mRNA_C-tenellus_contig9131.1.4 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9131.1.4
Unique NamemRNA_C-tenellus_contig9131.1.4
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A835ZG63_9STRA (Thioredoxin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG63_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.080e-26
Identity = 77/240 (32.08%), Postives = 114/240 (47.50%), Query Frame = 3
Query:  276 QIYADMVCPWSYIGSENMLKGISST----KSASFHVTWHPYMMAAGIPEGGQDLDSFLSS-FSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQ-DPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSLL 977
            QI++D++CPW YIG+  + K I+      ++  F   W PYM+A G+ E G+ +  F+   +     RD D   + ++   S  G L                          R+++NS  A RL++LA EQ +  G+   QT +   +F AYF    +I+ +  L++LA   GV   G      GS   +     E      V G P+F ISR+GYPG +R  GAQ PQ F +AF SLL
Sbjct:    1 QIFSDIICPWCYIGTRLLWKAIAELSQNHRATEFRFKWRPYMIAPGVGEKGEAMRDFMQKRYGKALNRDKDLSEAALEAGVSLEGGLLS------------------------RQMWNSAAAHRLVQLAGEQQEQQGQPDLQTAMMEALFEAYFHREQNIAALACLQDLADKVGVSCEG---LSTGSVAALAATYKEPAEARGVKGVPFFCISRQGYPGSFRFSGAQFPQTFVRAFQSLL 213          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A1G9FM08_9RHOB (Predicted dithiol-disulfide isomerase, DsbA family n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1G9FM08_9RHOB)

HSP 1 Score: 89.4 bits (220), Expect = 1.270e-16
Identity = 70/241 (29.05%), Postives = 113/241 (46.89%), Query Frame = 3
Query:  264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTID--KRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEET--RVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSL 974
            +  + I++D +CPW YIG  ++ + + +     F V WHP+M+   +P  G D   +L    A+ G  P+    V  R    +                   RAAGL ID    R+  ++ +A RL+  A      G +G+QT +   +FRAYF    DIS+ EVL ++A +AG++ A   LR   SD D+      +   R + V   P FV+      G + + GAQ P+++ K  + +
Sbjct:    1 MVRLDIFSDPICPWCYIGKAHLDRALEARPDHPFEVVWHPFMLNPDMPPEGMDRREYLE---AKFGG-PEGAAEVYGRIREAA-------------------RAAGLDIDFDAIRRTPSTLDAQRLIHWA------GIEGRQTPVVAGLFRAYFNEGRDISDHEVLADVADSAGLD-AAMILRLLASDADVEEIRARDAWAREHGVRAVPTFVVG-----GRHAVPGAQPPELWLKVIDEI 206          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A1H7Y589_9RHOB (Predicted dithiol-disulfide isomerase, DsbA family n=1 Tax=Loktanella fryxellensis TaxID=245187 RepID=A0A1H7Y589_9RHOB)

HSP 1 Score: 89.4 bits (220), Expect = 1.330e-16
Identity = 68/222 (30.63%), Postives = 101/222 (45.50%), Query Frame = 3
Query:  264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTI--DKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNK--VIGAPYFVI-SREGYPG 914
            +  + I +D +CPW YIG  N+   ++      F + WHP+ +   +P  G D  S+L    A+ G   +A R+    AT+                      AAGLT+  DK  +  N+ NA RL+  A      G +G QT +  ++F AYF    DIS+ EVL +LA TAG++ A    R   SD D+      +    K  V   P F++ S+   PG
Sbjct:    1 MVKLDILSDPICPWCYIGKANLFAALAQVPDHPFTLEWHPFQLNPDMPHAGADRRSYLE---AKFGGRAEAVRAYAPVATA--------------------AEAAGLTLNLDKITRTPNTLNAHRLIHWA------GIEGNQTPMVDLLFAAYFVDGRDISDPEVLSDLADTAGLD-AALVRRLLASDADVTAIRDRDAHSRKMGVTAVPTFIVASQHAVPG 192          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A5A7PDA8_STRAF (DSBA-like thioredoxin domain containing protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PDA8_STRAF)

