mRNA_C-tenellus_contig9987.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.680e-24 Identity = 62/130 (47.69%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 22 VVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDR---GEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSKPDTTVNQEVETILIQLGLSHL 402 +VR L+LTV RG N+L+TGPSGCGKTS LR +AGLW G+ C E + + R G+ +VG GG +F+PQRPY FRGTL EQVTYP++ D V+ IL LGLSHL Sbjct: 806 IVRELSLTVRRGHNVLITGPSGCGKTSLLRTIAGLWEAAAGTVELCPRVEACLRAHEERGTTGRRRPVAGDREVG--------GGVLFVPQRPYCFRGTLFEQVTYPARGDQASPATVKRILSALGLSHL 927
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE) HSP 1 Score: 108 bits (269), Expect = 7.550e-24 Identity = 62/127 (48.82%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 22 VVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSKPDTTVNQEVETILIQLGLSHL 402 +VR L+LTV RG N+L+TGPSGCGKTS LR +AGLW G+ C L A + RG G GG +F+PQRPY FRGTL EQVTYP++ D V+ IL LGLSHL Sbjct: 509 IVRELSLTVRRGCNVLITGPSGCGKTSLLRTIAGLWEAAAGTVELCPRVEAC--LRAHEERGTTGRGRTVAGDREAG---GGVLFVPQRPYCFRGTLFEQVTYPARGDQASPATVKRILSALGLSHL 630
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.370e-23 Identity = 77/190 (40.53%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 22 VVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSK-PDTTV-----NQEVETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVARDWPSVLSPGECQRIGLARVLFHRP 573 ++ +L+L+V G+++L+ G SGCGKTS LR VAGLW P G+ + A+ + S RG+ G C+ MFLPQ+PY F GTL +QV YP + D V V IL QL LSHLL G S GL DWP+VLSPGE QR+ LAR L+HRP Sbjct: 605 LITDLSLSVAEGEHVLICGASGCGKTSLLRVVAGLWEPRGGTVRHCGSSGXXXXXXAQNW-SGGARGDG--GGEYECER---IMFLPQKPYTFVGTLADQVVYPREWRDAAVACAAGRARVADILQQLRLSHLL---RYGGXXXXXXXXXSA--------GLERVADWPNVLSPGEAQRLALARALYHRP 777
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A7S0N9F1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N9F1_9CRYP) HSP 1 Score: 94.7 bits (234), Expect = 1.220e-20 Identity = 72/197 (36.55%), Postives = 90/197 (45.69%), Query Frame = 1 Query: 13 GFVVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLW--RPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSK----PDTTVNQE----VETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVARDWPSVLSPGECQRIGLARVLFHRP 573 G +V LTL+V RG NLL+ GPSG GKTS LR V GLW RP EG+ R +LG GG MFLPQRPY+F GTL +TYP + P+ + E V T+ L L HL+ S +G + R W +LS GE QR+ L R++ HRP Sbjct: 22 GRPIVSGLTLSVERGVNLLIQGPSGSGKTSMLRYVRGLWHLRPDEGTVSTR------LDLGT-----------------------GGIMFLPQRPYVFAGTLQRLITYPREDPHGPELSWEDEGAGLVATLFETLELGHLI----------------------SRADGWNTHRPWHDLLSLGEQQRVSLIRLIHHRP 167
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: UPI0018D1F405 (ATP-binding cassette sub-family D member isoform X1 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D1F405) HSP 1 Score: 96.3 bits (238), Expect = 1.020e-19 Identity = 63/188 (33.51%), Postives = 89/188 (47.34%), Query Frame = 1 Query: 19 VVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSKP---DTTVNQEVETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVARDWPSVLSPGECQRIGLARVLFHRP 573 VV +TL + G +LL+ GP+GCGK+S R V+GLW P+ G + V C D+ PC+ + +LPQRPY+ G+L++QVTYP++ DT IL ++ LS + GL V RDW S LS GE QR+ +AR+ +HRP Sbjct: 521 VVAGGVTLDIEPGSHLLIIGPNGCGKSSLFRIVSGLW-PVHGGTL--QVPRPCACAACA----------DEAPGAPPCRQRPIMFYLPQRPYMSMGSLIDQVTYPARVAPGDTEAEARASAILDRVHLSACA----------------------ARHGGLRVTRDWRSTLSGGEKQRMAMARMFYHRP 673
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A7S0DDY6_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DDY6_MICPS) HSP 1 Score: 95.1 bits (235), Expect = 2.520e-19 Identity = 68/192 (35.42%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 13 GFVVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPC-KMQGGAMFLPQRPYLFRGTLLEQVTYP---SKPDTTVNQEVETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVAR-DWPSVLSPGECQRIGLARVLFHRP 573 G ++V++L L + G+NL V+G +G GKTS R +AGLW P G+ S + C+ + + D G Q + ++PQRPYL G+L +QVTYP S D V+ V L + L L+ + + K + NGL V + DW VLS GE QRIGLARV F +P Sbjct: 448 GRLLVKDLNLVLKPGENLFVSGANGAGKTSLFRVMAGLWAPARGTV---SRPSACFG------KKDTDAGGTQTETPNRSFSFDSRVFYVPQRPYLAHGSLRDQVTYPEVCSARDAAVDARVLDALRTVNLLKLVGDTTIHSGT------------KQDSNGLDVTKHDWADVLSGGEKQRIGLARVFFRKP 618
