P+ P+ L E+ VEDL+ NLE +DKKL +L E RL AL+++V K QA ND V ETL Sbjct: 347 FTIQKPDQVLVRLKVEHTGFSTLNNQRFGARFVSEVANPSDLLLFHRRRQL-----DAHDSATNKSKTNSSLLAEPLDPEELAELNVEDLIQDNLEMADKKLEILDEKRLGFALDEFVTKEQRQAFNDNVAETL 475
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A5D6XXR9_9STRA (Mre11_DNA_bind domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXR9_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.580e-24 Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 796 VDEAVGEVLARRVVEMVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 1305 V + + + L RV ++ + E+ PP PE + QVLVRLRVEH+ FP L+NQRFGS+F+GKVANP+D+LLFYRR+ D +GL+GK L +P+RP LD V +ED++ L D++L L E L LALE YV K A A+++ V LE Sbjct: 337 VADRIHDALEARVHALLRDAEDEQREQPPAHPELK--------QVLVRLRVEHTGFPVLHNQRFGSRFVGKVANPNDILLFYRRKRDRVFALDKDGAGLQGKKDV--LSEPIRPTRLDTVTIEDILQRKLHLPDQQLVFLPEKPLALALEQYVVKNVASALDEFVTAQLE 496
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A4D9CWI9_9STRA (Double-strand break repair protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWI9_9STRA) HSP 1 Score: 115 bits (287), Expect = 8.650e-24 Identity = 74/175 (42.29%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 787 YDKVDEAVGEVLARRVVEMVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKGKGGGG--GLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 1305 + + +E V L + V ++ E R++ PP P GQ + +QVLVRL+VE+S F TLNNQRFG +F+G+VANPSD+LLFYR R G G G+W +EV+VEDLV +E S+KKL L+ EP L ALED+V K A A+ D V+ +E Sbjct: 337 HPRAEEQVQAALEKEVRALIQEAREDHPPPPPLP--GQSLRLQHPEQVLVRLKVEYSGFFTLNNQRFGQRFLGQVANPSDILLFYRARKGERXXXXXXXXXXXXXEGAGRAGVWG-----EREEVKVEDLVRLEVEESEKKLKLMTEPELHEALEDFVSKNTASAIADAVELAVE 504
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Match: A0A2D4BVU1_PYTIN (Double-strand break repair protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVU1_PYTIN) HSP 1 Score: 112 bits (279), Expect = 9.460e-23 Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 808 VGEVLARRVVEMVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGSQFMGKVANPSDLLLFYRRRASGGAGGDGLCSGLKG---KGGGGGLWDPVRPDSLDEVRVEDLVMHNLETSDKKLSLLVEPRLKLALEDYVYKGDAQAVNDLVKETLE 1305 + + L RRV+E+++E +E PPE +VL+RLRVEH+ FP +++QRFG +F+G+VANP+D+LLFYRR+ + + K K G L P+RP LD V VEDLV L SDK+L L E L LALE+YV K A+++ VK LE Sbjct: 343 IHDELERRVLELLDEAEKEFRDRPPE-----------LKEVLIRLRVEHTGFPVVHSQRFGGRFVGRVANPNDILLFYRRKKERQSANSKQVTTTKAALMKAAG--LDGPIRPTRLDTVTVEDLVTSELLQSDKRLVFLPEAPLALALEEYVVKNIPSALDEFVKNVLE 498 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10305.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10305.1.1 >prot_C-tenellus_contig10305.1.1 ID=prot_C-tenellus_contig10305.1.1|Name=mRNA_C-tenellus_contig10305.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=155bp MVNELRQEEALDPPEPPEGQEYLVAKRDQVLVRLRVEHSDFPTLNNQRFGback to top mRNA from alignment at C-tenellus_contig10305:741..5296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10305.1.1 ID=mRNA_C-tenellus_contig10305.1.1|Name=mRNA_C-tenellus_contig10305.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4556bp|location=Sequence derived from alignment at C-tenellus_contig10305:741..5296+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10305:741..5296+ >mRNA_C-tenellus_contig10305.1.1 ID=mRNA_C-tenellus_contig10305.1.1|Name=mRNA_C-tenellus_contig10305.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=465bp|location=Sequence derived from alignment at C-tenellus_contig10305:741..5296+ (Choristocarpus tenellus KU2346)back to top |