mRNA_C-tenellus_contig922.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig922.1.1
Unique NamemRNA_C-tenellus_contig922.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: D7FXG1_ECTSI (ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG1_ECTSI)

HSP 1 Score: 869 bits (2245), Expect = 8.080e-311
Identity = 460/509 (90.37%), Postives = 475/509 (93.32%), Query Frame = 1
Query:    1 MALRYGALVAKRALSGPHAPVAAGFHATAAA-AASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETSTAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLAEEAN 1524
            MALR  A VAKRAL+ P A   + FHA+A A A S GRVTQVIGAVVDVQFDK+LPPI NALEV VA    RLVLEVAQHLGENTVRTIAMEATEGLTRGQ C DTGAPIM+PVG+ETLGRIMNVIGEPVDERGPI SK KAPIHN APTFE+QGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGG+SVFAGVGERTREGNDLYHEMIEGGVIKI+E ST GSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIG+EHY+TARATQKLLQDYKGLQ+IIAILGMDELSEDDK+TVARARKVQRFMSQPFTVAEVFTGT GVFV L+DTIKGFQEILSG HDDLPEGAFYMVGDI SV  KAK+LAE AN
Sbjct:    1 MALRL-ATVAKRALAAPVAAGRSSFHASALAQAGSVGRVTQVIGAVVDVQFDKDLPPIFNALEVNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCTDTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKITEDSTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQEIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMVGDIASVGVKAKQLAESAN 508          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A836CJ45_9STRA (ATP synthase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ45_9STRA)

HSP 1 Score: 853 bits (2205), Expect = 8.900e-305
Identity = 445/507 (87.77%), Postives = 469/507 (92.50%), Query Frame = 1
Query:    1 MALRYGALVAKRALSGPHAPVAAGFHATAAAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETSTAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLAEEA 1521
            MALR+ A  AKRA+ G       G  A A+ +++ GR+TQVIGAVVDVQFDK+LPPI+NALEV VAK EPRLVLEVAQHLGENTVRTIAMEATEGLTRGQ C+DTG+PIM+PVG ETLGRIMNVIGEPVDERGPI SK KAPIHNVAP+F +QGK+QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKI+E  T GSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPR+IG+EHY+ ARATQKLLQDYK LQDIIAILGMDELSEDDK+TVARARKVQRFMSQPFTVAEVFTGT GVFV+L+DTI GF+EILSG HDDLPE AFYMVGDI SV  KAKKLAE +
Sbjct:    1 MALRFAASAAKRAV-GHSLSGRVGVQACASMSSNAGRITQVIGAVVDVQFDKKLPPIMNALEVDVAKGEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQKCLDTGSPIMVPVGAETLGRIMNVIGEPVDERGPIESKAKAPIHNVAPSFAEQGKTQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKINEKDTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGDEHYKVARATQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVKLEDTISGFKEILSGAHDDLPEAAFYMVGDITSVVAKAKKLAESS 506          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A7S2SJ94_9STRA (ATP synthase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ94_9STRA)

HSP 1 Score: 809 bits (2090), Expect = 2.960e-287
Identity = 420/498 (84.34%), Postives = 447/498 (89.76%), Query Frame = 1
Query:   22 LVAKRALSGPHAPVAAGFHATAAAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETSTAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLAE 1515
            ++A + L+   A  A GFHA A A   TG+VTQVIGAVVDVQFD ELPPILNALEV VA+ E RLVLEVAQHLGENTVRTIAM+ATEGL RGQ C DTGAPIMIPVG ETLGRI+NV+G+ VDE+GP++SK +APIH  AP F +QGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIE GVIK++  S AGSKA LVYGQMNEPPGARARVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IA LGIYPAVDPLDSTSRMLDPRV+G+ HY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDK+TVARARKVQRFMSQPFTVAEVFTGT G FV L+DTIKGF EIL+G HDD+PE AFYM GDI  V E AK +A+