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A2H4KAY7_SAMRI (ABCD2 n=1 Tax=Samia ricini TaxID=63990 RepID=A0A2H4KAY7_SAMRI) HSP 1 Score: 94.7 bits (234), Expect = 3.510e-19 Identity = 63/186 (33.87%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 19 VVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSK-PDTTVNQEVETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVARDWPSVLSPGECQRIGLARVLFHRP 573 VV +TL + G +LL+ GP+GCGK+S R ++GLW P+ G + C + ET +E G C + ++PQRPY+ RG+L++QVTYPS+ P E + H+L + +R D + GL RDW S LS GE QR+ +AR+ +HRP Sbjct: 516 VVAGGVTLDIAPGTHLLIVGPNGCGKSSLFRIISGLW-PVFGGELAVPSPCACSHCADETNLAE----------GQHCTSRPIMFYIPQRPYMSRGSLIDQVTYPSRAPLGDSGAEARAL-------HIL--RLVRLDACA-----------ARHGGLRAVRDWRSTLSGGEKQRMAMARMFYHRP 670
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A7S1EKN8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EKN8_HEMAN) HSP 1 Score: 94.4 bits (233), Expect = 4.240e-19 Identity = 65/195 (33.33%), Postives = 89/195 (45.64%), Query Frame = 1 Query: 13 GFVVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSK----PDTTVNQE----VETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVARDWPSVLSPGECQRIGLARVLFHRP 573 G ++V NL L + RG N++V GPSGCGKTS LR + GLW R +D H GG M+LPQRPY+F G+L QVTYP P+ + E V +++ +L L HL+ S +G + R W +LS GE QR+ + RV++HRP Sbjct: 343 GRLIVHNLNLAIERGVNVVVQGPSGCGKTSLLRYIRGLWHL---------------------------RADDGTVHTELQVGTGGIMYLPQRPYVFTGSLQRQVTYPRDDPLAPELSWEDEGAGIVASLMEELDLMHLV----------------------SRTDGWNTNRPWHDLLSLGEQQRLSIIRVIYHRP 488
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A6T5WRH5_9RHOD (Probable ATP-dependent transporter ycf16 n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5WRH5_9RHOD) HSP 1 Score: 93.6 bits (231), Expect = 8.770e-19 Identity = 63/189 (33.33%), Postives = 90/189 (47.62%), Query Frame = 1 Query: 19 VVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGA---MFLPQRPYLFRGTLLEQVTYPSKPDTTVNQEVETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSV-ARDWPSVLSPGECQRIGLARVLFHRP 573 +++R L L + G+++LVTGP+G GKTS R +AGLW P EG ++ F G + G ++PQ+PYL GTL +Q+ YP P +Q V+ L ++GL+ LL ++ +GL DW VLS GE QRIGLAR+ FH+P Sbjct: 504 LLLRELDLEIAPGESVLVTGPNGAGKTSLFRVLAGLWAPSEG------------HVARPAFLDPLAEGAGARAATAAAATNNGKSEIFYVPQKPYLVTGTLRDQILYPLAPSLGADQRVKECLDRVGLTKLLTDE----------------------DGLDAWHHDWADVLSGGEKQRIGLARLYFHQP 658
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Match: A0A6J2KPS4_BOMMA (ATP-binding cassette sub-family D member 2 n=3 Tax=Bombyx TaxID=7090 RepID=A0A6J2KPS4_BOMMA) HSP 1 Score: 93.2 bits (230), Expect = 1.200e-18 Identity = 62/188 (32.98%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 19 VVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAMFRSVTAQCYNLGAETFQSEQDRGEDQVGHGSPCKMQGGAMFLPQRPYLFRGTLLEQVTYPSKP---DTTVNQEVETILIQLGLSHLLFEKHMRGDVLGEEEEESVEVGKSNGNGLSVARDWPSVLSPGECQRIGLARVLFHRP 573 VV +TL + G +LL+ GP+GCGK+S R ++GLW P+ G + C + ET S+ C + ++PQRPY+ G+LL+QVTYPS+ D + IL + L H LG GL RDW + LS GE QR+ +AR+ +HRP Sbjct: 515 VVAAGVTLDIAPGTHLLIVGPNGCGKSSLFRIISGLW-PVFGGELSVPRPCACGHCADETNTSD------------ACASRPIMFYIPQRPYMSAGSLLDQVTYPSRAAPDDAAAEERARRILRAVRL-------HAAAARLG---------------GLRAVRDWRATLSGGEKQRLAMARMFYHRP 667 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9987.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9987.1.1 >prot_C-tenellus_contig9987.1.1 ID=prot_C-tenellus_contig9987.1.1|Name=mRNA_C-tenellus_contig9987.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=191bp MADKGFVVVRNLTLTVLRGQNLLVTGPSGCGKTSFLRGVAGLWRPIEGSAback to top mRNA from alignment at C-tenellus_contig9987:12..778- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9987.1.1 ID=mRNA_C-tenellus_contig9987.1.1|Name=mRNA_C-tenellus_contig9987.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=767bp|location=Sequence derived from alignment at C-tenellus_contig9987:12..778- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9987:12..778- >mRNA_C-tenellus_contig9987.1.1 ID=mRNA_C-tenellus_contig9987.1.1|Name=mRNA_C-tenellus_contig9987.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=573bp|location=Sequence derived from alignment at C-tenellus_contig9987:12..778- (Choristocarpus tenellus KU2346)back to top |