HSP 1 Score: 88.6 bits (218), Expect = 3.450e-16
Identity = 70/255 (27.45%), Postives = 111/255 (43.53%), Query Frame = 3
Query:  225 VIMPNDMEHSTSPLFNVQIYADMVCPWSYIGSENMLKGISSTKSA-SFHVTWHPYMMAAGIP-EGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAA--GLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDG--KQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNS 971
            VIM +    S   L  + + AD VCPW ++G +N+ K ISS+    +F + WHPYM+    P EG    + +L+ F                RA     ++      I   L L +  +   G T+D  R IY +                GK G  KQ +L   ++  YF     I + + L   AK  G+E A ++L    +  +   E +E+   + + G P++V++     G Y+L G Q P+ F KAF +
Sbjct:   12 VIMASSNNGSAKKLIQIDVSADTVCPWCFVGKKNLDKAISSSDDRYTFEINWHPYMLNPSAPKEGVVKKEFYLNKFGP--------------RAVQMEARM----TEIFKGLGLEYDTSGLTGNTLDSHRLIYFA----------------GKQGLDKQHKLVEELYLGYFTQGKYIGDRDFLVESAKKVGIEGASEFLEDPNNGVNEVNEEIEQHSAH-ISGVPHYVVN-----GKYQLSGGQPPESFLKAFQA 226          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A2D9YLI5_9RHOB (Polyketide biosynthesis protein n=1 Tax=Maritimibacter sp. TaxID=2003363 RepID=A0A2D9YLI5_9RHOB)

HSP 1 Score: 86.7 bits (213), Expect = 1.140e-15
Identity = 67/243 (27.57%), Postives = 112/243 (46.09%), Query Frame = 3
Query:  264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLS-SFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKR--RKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKA--GDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSLL 977
            +  + I +D +CPW YIG  N+ + +       F + WHP+ +   +P GG D   +L   F  ++G    A   VV+ A                        AAGLTID    ++  ++ +A RL+  A      G + +QT +   +FRAYF+   DI +++VL ++A +AG++ A     L+G     DI G      R + V G P FV+ +      + + GAQ P+++ +    L+
Sbjct:    1 MVKLDIISDPICPWCYIGKTNLDRALEKIGDHPFEIEWHPFQLNPEMPAGGMDRTEYLEHKFGGRDGA-LKAYAPVVEAA-----------------------EAAGLTIDFAAIQRTPSTLDAHRLIHWA------GLEQRQTPVVSALFRAYFQEGRDIGDVDVLADIADSAGMDAAVVRQLLQGDADRDDIRGRDAW-AREHGVTGVPTFVVGQR-----HAVPGAQPPELWVQVITELM 207          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A6N7JIS3_9PROT (DsbA family oxidoreductase n=1 Tax=Niveispirillum sp. SYP-B3756 TaxID=2662178 RepID=A0A6N7JIS3_9PROT)

HSP 1 Score: 85.5 bits (210), Expect = 2.500e-15
Identity = 68/233 (29.18%), Postives = 104/233 (44.64%), Query Frame = 3
Query:  273 VQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFL-SSF-SAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGV--EKAGDYLRGCGSDTDIFGEML--EETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVF 953
            ++IYAD+VCPW YIG   M + +      S  + W P+ +   +P GG D  ++L + F SA+  R   A   +V++A  + G                      + +D  R+I N+TNA RL+R A+      + G+ T++   ++ AYF    DI    +L   A   G+  E+   YL    S+ D+       ++ R   V   P FV  R      Y L GAQ PQ F
Sbjct:    3 IEIYADLVCPWCYIGKRRMEQALEQRPGLSVDIRWMPFQLNPELPAGGMDRATYLVAKFGSAERARQLSA---MVEQAAIKEG--------------------LPMRLDLARRIPNTTNAHRLVRFAE------RFGRSTEMITTLYEAYFAQGLDIGATSILLQQAMATGLPEEEVASYLN---SEADMAAIRTGDQQARQLGVQAVPCFVFERR-----YALSGAQEPQAF 198          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A239DRI4_9PROT (Predicted dithiol-disulfide isomerase, DsbA family n=1 Tax=Azospirillum sp. RU38E TaxID=1907313 RepID=A0A239DRI4_9PROT)

HSP 1 Score: 83.2 bits (204), Expect = 1.530e-14
Identity = 67/231 (29.00%), Postives = 103/231 (44.59%), Query Frame = 3
Query:  273 VQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFL-SSF-SAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGV--EKAGDYLRGCGSDTDIFGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVF 953
            ++IYAD+VCPW YIG   + + +      S  + W P+ +   +PE G D  ++L + F S    R   A   +V++A S+ G                      L +D  R+  N+TNA RL+R A+      + G+ T++A  +F++YF    DI    +L  LA   G+  ++   YL    +D        ++ R   V   P FV  R      Y L GAQ PQ F
Sbjct:    3 IEIYADLVCPWCYIGKRRLEQALELRPGLSVDIRWMPFQLNPELPEAGMDRATYLVAKFGSIDRARQLSA---MVEQAASKEG--------------------LPLRLDLVRRTPNTTNAHRLVRFAE------RFGRSTEMASTLFQSYFAQGLDIGATSILLELAIANGLPGDEVATYLSS-EADKAAIRAGDQQARQLGVQAVPCFVFERR-----YALSGAQEPQAF 198          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A2T6AW49_9RHOB (Putative DsbA family dithiol-disulfide isomerase n=1 Tax=Allosediminivita pacifica TaxID=1267769 RepID=A0A2T6AW49_9RHOB)