Sbjct:   13 MLALKTLAKRVAAPARGFHAAAPALGGTGKVTQVIGAVVDVQFDGELPPILNALEVKVAEGESRLVLEVAQHLGENTVRTIAMDATEGLVRGQDCADTGAPIMIPVGPETLGRIVNVVGDAVDEKGPVISKARAPIHKSAPLFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIESGVIKVNGDSLAGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRNIASLGIYPAVDPLDSTSRMLDPRVLGDTHYEMARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGKFVSLEDTIKGFGEILAGEHDDIPEAAFYMKGDIAEVLESAKAMAQ 510          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A7R9UFC7_9STRA (ATP synthase subunit beta n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFC7_9STRA)

HSP 1 Score: 789 bits (2038), Expect = 1.010e-278
Identity = 409/487 (83.98%), Postives = 435/487 (89.32%), Query Frame = 1
Query:   58 PVAAGFHATAAAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISET--STAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLA 1512
            P    FHA+ A  A+ G+VTQVIGAVVDVQFD ELPPILNALEV VA+ EPRLVLEVAQHLGENTVRTIAM++TEGL RGQ C DTG PIM+PVG   LGRI+N+IGEPVDERGP+ +   APIH  APTF +QGKS EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGGYSVFAGVGERTREGNDLY+EM+EGGVIKI +   ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPR++GEEHY+ ARA QKLLQDYK LQDIIAILGMDELSEDDK+TVARARKV+RF+SQPF VAEVFTGTPG FV L D+IK F+EILSG HD+LPEGAFYMVG I  V +KAK +A
Sbjct:   61 PAVRSFHASPAMCAAVGKVTQVIGAVVDVQFDSELPPILNALEVKVAEGEPRLVLEVAQHLGENTVRTIAMDSTEGLVRGQPCEDTGNPIMVPVGPAALGRIINIIGEPVDERGPVPTDKFAPIHAPAPTFTEQGKSAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMMEGGVIKIDDANNSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDQEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRIVGEEHYELARAIQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVERFLSQPFHVAEVFTGTPGKFVALDDSIKAFKEILSGAHDELPEGAFYMVGGIDDVIQKAKDMA 547          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A7S2GC43_9STRA (ATP synthase subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC43_9STRA)

HSP 1 Score: 781 bits (2016), Expect = 4.620e-276
Identity = 405/482 (84.02%), Postives = 435/482 (90.25%), Query Frame = 1
Query:   73 FHATAAAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETST---AGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKL 1509
            FHA   +AAS G+VTQVIGAVVDVQFD  LP ILNA+EV VA+ +PRLVLEVAQHLGENTVR IAM+ATEGL RGQ   DTG PIM+PVG E+LGRI+NV+G+P+DERGP+ +KVK P+H  AP F +QGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIE GVIK+ E +    AGSKA LV+GQMNEPPGARARVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IA+LGIYPAVDPLDSTSRMLDP+VIG EHY  ARATQKLLQDYKGLQDIIAILGMDELSEDDK+TVARARKVQ+FMSQPFTVAEVFTGT G FV L D+IKGF EI+SG HDD+PEGAFYM G+I+SV E AK +
Sbjct:   28 FHAAPLSAAS-GKVTQVIGAVVDVQFDGALPRILNAMEVKVAEGQPRLVLEVAQHLGENTVRAIAMDATEGLVRGQEVEDTGDPIMVPVGPESLGRIVNVVGDPIDERGPVKTKVKLPLHRAAPLFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIESGVIKVDEGAENVFAGSKAALVFGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRNIAQLGIYPAVDPLDSTSRMLDPKVIGSEHYDLARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFTVAEVFTGTKGEFVSLADSIKGFSEIISGAHDDVPEGAFYMKGNIESVLEAAKNM 508          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A7S3HGV8_9STRA (ATP synthase subunit beta n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3HGV8_9STRA)

HSP 1 Score: 778 bits (2009), Expect = 1.200e-274
Identity = 410/475 (86.32%), Postives = 425/475 (89.47%), Query Frame = 1
Query:  106 GRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETS---TAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLAEEA 1521
            G VTQVIGAVVDVQFD  LPPILNALEVTVA   PRLVLEVAQHLGENTVRTI+MEATEGL RGQ   DTGAPIM+PVG  TLGRI+NVIGEPVDE+GPI   V+APIH  AP F +QGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGGYSVFAGVGERTREGNDLYHEMIEGGVIK+ + +     GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST  GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGE HYQTARATQKLLQDYKGLQDIIAILGMDELSEDDK+TVARARK QRFMSQPF VAEVFTG  G FV+L+DTIKGFQEILSG  D LPE AFYM G+I+ V E A KLA  A
