prot_C-tenellus_contig9844.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9844.1.1
Unique Nameprot_C-tenellus_contig9844.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length48
Homology
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5L1A0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A0_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.820e-12
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 NVF-LDTSELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            NVF L   ELG CTI +ADFPLEP T+P+ RAPYRTNP  + +IDKC
Sbjct:  139 NVFSLSPKELGKCTIAKADFPLEPGTKPVDRAPYRTNPRAQEVIDKC 185          
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5KKE6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE6_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.340e-11
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 NVF-LDTSELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            NVF L   ELG C I +ADFPLEP T+P+ RAPYRTNP  + +IDKC
Sbjct:  139 NVFSLSPKELGKCRIAKADFPLEPGTKPVDRAPYRTNPRAQEVIDKC 185          
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5JAT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT6_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 9.290e-10
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    7 SELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            SELG CTI EA FP+ P TRP+ R PYR NP V  + DKC
Sbjct:    2 SELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKC 41          
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5JGV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV3_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.730e-9
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    4 LDTSELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            L  SELG CTI EA FP+ P TRP+ R PYR NP V  + DKC
Sbjct:  150 LSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKC 192          
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5JXY7_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.730e-9
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    4 LDTSELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            L  SELG CTI EA FP+ P TRP+ R PYR NP V  + DKC
Sbjct:  151 LSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKC 193          
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.730e-9
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    4 LDTSELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            L  SELG CTI EA FP+ P TRP+ R PYR NP V  + DKC
Sbjct:  150 LSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKC 192          
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Match: A0A6H5JK17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK17_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 7.630e-7
Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    8 ELG-ICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKC 46
            ELG  CTI EA FP+ P TRP+ R PYR NP V  + DKC
Sbjct:    3 ELGRCCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKC 42          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9844.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L1A0_9PHAE1.820e-1265.96Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKE6_9PHAE1.340e-1163.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JAT6_9PHAE9.290e-1062.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGV3_9PHAE3.730e-960.47Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JXY7_9PHAE3.730e-960.47RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K112_9PHAE3.730e-960.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK17_9PHAE7.630e-760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9844contigC-tenellus_contig9844:4814..4957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9844.1.1mRNA_C-tenellus_contig9844.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9844 4709..4957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9844.1.1 ID=prot_C-tenellus_contig9844.1.1|Name=mRNA_C-tenellus_contig9844.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=48bp
NVFLDTSELGICTITEADFPLEPDTRPISRAPYRTNPHVRGIIDKCF*
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