prot_C-tenellus_contig9614.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9614.1.1
Unique Nameprot_C-tenellus_contig9614.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length378
Homology
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.650e-75
Identity = 126/236 (53.39%), Postives = 166/236 (70.34%), Query Frame = 0
Query:  140 STSEVDCVERGTPFTGWTSFGGSPPPAQRGEFLGHLAVLVVWLPGLWGQYSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRP--LGPMVKDDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHRARST 373
            ST   D  E  +P T   S G S   A+ G +        VWL  +WG Y+  L+ SPL+ KA+T+GV+ L GD+ AQ+FE  +       GP +K+ +RL AVA+DS+  TGP LHALYG+LE L+PTA  G VPAA+HV++DTF+FDP+FVASFFCVTG +E RS  + ILP ++ RE+W AV+G+W +SLLFCP+QF +FRYLPL+FRV+ VN CDI WTSV+S+FSH+A  T
Sbjct:  149 STQHRDRGEGASP-TVEMSGGASKKSARFGPW--------VWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTRRLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRSLRKSILPALR-REFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKAVPT 374          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 2.610e-75
Identity = 154/385 (40.00%), Postives = 211/385 (54.81%), Query Frame = 0
Query:    5 HGCAAVMALISPALSWGLMPRFPDVFTQTRQQPRECQQCLGPIPDGACTLRTLCGGSRRQPPKANKLKSSE--IGTPWWNTGTVVDALRATAQSTTPRVVAGIGT--------------LNCPSSTGEGKAWFGNVCHGGAKGGNVTISDSSTSEVDCVERGTPFTGWTSFGGSPPP-AQRGEFLGHLAVLVVWLPGLWGQYSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRP--LGPMVKDDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHRA 370
            H   ++M ++ PA    LMP  P  F      PR  Q      P   C  +  CG +R     AN  + +   +G   W  G      R+   ++TP    G+G                     T       G +  G    G   ++  ST   D  ER +     +  GG P   A  G +        VWL  +WG Y+  L+ SPL+ KA+T+GV+ L GD+ AQ+FE  +       GP +K+++RL AVA+DS+  TGP LHALYG+LE L+PT G G VPAA+HV++DTF+FDP+FVASFFCVTG +E R   + ILP ++ RE+W AV+G+W +SLLFCP+QF +FRYLPL+FRV+ VN CDI WTSV+S+FSH+A
Sbjct:   10 HNLLSIMVVLLPATWSLLMP--PTCFPSRFWVPRHAQVA----PKMRC--QGECGTTRAATAAANASRQASWGVGVSSWVAG-ATSFSRSAIHASTPE---GVGAWWNGSXXXXXXXXXXXXXXGTDGXXXXXGAMGEGDDAKGASDMNACSTQHRDRGERASSTVDMS--GGEPKKSASFGPW--------VWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNRRLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRPLRKSILPALR-REFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKA 371          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: W7TTT3_9STRA (Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTT3_9STRA)

HSP 1 Score: 191 bits (484), Expect = 6.850e-54
Identity = 98/191 (51.31%), Postives = 131/191 (68.59%), Query Frame = 0
Query:  185 LWGQYSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRPLG------PMVKDDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHR 369
            LWGQY+ LL+S P+LTKA+TAG+IAL GDL+AQ FE   + R L       P   +  R LAV ++ +  TGPGLH LY  LE  +P A  G + A  HV VD F+FDP+FV  FF + G +EG+   RDI P ++ REYWSA++G W +S++F P++F +FR LPL+ RV+VVNL D+ WT+V+SFF HR
Sbjct:  155 LWGQYAELLESKPVLTKAITAGLIALFGDLLAQVFEYKLTCRRLAKGEEPAPFHLNFLRCLAVTIEGVVITGPGLHYLYTALESWMP-AQRGFLAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKHLSRDIFPQVQ-REYWSALKGGWGVSIMFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHR 343          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK)

HSP 1 Score: 180 bits (456), Expect = 1.810e-51
Identity = 89/185 (48.11%), Postives = 126/185 (68.11%), Query Frame = 0
Query:  189 YSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRPLGPMVK----DDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHR 369
            YS +LK++P+LTKAL+A  IA  GD   Q +E+ R     G +V     D +R LAV +D +F TGP LH  Y +LE LVPT G GA+PA +HV  DTF+ DP+FV +FF  TG  E R    D LP ++ RE+ +A+RG+W++S +  P+QF SFRY+P+++RV++VN  D+ WT+ +SFFSH+