Sbjct:   56 GVVTQVIGAVVDVQFDGNLPPILNALEVTVAPGSPRLVLEVAQHLGENTVRTISMEATEGLVRGQEVKDTGAPIMVPVGPGTLGRILNVIGEPVDEQGPIEGNVRAPIHRPAPLFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKVDKATGKPIPGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDQEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITSTGVGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEVHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKAQRFMSQPFHVAEVFTGRGGRFVQLEDTIKGFQEILSGKLDSLPESAFYMSGNIEEVKETAAKLAATA 530          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A7S2EIC6_TRICV (ATP synthase subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIC6_TRICV)

HSP 1 Score: 774 bits (1999), Expect = 1.300e-273
Identity = 405/476 (85.08%), Postives = 432/476 (90.76%), Query Frame = 1
Query:   88 AAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVK---APIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKIS-ET-STAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKA 1500
            AA   TG+VTQVIGAVVDVQFD +LP ILNALEV V +   RLVLEVAQHLGENTVRTIAME+T+GL RGQ C DTGAPI +PVG ETLGRI+NVIGEPVDE+GPI +K K   AP+H  AP+F +QGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINN+A NHGGYSVFAGVGERTREGNDLYHEMIEGGVIKI+ ET ST GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRML PRVIG+EHY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDK+TVARARKVQ+FMSQPF VAEVFTGT G FV L+ TI+GF++I++G HDDLPEGAFYMVG++  V EKA
Sbjct:   20 AATLDTGKVTQVIGAVVDVQFDGKLPKILNALEVEVPEGSERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCADTGAPIQVPVGPETLGRIINVIGEPVDEKGPIFAKGKETYAPLHRSAPSFSEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKINAETGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLTPRVIGDEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEQTIQGFKQIINGEHDDLPEGAFYMVGNVDEVKEKA 495          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A1Z5JNL5_FISSO (ATP synthase subunit beta n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JNL5_FISSO)

HSP 1 Score: 770 bits (1989), Expect = 4.270e-272
Identity = 401/475 (84.42%), Postives = 427/475 (89.89%), Query Frame = 1
Query:  106 GRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPI----VSKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISET--STAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLA 1512
            G+VTQVIGAVVDVQFD +LP ILNALEV V K   RLVLEVAQHLGENTVRTIAME+T+GL RGQ C+DTGAPI +PVG +TLGRI+NVIGEPVDE+GPI     S+  AP+H  APTF +QG++Q+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGGYSVFAGVGERTREGNDLY+EMIEGGVIKI E   STAGSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG+ HY  ARATQKLLQDYKGLQDIIAILGMDELSEDDK+TVARARKVQ+FMSQPF VAEVFTGT G FV L+DTI GF EI+SG +D LPEGAFYMVG+I+ V  KA  +A
Sbjct:   25 GKVTQVIGAVVDVQFDDKLPKILNALEVEVPKGSERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPIFKDKASEKFAPLHRSAPTFNEQGRTQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEDTINGFSEIISGAYDSLPEGAFYMVGNIEDVKAKASTMA 499          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: B7FS46_PHATC (ATP synthase subunit beta n=7 Tax=Sar TaxID=2698737 RepID=B7FS46_PHATC)

HSP 1 Score: 766 bits (1978), Expect = 2.070e-270
Identity = 399/485 (82.27%), Postives = 433/485 (89.28%), Query Frame = 1
Query:   76 HATAAAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIV----SKVKAPIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISET--STAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKLA 1512
            +++ AA    G+VTQVIGAVVDVQFD++LP ILNALEV V     RLVLEVAQHLGENTVRTIAME+T+GL RGQ C+DTGAPI +PVG +TLGRI+NVIGEPVDE+GPI     ++  AP+H  APTF +QG+SQ+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGGYSVFAGVGERTREGNDLY+EMIEGGVIKI E   STAGSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG+ HY  AR+TQKLLQDYK LQDIIAILGMDELSEDDK+TV+RARKVQ+FMSQPF VAEVFTGT G FV L+ TI GF +I++G +DDLPEGAFYMVGDI+ V EKA ++A
