mRNA_C-tenellus_contig9131.1.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A835ZG63_9STRA (Thioredoxin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG63_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.080e-26 Identity = 77/240 (32.08%), Postives = 114/240 (47.50%), Query Frame = 3 Query: 276 QIYADMVCPWSYIGSENMLKGISST----KSASFHVTWHPYMMAAGIPEGGQDLDSFLSS-FSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQ-DPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSLL 977 QI++D++CPW YIG+ + K I+ ++ F W PYM+A G+ E G+ + F+ + RD D + ++ S G L R+++NS A RL++LA EQ + G+ QT + +F AYF +I+ + L++LA GV G GS + E V G P+F ISR+GYPG +R GAQ PQ F +AF SLL Sbjct: 1 QIFSDIICPWCYIGTRLLWKAIAELSQNHRATEFRFKWRPYMIAPGVGEKGEAMRDFMQKRYGKALNRDKDLSEAALEAGVSLEGGLLS------------------------RQMWNSAAAHRLVQLAGEQQEQQGQPDLQTAMMEALFEAYFHREQNIAALACLQDLADKVGVSCEG---LSTGSVAALAATYKEPAEARGVKGVPFFCISRQGYPGSFRFSGAQFPQTFVRAFQSLL 213
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A1G9FM08_9RHOB (Predicted dithiol-disulfide isomerase, DsbA family n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1G9FM08_9RHOB) HSP 1 Score: 89.4 bits (220), Expect = 1.270e-16 Identity = 70/241 (29.05%), Postives = 113/241 (46.89%), Query Frame = 3 Query: 264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTID--KRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEET--RVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSL 974 + + I++D +CPW YIG ++ + + + F V WHP+M+ +P G D +L A+ G P+ V R + RAAGL ID R+ ++ +A RL+ A G +G+QT + +FRAYF DIS+ EVL ++A +AG++ A LR SD D+ + R + V P FV+ G + + GAQ P+++ K + + Sbjct: 1 MVRLDIFSDPICPWCYIGKAHLDRALEARPDHPFEVVWHPFMLNPDMPPEGMDRREYLE---AKFGG-PEGAAEVYGRIREAA-------------------RAAGLDIDFDAIRRTPSTLDAQRLIHWA------GIEGRQTPVVAGLFRAYFNEGRDISDHEVLADVADSAGLD-AAMILRLLASDADVEEIRARDAWAREHGVRAVPTFVVG-----GRHAVPGAQPPELWLKVIDEI 206
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A1H7Y589_9RHOB (Predicted dithiol-disulfide isomerase, DsbA family n=1 Tax=Loktanella fryxellensis TaxID=245187 RepID=A0A1H7Y589_9RHOB) HSP 1 Score: 89.4 bits (220), Expect = 1.330e-16 Identity = 68/222 (30.63%), Postives = 101/222 (45.50%), Query Frame = 3 Query: 264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTI--DKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNK--VIGAPYFVI-SREGYPG 914 + + I +D +CPW YIG N+ ++ F + WHP+ + +P G D S+L A+ G +A R+ AT+ AAGLT+ DK + N+ NA RL+ A G +G QT + ++F AYF DIS+ EVL +LA TAG++ A R SD D+ + K V P F++ S+ PG Sbjct: 1 MVKLDILSDPICPWCYIGKANLFAALAQVPDHPFTLEWHPFQLNPDMPHAGADRRSYLE---AKFGGRAEAVRAYAPVATA--------------------AEAAGLTLNLDKITRTPNTLNAHRLIHWA------GIEGNQTPMVDLLFAAYFVDGRDISDPEVLSDLADTAGLD-AALVRRLLASDADVTAIRDRDAHSRKMGVTAVPTFIVASQHAVPG 192
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A5A7PDA8_STRAF (DSBA-like thioredoxin domain containing protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PDA8_STRAF) HSP 1 Score: 88.6 bits (218), Expect = 3.450e-16 Identity = 70/255 (27.45%), Postives = 111/255 (43.53%), Query Frame = 3 Query: 225 VIMPNDMEHSTSPLFNVQIYADMVCPWSYIGSENMLKGISSTKSA-SFHVTWHPYMMAAGIP-EGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAA--GLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDG--KQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNS 971 VIM + S L + + AD VCPW ++G +N+ K ISS+ +F + WHPYM+ P EG + +L+ F RA ++ I L L + + G T+D R IY + GK G KQ +L ++ YF I + + L AK G+E A ++L + + E +E+ + + G P++V++ G Y+L G Q P+ F KAF + Sbjct: 12 VIMASSNNGSAKKLIQIDVSADTVCPWCFVGKKNLDKAISSSDDRYTFEINWHPYMLNPSAPKEGVVKKEFYLNKFGP--------------RAVQMEARM----TEIFKGLGLEYDTSGLTGNTLDSHRLIYFA----------------GKQGLDKQHKLVEELYLGYFTQGKYIGDRDFLVESAKKVGIEGASEFLEDPNNGVNEVNEEIEQHSAH-ISGVPHYVVN-----GKYQLSGGQPPESFLKAFQA 226
