prot_C-tenellus_contig975.5.3 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig975.5.3
Unique Nameprot_C-tenellus_contig975.5.3
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length158
Homology
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: D7FVW1_ECTSI (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW1_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.020e-46
Identity = 83/107 (77.57%), Postives = 95/107 (88.79%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMN 107
            MA+VP++D  V VAVFCLSLMGTNLADFLREAHRVL PGG++KVAEVRSRFEG EGG V+ FL+VTRRLGFD +Q+DRSNKMFL+ EFKKSGR PE+GVEF AKV +
Sbjct:  162 MANVPIKDASVHVAVFCLSLMGTNLADFLREAHRVLVPGGLVKVAEVRSRFEGEEGG-VERFLEVTRRLGFDTRQMDRSNKMFLLAEFKKSGRKPERGVEFEAKVFS 267          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A6H5KX03_9PHAE (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX03_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 3.360e-43
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAK 104
            MA+VP++D  V VA+FCLSLMGTNLADFLREAHRVL PGG++KVAEVRSRFEG EGG V+ FL+VT+RLGFD  Q+DRSNKMFL+ EFKKSGR PE+GVEF AK
Sbjct:  420 MANVPIKDASVHVAIFCLSLMGTNLADFLREAHRVLVPGGLVKVAEVRSRFEGEEGG-VERFLEVTKRLGFDTMQMDRSNKMFLLAEFKKSGRKPERGVEFEAK 522          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A836C7W6_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.850e-39
Identity = 71/104 (68.27%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAK 104
            MAHVPL D  V +AVFCLSLMGTNLADF+REA RVL+PGG++KVAEVRSRFEG  GG ++ FL V RRLGFD++Q D ++ MF++MEFKK+ R PE  VEF+AK
Sbjct:  112 MAHVPLPDASVHIAVFCLSLMGTNLADFVREARRVLKPGGLVKVAEVRSRFEGAPGG-LNAFLGVMRRLGFDQRQCDNTSTMFVMMEFKKASRAPEADVEFTAK 214          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A6V1UEW2_HETAK (Ribosomal RNA-processing protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UEW2_HETAK)

HSP 1 Score: 115 bits (289), Expect = 2.660e-30
Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMNRAARAPCAFKK 118
            MA+VPL    V VA FCL+LMG NLADF+REAHRVL+  G+MK+AEVRSRFEG E  G++ F+D+  RLGF  +Q D+SN MF+++EF K  +  ++ + ++AK        PC +K+
Sbjct:   25 MANVPLGSNSVDVATFCLALMGENLADFIREAHRVLKMKGIMKIAEVRSRFEG-EDHGLEDFIDIVERLGFQIQQKDQSNTMFVMLEFVKIKKKTDKSISYTAK--------PCIYKR 133          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A1E7FRV0_9STRA (Ribosomal RNA-processing protein 8 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRV0_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.140e-29
Identity = 63/120 (52.50%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEG--GGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMNRAARAPCAFKK 118
            M++VPL D  V V VFCLSLMGTNLADF+REAHRVL+  G +++AEVRSR E +E   G +D F+ V  +LGF+  + DR+N MFL++E KK+G+ P + +EFSAK        PC +K+
Sbjct:  126 MSNVPLEDKSVDVCVFCLSLMGTNLADFIREAHRVLKNDGRVQIAEVRSRIEYIEKTEGTLDEFIGVLGKLGFECVRTDRTNTMFLLLELKKNGKNPSKKLEFSAK--------PCIYKR 237          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: B7G3D9_PHATC (Ribosomal RNA-processing protein 8 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3D9_PHATC)

HSP 1 Score: 113 bits (283), Expect = 3.430e-28
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGG-VDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMNRAARAPCAFKK 118
            M++VPL    V VA+FCLSLMGTNLADF+REAHR L+  G +K+AEVRSRFE   G   +  F+DV  +LGF+  + DRSNKMF++++  K+G+ P + +EF+AK        PC +K+
Sbjct:  128 MSNVPLNAKVVDVAIFCLSLMGTNLADFVREAHRTLKDTGRLKIAEVRSRFESRSGKDELKDFIDVLDKLGFECIKTDRSNKMFVLLDLTKNGKPPRKEIEFTAK--------PCIYKR 238          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A7S2ED75_9STRA (Ribosomal RNA-processing protein 8 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ED75_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.200e-27
Identity = 64/130 (49.23%), Postives = 85/130 (65.38%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPG--GVMKVAEVRSRFEGME----------GGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMNRAARAPCAFKK 118
            M++VPL    V VAVFCL+LMGTN+ DF+REAHRVL+ G  G++K+AEVRSRFE              GG+D FL V + LGFD  +++RSNKMFL+M+F K+G  P +   F+AK        PC +K+