Sbjct:   16 YSSTAALWGAGKVTQVIGAVVDVQFDEKLPKILNALEVEVVAGAERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPIFLSKEAEKYAPLHRAAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARSTQKLLQDYKSLQDIIAILGMDELSEDDKLTVSRARKVQKFMSQPFHVAEVFTGTAGKFVSLEKTIDGFSQIINGDYDDLPEGAFYMVGDIEDVKEKAGQMA 500          
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Match: A0A1E7FRE4_9STRA (ATP synthase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7FRE4_9STRA)

HSP 1 Score: 764 bits (1974), Expect = 8.660e-270
Identity = 402/485 (82.89%), Postives = 430/485 (88.66%), Query Frame = 1
Query:   73 FHATAAAAASTGRVTQVIGAVVDVQFDKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQTCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVK----APIHNVAPTFEQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETS--TAGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTVAEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKAKKL 1509
            + +T AAA +TG+VT VIGAVVDVQF  +LP ILNALEV VA+   RLVLEVAQHLGENTVRTIAME+T+GL RGQ C+D+GAPI +PVG  TLGRI+NVIGEPVDE+GPI    K    AP+H  APTF +QG+SQ+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIA NHGGYSVFAGVGERTREGNDLYHEMIEGGVIKI E S  T GSKA LVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRVIG EHY+ ARATQKLLQDYKGLQDIIAILGMDELSEDDK+TV+RARKV +FMSQPF VAEVFTGT G FV L+D+IKGF+EI+SG +D LPE AFYMVG I  V EKA  +
Sbjct:   16 YSSTTAAALNTGKVTTVIGAVVDVQFPDKLPKILNALEVEVAEGNERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDSGAPIQVPVGPLTLGRIINVIGEPVDEKGPIFPDKKIAKYAPLHRSAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKIDEASGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGNEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVSRARKVMKFMSQPFHVAEVFTGTAGKFVSLEDSIKGFKEIISGDYDHLPELAFYMVGGIDDVKEKAANM 500          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig922.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG1_ECTSI8.080e-31190.37ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID... [more]
A0A836CJ45_9STRA8.900e-30587.77ATP synthase subunit beta n=1 Tax=Tribonema minus ... [more]
A0A7S2SJ94_9STRA2.960e-28784.34ATP synthase subunit beta n=1 Tax=Rhizochromulina ... [more]
A0A7R9UFC7_9STRA1.010e-27883.98ATP synthase subunit beta n=3 Tax=Pinguiochrysidac... [more]
A0A7S2GC43_9STRA4.620e-27684.02ATP synthase subunit beta n=1 Tax=Florenciella par... [more]
A0A7S3HGV8_9STRA1.200e-27486.32ATP synthase subunit beta n=2 Tax=Eukaryota TaxID=... [more]
A0A7S2EIC6_TRICV1.300e-27385.08ATP synthase subunit beta n=1 Tax=Trieres chinensi... [more]
A0A1Z5JNL5_FISSO4.270e-27284.42ATP synthase subunit beta n=2 Tax=Bacillariophycid... [more]
B7FS46_PHATC2.070e-27082.27ATP synthase subunit beta n=7 Tax=Sar TaxID=269873... [more]
A0A1E7FRE4_9STRA8.660e-27082.89ATP synthase subunit beta n=6 Tax=Bacillariophyta ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig922contigC-tenellus_contig922:827..10087 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXG1
Preferred nameatpB
PFAMsATP-synt_ab,ATP-synt_ab_N
Model size2510
Max annot lvl2759|Eukaryota
KEGG koko:K02133
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko01100,ko04714,ko05010,ko05012,ko05016,map00190,map01100,map04714,map05010,map05012,map05016
KEGG ModuleM00158
Hectar predicted targeting categorymitochondrion
GOsGO:0000275,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005754,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0010035,GO:0010038,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042221,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045259,GO:0045261,GO:0045267,GO:0046034,GO:0046390,GO:0046483,GO:0046689,GO:0046933,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
Exons10
Evalue8.18e-317
EggNOG OGsCOG0055@1|root,KOG1350@2759|Eukaryota
