prot_C-tenellus_contig9845.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9845.1.1
Unique Nameprot_C-tenellus_contig9845.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length55
Homology
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BLAST of mRNA_C-tenellus_contig9845.1.1 vs. uniprot
Match: D7FSN0_ECTSI (Mitochondrial import inner membrane translocase subunit TIM16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSN0_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 5.260e-9
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:    1 MANPFARVIAQLVVASAGIVSRAFVSAYSQAVHS 34
            MANPFAR+IAQL VASAGIVSRAFVSAYSQAVH+
Sbjct:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHN 34
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9845.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSN0_ECTSI5.260e-991.18Mitochondrial import inner membrane translocase su... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9845contigC-tenellus_contig9845:317..481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9845.1.1mRNA_C-tenellus_contig9845.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9845 113..481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9845.1.1 ID=prot_C-tenellus_contig9845.1.1|Name=mRNA_C-tenellus_contig9845.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=55bp
MANPFARVIAQLVVASAGIVSRAFVSAYSQAVHSECVVHVFVKSICFTLY
PLCF*
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