Sbjct:  305 MSNVPLETNTVDVAVFCLALMGTNIDDFIREAHRVLKKGNGGILKIAEVRSRFESTTTDSSADNSSGSGGLDEFLQVMKTLGFDCTRMNRSNKMFLMMDFVKNGDEPSKQARFTAK--------PCIYKR 426          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A7S1TX81_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX81_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.620e-27
Identity = 60/119 (50.42%), Postives = 82/119 (68.91%), Query Frame = 0
Query:    2 AHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGG--VDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMNRAARAPCAFKK 118
            A+VPL D  V VAVFCL+LMGTN+ADF+REA+RVL+P G +KVAEVRSRFEG +GG   ++ F  + R+ GF+ K+L+RSN+MF +++  K     +    FSAK        PC +K+
Sbjct:  108 ANVPLEDKTVDVAVFCLALMGTNVADFIREANRVLKPRGKLKVAEVRSRFEGGDGGEDLLESFQSLLRQCGFEVKKLNRSNRMFFLLDAIKVSDDVDTSAAFSAK--------PCIYKR 218          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A6S8UDW5_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8UDW5_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.220e-27
Identity = 64/143 (44.76%), Postives = 87/143 (60.84%), Query Frame = 0
Query:    1 MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFE----------GMEGGG---------------VDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAKVMNRAARAPCAFKK 118
            MA+VP+ D  V + VF L+LMGTN+ADF+REAHRVL P G +K+AEVRSRFE          G   GG               ++ FLDV  +LGF+  ++D+SNKMFL+MEF+K G+ P++   F+AK        PC +K+
Sbjct:  260 MANVPIPDSSVDIGVFVLALMGTNIADFIREAHRVLTPDGKLKIAEVRSRFESGVIGEEESNGKSKGGKGEFTYSKKKSDDSLLNHFLDVMNQLGFNSTKMDKSNKMFLLMEFEKIGKKPDKDATFTAK--------PCIYKR 394          
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Match: A0A024G7I7_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G7I7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 8.640e-27
Identity = 49/103 (47.57%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    2 AHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSRFEGMEGGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVEFSAK 104
            AHVPL    + +A++CL+LMGT + ++LREAHRV++ GG++K+AEV+SRFE  + GG+  F+   R+LGFD ++ D  NKMF+++EF+KS R  +  V    K
Sbjct:  168 AHVPLNSKSIDIAIYCLALMGTTIPEYLREAHRVMKAGGILKIAEVKSRFETKQLGGIQGFISQLRKLGFDYQEKDERNKMFVLLEFQKSNRKKDTNVRIELK 270          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig975.5.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW1_ECTSI1.020e-4677.57Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A6H5KX03_9PHAE3.360e-4376.92Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A836C7W6_9STRA4.850e-3968.27Ribosomal RNA-processing protein 8 n=1 Tax=Tribone... [more]
A0A6V1UEW2_HETAK2.660e-3050.85Ribosomal RNA-processing protein 8 n=1 Tax=Heteros... [more]
A0A1E7FRV0_9STRA2.140e-2952.50Ribosomal RNA-processing protein 8 (Fragment) n=1 ... [more]
B7G3D9_PHATC3.430e-2850.42Ribosomal RNA-processing protein 8 n=2 Tax=Phaeoda... [more]
A0A7S2ED75_9STRA1.200e-2749.23Ribosomal RNA-processing protein 8 n=3 Tax=Ditylum... [more]
A0A7S1TX81_9STRA6.620e-2750.42Ribosomal RNA-processing protein 8 n=1 Tax=Phaeomo... [more]
A0A6S8UDW5_9STRA8.220e-2744.76Ribosomal RNA-processing protein 8 n=1 Tax=Chaetoc... [more]
A0A024G7I7_9STRA8.640e-2747.57Ribosomal RNA-processing protein 8 n=2 Tax=Albugo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007823Ribosomal RNA processing protein 8PFAMPF05148Methyltransf_8coord: 1..95
e-value: 4.5E-30
score: 105.1
IPR007823Ribosomal RNA processing protein 8PANTHERPTHR12787UNCHARACTERIZEDcoord: 1..118
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 1..119
e-value: 9.3E-28
score: 99.2
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 3..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig975contigC-tenellus_contig975:10660..11984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig975.5.3mRNA_C-tenellus_contig975.5.3Choristocarpus tenellus KU2346mRNAC-tenellus_contig975 9674..14269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig975.5.3 ID=prot_C-tenellus_contig975.5.3|Name=mRNA_C-tenellus_contig975.5.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=158bp
MAHVPLRDGCVKVAVFCLSLMGTNLADFLREAHRVLQPGGVMKVAEVRSR
FEGMEGGGVDLFLDVTRRLGFDKKQLDRSNKMFLVMEFKKSGRTPEQGVE
FSAKVMNRAARAPCAFKKSIHMKAFVCARRIQTLRGMVCYMSCPVRSVLF
LPSCTLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007823RRP8
IPR029063SAM-dependent_MTases