Ec32 ortholog descriptionATPase, F1 complex beta subunit/V1 complex, C-terminal
Ec32 orthologEc-07_003080.1
EC3.6.3.14
Descriptionproton-transporting ATP synthase activity, rotational mechanism
Cds size1527
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig922.1.1prot_C-tenellus_contig922.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig922 1810..10087 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790156.9443815-UTR-C-tenellus_contig922:826..18091680790156.9443815-UTR-C-tenellus_contig922:826..1809Choristocarpus tenellus KU2346UTRC-tenellus_contig922 827..1809 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790156.9642727-CDS-C-tenellus_contig922:1809..18691680790156.9642727-CDS-C-tenellus_contig922:1809..1869Choristocarpus tenellus KU2346CDSC-tenellus_contig922 1810..1869 -
1680790156.9760928-CDS-C-tenellus_contig922:2083..23231680790156.9760928-CDS-C-tenellus_contig922:2083..2323Choristocarpus tenellus KU2346CDSC-tenellus_contig922 2084..2323 -
1680790156.9876714-CDS-C-tenellus_contig922:2962..31001680790156.9876714-CDS-C-tenellus_contig922:2962..3100Choristocarpus tenellus KU2346CDSC-tenellus_contig922 2963..3100 -
1680790156.9980278-CDS-C-tenellus_contig922:3511..36311680790156.9980278-CDS-C-tenellus_contig922:3511..3631Choristocarpus tenellus KU2346CDSC-tenellus_contig922 3512..3631 -
1680790157.0078633-CDS-C-tenellus_contig922:4139..44061680790157.0078633-CDS-C-tenellus_contig922:4139..4406Choristocarpus tenellus KU2346CDSC-tenellus_contig922 4140..4406 -
1680790157.247097-CDS-C-tenellus_contig922:6392..65991680790157.247097-CDS-C-tenellus_contig922:6392..6599Choristocarpus tenellus KU2346CDSC-tenellus_contig922 6393..6599 -
1680790157.2685325-CDS-C-tenellus_contig922:7188..73831680790157.2685325-CDS-C-tenellus_contig922:7188..7383Choristocarpus tenellus KU2346CDSC-tenellus_contig922 7189..7383 -
1680790157.2809126-CDS-C-tenellus_contig922:8381..84951680790157.2809126-CDS-C-tenellus_contig922:8381..8495Choristocarpus tenellus KU2346CDSC-tenellus_contig922 8382..8495 -
1680790157.290944-CDS-C-tenellus_contig922:9184..93001680790157.290944-CDS-C-tenellus_contig922:9184..9300Choristocarpus tenellus KU2346CDSC-tenellus_contig922 9185..9300 -
1680790157.3057232-CDS-C-tenellus_contig922:10017..100871680790157.3057232-CDS-C-tenellus_contig922:10017..10087Choristocarpus tenellus KU2346CDSC-tenellus_contig922 10018..10087 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig922.1.1

>prot_C-tenellus_contig922.1.1 ID=prot_C-tenellus_contig922.1.1|Name=mRNA_C-tenellus_contig922.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=509bp
MALRYGALVAKRALSGPHAPVAAGFHATAAAAASTGRVTQVIGAVVDVQF
DKELPPILNALEVTVAKDEPRLVLEVAQHLGENTVRTIAMEATEGLTRGQ
TCMDTGAPIMIPVGEETLGRIMNVIGEPVDERGPIVSKVKAPIHNVAPTF
EQQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNI
ATNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKISETSTAGSKATLVYG
QMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSA
LLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSVQAVYVPADDLTDP
APATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEEHYQT
ARATQKLLQDYKGLQDIIAILGMDELSEDDKMTVARARKVQRFMSQPFTV
AEVFTGTPGVFVELQDTIKGFQEILSGTHDDLPEGAFYMVGDIKSVAEKA
KKLAEEAN*
back to top

mRNA from alignment at C-tenellus_contig922:827..10087-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig922.1.1 ID=mRNA_C-tenellus_contig922.1.1|Name=mRNA_C-tenellus_contig922.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=9261bp|location=Sequence derived from alignment at C-tenellus_contig922:827..10087- (Choristocarpus tenellus KU2346)