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A2D9YLI5_9RHOB (Polyketide biosynthesis protein n=1 Tax=Maritimibacter sp. TaxID=2003363 RepID=A0A2D9YLI5_9RHOB) HSP 1 Score: 86.7 bits (213), Expect = 1.140e-15 Identity = 67/243 (27.57%), Postives = 112/243 (46.09%), Query Frame = 3 Query: 264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLS-SFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKR--RKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKA--GDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSLL 977 + + I +D +CPW YIG N+ + + F + WHP+ + +P GG D +L F ++G A VV+ A AAGLTID ++ ++ +A RL+ A G + +QT + +FRAYF+ DI +++VL ++A +AG++ A L+G DI G R + V G P FV+ + + + GAQ P+++ + L+ Sbjct: 1 MVKLDIISDPICPWCYIGKTNLDRALEKIGDHPFEIEWHPFQLNPEMPAGGMDRTEYLEHKFGGRDGA-LKAYAPVVEAA-----------------------EAAGLTIDFAAIQRTPSTLDAHRLIHWA------GLEQRQTPVVSALFRAYFQEGRDIGDVDVLADIADSAGMDAAVVRQLLQGDADRDDIRGRDAW-AREHGVTGVPTFVVGQR-----HAVPGAQPPELWVQVITELM 207
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A6N7JIS3_9PROT (DsbA family oxidoreductase n=1 Tax=Niveispirillum sp. SYP-B3756 TaxID=2662178 RepID=A0A6N7JIS3_9PROT) HSP 1 Score: 85.5 bits (210), Expect = 2.500e-15 Identity = 68/233 (29.18%), Postives = 104/233 (44.64%), Query Frame = 3 Query: 273 VQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFL-SSF-SAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGV--EKAGDYLRGCGSDTDIFGEML--EETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVF 953 ++IYAD+VCPW YIG M + + S + W P+ + +P GG D ++L + F SA+ R A +V++A + G + +D R+I N+TNA RL+R A+ + G+ T++ ++ AYF DI +L A G+ E+ YL S+ D+ ++ R V P FV R Y L GAQ PQ F Sbjct: 3 IEIYADLVCPWCYIGKRRMEQALEQRPGLSVDIRWMPFQLNPELPAGGMDRATYLVAKFGSAERARQLSA---MVEQAAIKEG--------------------LPMRLDLARRIPNTTNAHRLVRFAE------RFGRSTEMITTLYEAYFAQGLDIGATSILLQQAMATGLPEEEVASYLN---SEADMAAIRTGDQQARQLGVQAVPCFVFERR-----YALSGAQEPQAF 198
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A239DRI4_9PROT (Predicted dithiol-disulfide isomerase, DsbA family n=1 Tax=Azospirillum sp. RU38E TaxID=1907313 RepID=A0A239DRI4_9PROT) HSP 1 Score: 83.2 bits (204), Expect = 1.530e-14 Identity = 67/231 (29.00%), Postives = 103/231 (44.59%), Query Frame = 3 Query: 273 VQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFL-SSF-SAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGV--EKAGDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVF 953 ++IYAD+VCPW YIG + + + S + W P+ + +PE G D ++L + F S R A +V++A S+ G L +D R+ N+TNA RL+R A+ + G+ T++A +F++YF DI +L LA G+ ++ YL +D ++ R V P FV R Y L GAQ PQ F Sbjct: 3 IEIYADLVCPWCYIGKRRLEQALELRPGLSVDIRWMPFQLNPELPEAGMDRATYLVAKFGSIDRARQLSA---MVEQAASKEG--------------------LPLRLDLVRRTPNTTNAHRLVRFAE------RFGRSTEMASTLFQSYFAQGLDIGATSILLELAIANGLPGDEVATYLSS-EADKAAIRAGDQQARQLGVQAVPCFVFERR-----YALSGAQEPQAF 198