Sbjct:   24 YSSMLKNAPMLTKALSAAGIAASGDFATQIWEHWRETSNQGILVDKFILDRRRQLAVMMDGIFITGPILHLAYELLEHLVPTEGGGALPAVLHVAADTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLR-REFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSHK 207          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A836CK90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK90_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.060e-47
Identity = 74/127 (58.27%), Postives = 96/127 (75.59%), Query Frame = 0
Query:  243 VDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHR 369
            +D +  TGPGLH LYG+LE  +PT   GA+PAA HVL+DTF+FDP+FV SFF  T   EGRS  RD+ P + +REYW A+RG+W +S+LF P+Q+ +FRYLPLQ RV  +NLCD+ WT+ LS+ SHR
Sbjct:    2 IDGVCITGPGLHFLYGLLESHIPTTAGGALPAAAHVLLDTFLFDPVFVCSFFFTTALFEGRSLRRDVAPRL-AREYWPALRGSWGVSVLFWPVQWAAFRYLPLQLRVASINLCDVAWTAALSYASHR 127          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A836CPL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL7_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.290e-45
Identity = 70/121 (57.85%), Postives = 95/121 (78.51%), Query Frame = 0
Query:  249 TGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHR 369
            TGPGLH LYG+LE  +PT   G +PAA+HVL+DTF+FDP+FV +FF  T   EG+S  R+++P ++ REYW AV G+W +S+LF P+Q+  FRYLPLQ RV+ +N+CD+ WT+VLSFFSH+
Sbjct:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLE-REYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK 120          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A6U1B1H0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B1H0_9STRA)

HSP 1 Score: 151 bits (382), Expect = 6.080e-40
Identity = 79/193 (40.93%), Postives = 113/193 (58.55%), Query Frame = 0
Query:  185 LWGQYSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRPLGPMVKDDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHRARSTTTFN 377
            L G Y  LL S+P+ TKA++ G I  LGD++AQ  E  R+  P      D  R  A  VD +  TGP LH  Y +LER++P+ G       + + VD  +FDPI +A+FFC T  +E +    D++  +++ +YWS   G + +S    PIQF SFRY+P++ RV+VVNLCD+ WTSV+S  SH      T +
Sbjct:   67 LLGWYLALLSSAPIRTKAVSTGCIECLGDMIAQTAEARRTGLPF-----DRVRSFACFVDGLLVTGPSLHYGYALLERVIPSVGGPVWATLIQITVDELIFDPIDIATFFCTTSLIERK----DLVQRLRN-DYWSTFWGGFGVSFACTPIQFISFRYMPVKTRVLVVNLCDLAWTSVVSVLSHAQDRRDTIH 249          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A1Z5JHC7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHC7_FISSO)

HSP 1 Score: 132 bits (332), Expect = 2.710e-32
Identity = 78/218 (35.78%), Postives = 123/218 (56.42%), Query Frame = 0
Query:  167 QRGEFLGHLAVLV----VWLPGLWGQYSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRPLGPMVKDDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSHRAR-----STTT 375
            +R ++L   A+L     V L  L   Y+  L + PLLTK++T+ V+  +GD VAQ +E+H         +   +R LA  V+ + ++GP +H  Y + E ++P  G+    A +HVL+D+ + D +FV S F +TG +EG SF +  L     R+    ++ +W  SL   P++   FRYLP+ +RV+ VN+ DI W +V+SF SH+ R     STTT
Sbjct:   64 ERSQWLSFFALLGSLSRVPLGALLQTYTLWLTTQPLLTKSITSAVMGCVGDAVAQRWEHHP--------IYSKRRGLAAMVEGLLWSGPLMHRAYSLFEHILPV-GNNMGFALIHVLLDSLLLDSVFVTSAFWITGLLEGFSFKQ--LRQQYQRDIGGTLKASWLTSLFLLPVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSHKTRGKELTSTTT 270          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A7S2M641_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M641_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.550e-26
Identity = 71/200 (35.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query:  189 YSGLLKSSPLLTKALTAGVIALLGDLVAQWFENHRSNRPL----GPMVKDD-----------KRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGA-----VPAAVHVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSH 368