ATGGCTCTCAGATACGGTGCATTGGTAGCGAAGAGGGCCCTCTCCGGCCC CCATGCACCCGTCGCGGCTGGTGAGTTAGGAATCTGGTCAATTTTTTGGG GGTGCTGAGGGAATTGTACTGGTTCACCCAATTTTCGACTGCATGCAAGG GCATGTGTGTTTCCTCTTTATTGTGGGCTGTAGAAGAAGCATGGCATAAA AATTGCGCTGCGTTTTTCACAGTAGTTTGGTTTTGCAATATCGCTCCTCC CTGTGGTTGGAAACAAGAGCGTCACCAAAAAACCCACAATACACGGATTC GTTCTTAATGACATAATATCTGAGGCACGTAGTCGTTGCCAATGTTTTTG TGCATGATAGAAACAAACATTTTCACACCCATTTTTTTGGTGAAAGTTTG CTTGTATGCGAATTGAGTCTAGTGCCCAGAACGTTTTTCCCGCAACCACT TTCATGAAGTTTTTTCCGAACTTGCTTGGGGCTGGGCAATATTCCTTGCA CTTCGAGTACTTCCCCCTGTTTGATATCTTACCTTTTGTGTAAGGGAATG GTTGCATATTGCATAGCCTGACTTCACTGTGACAGGCGCATCAACGGTTG TTCTTCCAATTGAACATTCTACGTACCATAAAGGTTGTGCGTAAGTCTTC CCCACGACACACTCATGTAAAGATACAAGCACATGCGAGAGATTAAAATT TCTGGCGTTCGATGCAATTATATGGGATTGTATGGATGTACCCAGTTGTT CCATAACCACATGCGAATTTCATCTCATGATCCGCAGGTTTCCACGCCAC TGCTGCCGCTGCGGCCAGCACTGGTCGGGTGACCCAGGTCATCGGTGCCG TTGTGGATGTTCAGTTCGACAAGGAGCTTCCCCCCATTCTCAATGCGCTC GAGGTGAAATAAATACTTCTCCATCCACACCCAACAAGACGCAGAAGCAA CATCCTTTACGTCGCTCTAACCTTCTGAGTCGGTGCCCTTAAGGAAATCC AACTCTTAAACATCATGGAGATTCAATACTGGTCAAAGTGCAGACTACCT TTTTTGCTTTAAAAAGAAACAGTCACATGTATGGTCGAAATCCTACACTC ATCTACTTAACACAAATTGGAGCAAGAGTCTGATCTATACCTCGAGGACA AGGACAAGACCAGATAATGACTCTTAATTTACTCTGTTGAGGGTTGATGA CCTTTTTTATTTGGACTGTACCTCCAAAAAACGATTGTAAGTCGGTGAAC ATCATCAAATAGGATGACAATGTATCAATCAATTTGTGATACTCTTGTCT CACAGGAAGATGAAATTTAATTGAAGGATCTTCTGCTAAGAAAAAAGATG GTAGTGTTCAAATACACATGATTTTTGTGATACCAGATGCTTTCCCACCA TGCGTGATACGAAAAAGTCATCCCAATTTTTGGGCCCTTGAAACTCGAGT GATGTGTGAAAAGCCTCTTTTATCATTTGCATCCCCATCCCCATCCCCAT CCCCTTTCTCCTCTTTACTTTTTTTGTTGCCTTCATTCCAACTCTCTTCA CTCCTCCCCGGACATCACATATTGGATGTTGTGTTATCAAAGGTGACAGT GGCGAAGGATGAGCCCAGGCTTGTGCTGGAAGTTGCCCAACACTTGGGTG AGAACACTGTTCGCACCATTGCCATGGAGGCCACTGAGGGGCTCACTCGT GGACAGGTGTGTAAGCAATTTATTCTTGTCCAGATGCGTGTAGAAGAGCT TGTTTTTCTTAGTCTGATTCTGCTTCCTGCGATAGCGGAGGAAGGGTTTG GGTTGTTTGTGTAATTTTTTTAATTTTTGCTGGGGGGGGTCAGGTCAGTT CAGTTAGAGGTGTGTTCATCGTTGTTTCTTGTACATTGTATGTACTTGAA GATAATCATGAAGACTCACAAGCTAGCTTTTGCCTGTATTTGGGTCAGTT GGTGATAACATGAATGCTTGTATTACTCACTGTATGTCTACCATAGTTGG TTTGTGTACGAGCTAATCTACGGAGACTGTATTTCTTGGTAGGGTTAGGG AGAGTACATGTGCATGACTCTTAGATGTCACACATGGGAAGATCTCTCAG TCGGTCATACCTGTCTAGCAGTCAGGGTCCTCTTTTTTCTATATTATTTG GATCTGTTCAAGACAAGCAAGTTAATGATAACTTCATAGTGTGTTGTGAA TCCTCTTTATCAACTCCCTTTAGGCTTCCTTTCCTGCCCGCCCACCCCAA CTCTTGGTTTTCAAAGATACGCATTTCTTGATCCTGATCTTCCCTTTTTA ATATTTTTTTGCAAAAGATGTAATGTAACCAGTCTCCCCCCCCCATAAAA AGTTTCCTTCCACCTCCCCCTCTGTGCATTTAGCATGCTTTTAACCTTAC CAACATTTTTATCTTTTTATAACCTTGCCAACATTTTTGTCTTTTTTTAA CCTTAACAACTTTTTTTTATCTTTTATAAAATCTTACCTACATTTTGGTT ATCTTTTTTTAACCTTAACATTTTTGTTGTTCTTCTTTGACCTTCCCAAC TCTTTTGTCCTTTAACCTTACCAACATTTTTGTTGTCCTTCTTTGACCTT CCCAACTCTTTTGTCCTTTAACCTTAACATTTTTGTTGTCCTTCTTTAAC CTTAAAATTTTTTATTCTTTTTTCTTTTTTTGGTTTAAAAATCTATTGTG GAAGACGTGTATGGATACAGGTGCACCCATCATGATCCCTGTGGGAGAGG AGACTCTGGGTCGCATCATGAATGTGATCGGCGAGCCTGTGGATGAGAGA GGGCCTATTGTGTCTAAGGTCAAGGCTCCCATCCACAACGTTGCACCTAC CTTTGAGCAGCAGGGAAAGAGTCAGGAGATTTTGGTCACTGGGATCAAGG TCAGTTTTTTTGGAACACTGTATTATTATTATTATTTGGTGTTGAAGGTG GTTGTGTAGTGATTGTGGTCAATCAAGGTGGTATGTATGCAAAATGTTTT TGACTATTTGTAAGTGATAAATGTTTTGCAGGGGTTAGGGTCCACCGAGT CTCAACAGGTGAGGGGGTATGGGTCAGTTACCATTACGACCTTGGGTGTA TTTCTGTCTCGACTTAAAAAAAAAATCCTTGTTGGTTTGGGAGGAAATTG AAGGATGTTTTTTTTAAGGTTGTGAAACCCCTAACCCTGATAGTGTTGCT ATATATTTTCTACAATTATCAAACTTGTAGGAAGATTTAGGGGCAGCAAA TTGTTAATGGTATATGTTGTGGAAGGATAGAATCTGTTGAACTATATGGC AGAACAAAAAAGTTGAAGGGTTCTATAATTTTATGAGATCGATGTTTTTT ACTTGTTGACAACATCAAAGAGTTGCATCGTGCCCAAAAGTGTATTGAGG TTACTGCTCAAGCCAAACAGTCTGGACTTGCAACCATTTCCCTCCCCTTC TCCCCCTCAATCTATTACACTTGAAAATGCCTGCCCAGGTGGTAGACCTC CTGGCCCCTTATGCCAAGGGAGGTAAGATTGGGCTGTTTGGAGGTGCTGG TGTGGGTAAGACTGTGGTTATCATGGAGCTGATCAACAACATTGCTACCA ACCATGGTGGCTATTCCGTGTTTGCTGGAGTGGGGGAACGCACCCGTGAG GGTAACGATCTTTACCATGAGATGATTGAGGGAGGAGTTATCAAGGCAAG AATTCTCTTTTATTTTCTTATTTTCCAAATCCGTGTGTACAACCTCGGCG GGCTGCTGATACTTGGGGGTCCACCCTGTTGACAGCTTAAGAGTCTCTGA TTTTCACTCCTTGCATACGTTACATCGCTGTTCCATGCCAAAGTAGCATC