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A2T6AW49_9RHOB (Putative DsbA family dithiol-disulfide isomerase n=1 Tax=Allosediminivita pacifica TaxID=1267769 RepID=A0A2T6AW49_9RHOB) HSP 1 Score: 82.8 bits (203), Expect = 2.410e-14 Identity = 63/242 (26.03%), Postives = 115/242 (47.52%), Query Frame = 3 Query: 264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTI--DKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNKVIGA---PYFVISREGYPGVYRLVGAQGPQVFRKAFNSL 974 + + I++D VCPW YIG + + + + + F V W P+M+ +PE G+D L + +A R +++ A AG+T+ DK + +S +A RL+ G +G QT + +F+AYF DIS+ +VL ++A ++G++ AG R SD D E++E+ + +G P F+++ + + + GAQ P++++K + L Sbjct: 1 MIQLDIFSDPVCPWCYIGKGYLDQALQANPNHPFQVRWLPFMLNPEMPEAGRDRREHLEAKFGSKEAAAEAYRPILEHAEK-----------------------AGVTLNFDKIERTPSSLHAQRLIHWG------GVEGVQTAVVSALFKAYFVEGRDISDFDVLCDIADSSGLD-AGLIARLLKSDADR-DEIVEQDAAARGMGVSAVPTFIVASQ-----HAVPGAQPPELWQKVIDEL 206
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A4U7N6K1_9RHOB (DsbA family oxidoreductase n=1 Tax=Pelagicola litoralis TaxID=420403 RepID=A0A4U7N6K1_9RHOB) HSP 1 Score: 82.0 bits (201), Expect = 4.350e-14 Identity = 65/242 (26.86%), Postives = 107/242 (44.21%), Query Frame = 3 Query: 264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSS-FSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTID--KRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNK--VIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSL 974 + + I +D +CPW IG + +++ F V WHP+ + +P+ G D +L + F + D+A Q+ I GL ID ++ N+ +A RL+ A G +GKQ + +F AYFK DI NIEVL ++A +AG++ A ++ SD DI +T + V P F++ G + + GAQ P++++K L Sbjct: 1 MIKLDILSDPICPWCLIGKTQLETALAAEPDHPFTVEWHPFQLNPDMPKDGMDRRLYLETKFGGK------------DQAIKVYAQIAQHAEKI------------GLEIDFGAIKRTPNTVDAHRLIHWA------GIEGKQNDVVDALFAAYFKEGRDIGNIEVLADIADSAGLD-AAVVIKLLQSDADIDNIQKRDTHSREMGVTSVPTFIVD-----GKHAVPGAQAPELWQKVIAEL 206
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A8J5LMQ5_ZINOF (DSBA domain-containing protein n=5 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LMQ5_ZINOF) HSP 1 Score: 83.2 bits (204), Expect = 6.200e-14 Identity = 73/249 (29.32%), Postives = 111/249 (44.58%), Query Frame = 3 Query: 243 MEHSTSP--LFNVQIYADMVCPWSYIGSENMLKGISSTKSA-SFHVTWHPYMMAAGIP-EGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEE--TRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNS 971 M HST L ++ + +D VCPW +IG +N+ K I S K +F V WHP+ + P EG D + F A +++ R T L F+ + + L G T+D R I S + G D KQ L +F YF I + +VL + A+ G+E A + L + E LE+ +R+N G P+FVI+ + Y++ G Q P+VF +AF + Sbjct: 64 MAHSTGEKKLISIDVSSDTVCPWCFIGKQNLQKAIDSAKDRFNFEVRWHPFFLNPDAPKEGINKTDFYKQKFGASQ------YEAMMSRMTKIFNSLGFE--YDTSGL-------TGSTLDSHRLITFSASQ-------------GYD-KQNALVEELFLNYFCQGKYIGDRKVLLDAAQKVGIEGASELLHDPTKGIEEVNEELEKYSSRIN---GVPHFVINEK-----YKISGGQPPEVFLRAFQA 275 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9131.1.4 >prot_C-tenellus_contig9131.1.4 ID=prot_C-tenellus_contig9131.1.4|Name=mRNA_C-tenellus_contig9131.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=534bp MPNDMEHSTSPLFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHback to top mRNA from alignment at C-tenellus_contig9131:602..3742- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9131.1.4 ID=mRNA_C-tenellus_contig9131.1.4|Name=mRNA_C-tenellus_contig9131.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3141bp|location=Sequence derived from alignment at C-tenellus_contig9131:602..3742- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9131:602..3742- >mRNA_C-tenellus_contig9131.1.4 ID=mRNA_C-tenellus_contig9131.1.4|Name=mRNA_C-tenellus_contig9131.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1602bp|location=Sequence derived from alignment at C-tenellus_contig9131:602..3742- (Choristocarpus tenellus KU2346)back to top |