prot_C-tenellus_contig9836.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9836.1.1
Unique Nameprot_C-tenellus_contig9836.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length169
Homology
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BLAST of mRNA_C-tenellus_contig9836.1.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.250e-13
Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = 0 
Query:   26 LAVWRALAMVPGEHKLRRHIGLALAVELGVSERYMRRLWEDVGDQLVCGHTLDLGVAVCSGWPLELTPTKMAAIHSISSDNRSFTERQVTMKMATKGLNYSTSTINRWLDDMGAMPNRCWIKPKLKSWQKVWRIGL 161
            +AV  A+ + PG  ++ + +   +    GV ++Y   LW+ V  Q+     LDL     SG P  LTP+K+AA+ +++S NRS T RQV+ ++   GL +   T+ RW   +GA      IKP L   QK  R+  
Sbjct:    1 MAVEIAMGIQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDF 136
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9836.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.250e-1333.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9836contigC-tenellus_contig9836:514..1020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9836.1.1mRNA_C-tenellus_contig9836.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9836 382..2178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9836.1.1 ID=prot_C-tenellus_contig9836.1.1|Name=mRNA_C-tenellus_contig9836.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=169bp
MLAWQPLPTPLCRKDAQVSLNTRVTLAVWRALAMVPGEHKLRRHIGLALA
VELGVSERYMRRLWEDVGDQLVCGHTLDLGVAVCSGWPLELTPTKMAAIH
SISSDNRSFTERQVTMKMATKGLNYSTSTINRWLDDMGAMPNRCWIKPKL
KSWQKVWRIGLCLQSRGP*
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