GTTGATCTCCAACAATACACGCTTCTTGAGATGCTTGATAGCTGATGGGT TAATGTGTCCCAATATGTTGTGCTCCAATTAGATGGAATCGATCTTGACG TGTCGTGTTTTGTGTATGTGTCCTCTTGCTGAGTAAGGTTGTGTATCCTC TATTATTATTACTATTTTGAAAGGGGATTTGGAATGTTGTTTTGGTTTGG TGGGGTTTCTTTTTTTTTGTGAGATTGATTGTTTTGGTTCAGAGATGGCA TCGCCTTTATCTGCATTTACCATGAGTTTTGCACAAAACATAATGTTCTG TACTACTGAATCAAAGTGTTGGTTGAGATTTTTAGTTTTGTTTATCCATC CGTGATTAACCGCTTTTGTTTTGTTTTCAGTTATTTTTCTGGAATTGTTC TGAGTTCTTTGTGTAGTTTGTACAGTAACATGTGTTACGTACATTATTCA TATGTGGGGTAAGGTGCTGTAGAGGGGACGGCCTTTTGTATCTTGAGACA TTGTCTTGGTGGCAGTTGTATTTGGTAGTTGAGGGTAAACTTCCTTCTTT GATGTTTTACGTCATATGCTTTAGTTCCAACAGGGGGTTTGCAGTAGTCT GAATCAGTGGTATGGTTTCAGTGGTGATGGTTCTCTGAGGAGAAGCAATT CTAGACAGTAACTGAGTAATGAGTAAGTGGAAGCACATTACTTTTTTTGC TGATAAATATGGATTACCTGAACTGCAACCATAGATTTTCTGGTCAACTT CTTCCACAAACATGATGTGTTACAAATTCATAGAGTTGCAAAGGATAGTG GTGATGTTGACATGGGAGGCAAGTTGAGTTCCGAGTTAGAACTTTGAGTG TGATTATACTCGAGGTTGATCTTATCTTGTTGGGATGATTCATATTTCTT TTTCAGCTATGTTCGGGAGAAGATAGTGATGATTTGATCTTTAAGGCAAT GATATATCGTAACAACACGTTAGACTTCAGAAGCCTTGTGCTGAGAACCT TAAACTATACGAAGCTGAGCCTGAAAAATATGTATTGCAGCTATGTGTTG CTTTGTATAGTCCTGAAAAAGATGTATTGCAGCTATGTGTTTATGTGCCT GTTCGTGAGGGAGAATTACTTCGAAATGCTTGTGATATGTGAAAGCAGTT AAGTACGTGACTTCTTTTTGAAAGCTATGTTCAGGAAGATCCTGATGATG TGATCTTTGAGGCAATGATATATCGTAAAACACGTTAGACTTCAGAAGCC TTGTGCTGAGAACCTTAAACTATACGAAGCTGAGCCTCAAAAAGATGTAT TACAGTTACATTCCTATTGAAGAGAGACTGGACCAGTGAAACGTGAGAGA TGCCCCTTTGTTTATGTGTCTCTGAGGAAGGTGATACAATGTTTTGTGGC ATTTATCAACATAGTTTCCTTGTCTCTCTGACATCTCACGCTTTACTTTA GAGCTCCAAACCTGTAAGTGGAACCAACTGTGATGCACTCTTGCTTGTCC ATGTGTTTGTGAATTTCATTCCCAGAGAAGCAATTTCCTAATAGTATTAT TATTTACATACTGGAGAGCATTCAAAAAGAACAATGAATGTGTTCCGTTG GTTCTTACCTTGCATGTTTGAGTCCAAGTGCTGATAAACCTCAGCTTGAT GTCTATCCCCTCATTTTCGCTTGGGAACATTTAACATATCTGAGTGTCAA TGTACGTTGTTGCATTACCTATTCTAGTACTATATTATCTGCTTCATTAA CCCCAAATTCAAATCCAAATCCTTCCCCCCCCCCCCAAACTTTAATAATT TTGTCCTCCTTATTTCATCACCGTTTTGCAGATCTCTGAAACTTCCACAG CAGGGTCCAAGGCCACCCTTGTGTACGGACAGATGAACGAGCCCCCAGGA GCCCGTGCCCGTGTGGCCCTGACTGGTCTGACCATTGCTGAGTACTTCCG TGATGCTGAGGGTCAGGATGTGCTTCTCTTTGTCGACAACATTTTCCGTT TCACTCAGGCTGGTGCTGAGGTGTCTGCCTTGCTGGGACGTATCCCTTCT GCTGTGGGTTACCAGCCCACTCTTGCCACTGACATGGGTACCCTTCAGGT ATGGTAGGATTGGGGGGTTGTTTATGTGTGTGTGTGTGTGTGTAGCAGAG GGCTTGGTTATGGGAGGAATAGGTTGTAGTGAGATTTGATGTAGGATTTG TCTGTTTTTTGGAATTGTTTGGTTGTTGGATTTTCTCTTGAATGGGATGT GTTGAGATTTTCTATGATCAATTGTTTGGAGAGGGGGGAAGATTAGTGTA GTTGTGGTCTTTGTGTTTTGTGTGTGTGTGTGTGTGTTTTTTTTTTGTGC ATGTCAAGGTTTTCAAACGTTGATGACCTTTGACAGTGACAGTGGCAGTT TTCAGATACACTTCTTTTTGATCTGTTGTCTACTAGAGGTGAAAACTATC TCATTTTCTCTAAGGCTTTTTTTTTTCTAAAATGAACAACCTACGGTGGT TTGGATTTCAGTTGAATTGGACACATTTTTATGGCTTTGAAAGTCGAATT ATTATTCTCTTGATGATTAATGACCCCTTGTTCTTTCTCTTTCCTTTTTT TTACAGGAGCGTATTACCTCTACCAACAAGGGTTCCATCACCTCTGTGCA GGCTGTGTACGTGCCAGCAGATGACTTGACTGACCCTGCGCCAGCCACCA CCTTTGCTCACTTGGATGCCACCACTGTGAGTAGCATGACCAAACCTTGG TTACAGTTGTTACTCCCCTGTTTTGTAGTGTGTTCTGAGTTTTTAGTTGG TTTCTTTCATGGACGTCTTGAACTGTGAAAACTTTTCGAATTTGAGATCG TTAAATGACTACAACCTTTTTGGTTTGGTATGTTACTGGAAGGCGTGACG AACCTTTTTGGTGTGAATGGGATGCTGAGAGCTGTTGCCGCCTTGTATTG GAAGTGAAACGAGTCCTTAATCCATTTCAGTCATGTAGGTGTGAATTTGG TGGAATGGTGGGTTGATGCCTTTTCATTCCCACCTTGTGTGTAGTTGCAA GAGCATACAAACGTATTGTATTTAAGTGTTTCTATCTGTTTTTACAGGGT CATTTAACTTCTCTTTGGCGTCTTTTGTTTATCACAGGTGCTTTCCCGTC AGATTGCTGAGTTGGGTATTTACCCTGCTGTGGACCCTCTTGACTCCACC TCCCGTATGCTTGACCCACGTGTAATTGGAGAGGAGCACTACCAGACCGC CCGTGCTACCCAAAAGCTACTGCAGGCATGTTGAAAAAAATTGAGTGAAG AGTGTTTTGAAAGATGATCGTTCTTGTGTACTGAGTCATTGTCATTTGTT GTTTGGGTTTGTTGATCTTGGTTTGAGTTTAATGTGAACGCTTGTTGCTT GTTGAGATTCAAGAAAGTGCTGCAGTGTAGGTTTAGAATGTAGATTATCT TTGATCTTTGAACATGACCGCAGTGATTGAACTTCAATGCGTAGGTAAAC ATGCTGTAGTTTTCAAGTTGTAGTTTTCAAGCTTTGGTGTGTGTGTTGAA TTGTGATATACGTTGGTCTTCTTGGTGCCTTGAGTAGGAACATCTTGGGT ATACTCTTTTCTCAAGGAACAGTGCCTAGATTGTTTTGTCCGGAGGGCAT