            Y   L ++PLLTK +T G+IA +GD  AQ+FE      P     G   K             +R +A  ++ +  + P +H  Y + E +VPT G G+     + A  HVL D  + D IFV +    TG +EG  F + ++PN++ R Y   ++ +     L  P+QF SFR+LPL  RV+ VN  D+ WT V+SF SH
Sbjct:   78 YLSALDATPLLTKCVTGGLIAFVGDYGAQFFEWKSKQAPKESYNGSTTKQRSTISIHGTYNIRRGIARFLECLLISSPLMHYGYDLFETVVPTVGGGSALYRSIAALTHVLADCVLLDAIFVMTGIVFTGLLEGHRFRQQVIPNLR-RVYLPTLKASVMTCGLLAPLQFLSFRFLPLSLRVLSVNAVDLIWTGVISFVSH 276          
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Match: A0A7S1BNK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNK7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.510e-26
Identity = 62/191 (32.46%), Postives = 101/191 (52.88%), Query Frame = 0
Query:  185 LWGQYSGLLKSSPLLTKALTAGVIALLGDLVAQWFENH---RSNRPLGPMVKDDKRLLAVAVDSMFFTGPGLHALYGVLERLVPTAGHGAVPAAV----HVLVDTFMFDPIFVASFFCVTGFVEGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVMVVNLCDIGWTSVLSFFSH 368
            L   Y  LL   P++TKAL+AG++A+LGD +AQ  E        +         +R L V ++++   GP +H ++G  + ++P  G   +   +    HVL DTF  D  F+A  F  +   EG   LR ++P M+ ++Y+  ++ TW +S    P++   FRYLPL  R + +N  DI WTS  +F ++
Sbjct:   33 LLSWYLSLLVERPVVTKALSAGLVAILGDFLAQNVEGSIPGTEEQRTSSFATRHRRTLVVFLEAVLVVGPTMHIMFGAFDSVLPIVGTTGLTRTLSVMAHVLADTFFLDAFFIAIMFFSSSVAEGED-LRTVVPRMR-QDYFDTLKATWILSGAMAPLEMCIFRYLPLSLRTVALNFTDIIWTSFTNFITY 221          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9614.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK43_9PHAE1.650e-7553.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRI6_ECTSI2.610e-7540.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TTT3_9STRA6.850e-5451.31Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A7S3XMM5_HETAK1.810e-5148.11Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CK90_9STRA3.060e-4758.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPL7_9STRA1.290e-4557.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1B1H0_9STRA6.080e-4040.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5JHC7_FISSO2.710e-3235.78Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S2M641_9STRA1.550e-2635.50Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1BNK7_9STRA4.510e-2632.46Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 298..364
e-value: 1.9E-13
score: 50.3
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 186..369
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 186..369
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..306
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 318..339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 340..344
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 367..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9614contigC-tenellus_contig9614:1135..3121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9614.1.1mRNA_C-tenellus_contig9614.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9614 891..3121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9614.1.1 ID=prot_C-tenellus_contig9614.1.1|Name=mRNA_C-tenellus_contig9614.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=378bp
MFGPHGCAAVMALISPALSWGLMPRFPDVFTQTRQQPRECQQCLGPIPDG
ACTLRTLCGGSRRQPPKANKLKSSEIGTPWWNTGTVVDALRATAQSTTPR
VVAGIGTLNCPSSTGEGKAWFGNVCHGGAKGGNVTISDSSTSEVDCVERG
TPFTGWTSFGGSPPPAQRGEFLGHLAVLVVWLPGLWGQYSGLLKSSPLLT
KALTAGVIALLGDLVAQWFENHRSNRPLGPMVKDDKRLLAVAVDSMFFTG
PGLHALYGVLERLVPTAGHGAVPAAVHVLVDTFMFDPIFVASFFCVTGFV
EGRSFLRDILPNMKSREYWSAVRGTWAISLLFCPIQFFSFRYLPLQFRVM
VVNLCDIGWTSVLSFFSHRARSTTTFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22