ACTATACTCATACTCCCTCTTTGCCTTTCTTACTAGGAGAGAGCGGTAGC CTCTCTGTCTGTGTCTTGTGTTTTTTTGTTGGTACTGATTTGTTTTTCAT CCTCTTGTCTCTCTTTGATGCCCAAGTATGATCTGATATAAGACAAGGCT TGTGTATAGCACGTTTTGCACTGCGAGTATGATAAAGTGTTGTGTAATGC TTGTGTCATCATTTCTGTCATCATCCTTACATACTTGCGTGGTAATTTGT TTGTTTGAGAGCAGGACTACAAGGGTCTGCAGGATATCATCGCTATCCTG GGTATGGATGAGCTCTCAGAGGATGACAAGATGACCGTTGCCCGTGCTCG TAAGGTTCAGCGTTTCATGTCCCAGCCCTTCACTGTGGCTGAAGTCTTCA CAGGTACCCCAGGAGTGTTTGTGGAACTGCAAGACACAATCAAGGGCTTC CAGGAGATCCTGTCTGGGACTCACGATGATCTTCCTGAGGGTGCCTTCTA CATGGTACGTTTGCGTGGAGTGGTTGGATTGATTGAGGTGTGCTTGTGGA TGTATACTAAATATTTGTCTTTGATTTAAATTTTTTTTGTGCAGGTTCTG TTCTGTTCTTGACGGGTCGGTAAGTAAGTACTGACTTTGAACATTTTTGA GAGATGAGAAACCCTAAAATTTCCGCCCCCCTGCCCCCATTGATTGATTG ATGTTTTTTTGTTGATAGGTCGGTGACATCAAGTCTGTTGCAGAAAAGGC TAAGAAGTTGGCAGAAGAGGCCAACTAAGGACATCAAACAGGATGAAAGA GGAATGCGCAACATCTACCACTGTGTCCTCTGATGAGGCCCAAGTTTGTT CCTAGTCTCTTTGGCAGTTGTCAGGACACACTATGATAGGACGTGATGAT TGCGGCTCATTCACCAATAGGGATGCTAAGGTTCATCAGGCATAGGGGGT GCAATAGTGAAGTTGTGATGGGGATTTTGTTGTAGGGTGTTGACCAAGTT GTCAACTCATGTTCTTGTTTATTTGAGCAATACAGTTGCAAGTCCCTATT GCCCTCATTCCTTCAGGACTGGGCGTGCATATCCATAGGTTGACACTGAT GGTGGTTCAGAAATAGGCGTTTGGTTAGGTTTGATGGATGGATGGCAAGA ACATGAATGAATTTGGAGTAAGCTCCTTCGTATTGAAGGAAATAATCGAT CTGTGGTAGATTTACTTCTTTTTTATTGACTCGTCTTTTATCTTTTTGTT GGTAGTATATCGTGGAGGGAACACAAAGGATGTCAAGGAGATGAGAGAGG CGATCAGCTTGATTAGAAACAAGGAACGTGGGTCTTTTTGAGGAAGGTAA GTGTCCTTCAGTGTGAGGGCAACTTTGCTGTGCTGGTGGGGTCCAATACG GACATTACTGTGCAGTAACGTGGACAAGATACTCAAAATGATGAACAGTG GGATAAGCCACCTGCAAATGTAACTTGATGCATTTCTTTCACTTGTTTTT TTTCTGATATATTGAGAGAAACTCAAGCGAAACATGTTGAATCTTTGCTC CCTTAGAGAGGGAATTTTTCAAGTGTACAACAGTCTGAATAATATTGGAG AGGGTAGGAATCAACAGGGTTTGCTATCCTTATTGCCTCATCCCATGACC CTAATGCATCATATAGTTGCCACCGGCAAAATCCAGTGGTGTATGCATTC CATGATCAATTTTGTGAAATCATGAGGCATGTCTGTAACAAAAGAAATCG AGATTAAACAT
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig922:827..10087-

>mRNA_C-tenellus_contig922.1.1 ID=mRNA_C-tenellus_contig922.1.1|Name=mRNA_C-tenellus_contig922.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1527bp|location=Sequence derived from alignment at C-tenellus_contig922:827..10087- (Choristocarpus tenellus KU2346)
ATGGCTCTCAGATACGGTGCATTGGTAGCGAAGAGGGCCCTCTCCGGCCC
CCATGCACCCGTCGCGGCTGGTTTCCACGCCACTGCTGCCGCTGCGGCCA
GCACTGGTCGGGTGACCCAGGTCATCGGTGCCGTTGTGGATGTTCAGTTC
GACAAGGAGCTTCCCCCCATTCTCAATGCGCTCGAGGTGACAGTGGCGAA
GGATGAGCCCAGGCTTGTGCTGGAAGTTGCCCAACACTTGGGTGAGAACA
CTGTTCGCACCATTGCCATGGAGGCCACTGAGGGGCTCACTCGTGGACAG
ACGTGTATGGATACAGGTGCACCCATCATGATCCCTGTGGGAGAGGAGAC
TCTGGGTCGCATCATGAATGTGATCGGCGAGCCTGTGGATGAGAGAGGGC
CTATTGTGTCTAAGGTCAAGGCTCCCATCCACAACGTTGCACCTACCTTT
GAGCAGCAGGGAAAGAGTCAGGAGATTTTGGTCACTGGGATCAAGGTGGT
AGACCTCCTGGCCCCTTATGCCAAGGGAGGTAAGATTGGGCTGTTTGGAG
GTGCTGGTGTGGGTAAGACTGTGGTTATCATGGAGCTGATCAACAACATT
GCTACCAACCATGGTGGCTATTCCGTGTTTGCTGGAGTGGGGGAACGCAC
CCGTGAGGGTAACGATCTTTACCATGAGATGATTGAGGGAGGAGTTATCA
AGATCTCTGAAACTTCCACAGCAGGGTCCAAGGCCACCCTTGTGTACGGA
CAGATGAACGAGCCCCCAGGAGCCCGTGCCCGTGTGGCCCTGACTGGTCT
GACCATTGCTGAGTACTTCCGTGATGCTGAGGGTCAGGATGTGCTTCTCT
TTGTCGACAACATTTTCCGTTTCACTCAGGCTGGTGCTGAGGTGTCTGCC
TTGCTGGGACGTATCCCTTCTGCTGTGGGTTACCAGCCCACTCTTGCCAC
TGACATGGGTACCCTTCAGGAGCGTATTACCTCTACCAACAAGGGTTCCA
TCACCTCTGTGCAGGCTGTGTACGTGCCAGCAGATGACTTGACTGACCCT
GCGCCAGCCACCACCTTTGCTCACTTGGATGCCACCACTGTGCTTTCCCG
TCAGATTGCTGAGTTGGGTATTTACCCTGCTGTGGACCCTCTTGACTCCA
CCTCCCGTATGCTTGACCCACGTGTAATTGGAGAGGAGCACTACCAGACC
GCCCGTGCTACCCAAAAGCTACTGCAGGACTACAAGGGTCTGCAGGATAT
CATCGCTATCCTGGGTATGGATGAGCTCTCAGAGGATGACAAGATGACCG
TTGCCCGTGCTCGTAAGGTTCAGCGTTTCATGTCCCAGCCCTTCACTGTG
GCTGAAGTCTTCACAGGTACCCCAGGAGTGTTTGTGGAACTGCAAGACAC
AATCAAGGGCTTCCAGGAGATCCTGTCTGGGACTCACGATGATCTTCCTG
AGGGTGCCTTCTACATGGTCGGTGACATCAAGTCTGTTGCAGAAAAGGCT
AAGAAGTTGGCAGAAGAGGCCAACTAA
back to top