HSP 1 Score: 82.8 bits (203), Expect = 2.410e-14
Identity = 63/242 (26.03%), Postives = 115/242 (47.52%), Query Frame = 3
Query:  264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTI--DKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNKVIGA---PYFVISREGYPGVYRLVGAQGPQVFRKAFNSL 974
            +  + I++D VCPW YIG   + + + +  +  F V W P+M+   +PE G+D    L +         +A R +++ A                         AG+T+  DK  +  +S +A RL+         G +G QT +   +F+AYF    DIS+ +VL ++A ++G++ AG   R   SD D   E++E+    + +G    P F+++ +     + + GAQ P++++K  + L
Sbjct:    1 MIQLDIFSDPVCPWCYIGKGYLDQALQANPNHPFQVRWLPFMLNPEMPEAGRDRREHLEAKFGSKEAAAEAYRPILEHAEK-----------------------AGVTLNFDKIERTPSSLHAQRLIHWG------GVEGVQTAVVSALFKAYFVEGRDISDFDVLCDIADSSGLD-AGLIARLLKSDADR-DEIVEQDAAARGMGVSAVPTFIVASQ-----HAVPGAQPPELWQKVIDEL 206          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A4U7N6K1_9RHOB (DsbA family oxidoreductase n=1 Tax=Pelagicola litoralis TaxID=420403 RepID=A0A4U7N6K1_9RHOB)

HSP 1 Score: 82.0 bits (201), Expect = 4.350e-14
Identity = 65/242 (26.86%), Postives = 107/242 (44.21%), Query Frame = 3
Query:  264 LFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWHPYMMAAGIPEGGQDLDSFLSS-FSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTID--KRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEETRVNK--VIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSL 974
            +  + I +D +CPW  IG   +   +++     F V WHP+ +   +P+ G D   +L + F  +            D+A     Q+      I            GL ID    ++  N+ +A RL+  A      G +GKQ  +   +F AYFK   DI NIEVL ++A +AG++ A   ++   SD DI      +T   +  V   P F++      G + + GAQ P++++K    L
Sbjct:    1 MIKLDILSDPICPWCLIGKTQLETALAAEPDHPFTVEWHPFQLNPDMPKDGMDRRLYLETKFGGK------------DQAIKVYAQIAQHAEKI------------GLEIDFGAIKRTPNTVDAHRLIHWA------GIEGKQNDVVDALFAAYFKEGRDIGNIEVLADIADSAGLD-AAVVIKLLQSDADIDNIQKRDTHSREMGVTSVPTFIVD-----GKHAVPGAQAPELWQKVIAEL 206          
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Match: A0A8J5LMQ5_ZINOF (DSBA domain-containing protein n=5 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LMQ5_ZINOF)

HSP 1 Score: 83.2 bits (204), Expect = 6.200e-14
Identity = 73/249 (29.32%), Postives = 111/249 (44.58%), Query Frame = 3
Query:  243 MEHSTSP--LFNVQIYADMVCPWSYIGSENMLKGISSTKSA-SFHVTWHPYMMAAGIP-EGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQPNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGKQTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDIFGEMLEE--TRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNS 971
            M HST    L ++ + +D VCPW +IG +N+ K I S K   +F V WHP+ +    P EG    D +   F A          +++ R T     L F+  +  + L        G T+D  R I  S +              G D KQ  L   +F  YF     I + +VL + A+  G+E A + L       +   E LE+  +R+N   G P+FVI+ +     Y++ G Q P+VF +AF +
Sbjct:   64 MAHSTGEKKLISIDVSSDTVCPWCFIGKQNLQKAIDSAKDRFNFEVRWHPFFLNPDAPKEGINKTDFYKQKFGASQ------YEAMMSRMTKIFNSLGFE--YDTSGL-------TGSTLDSHRLITFSASQ-------------GYD-KQNALVEELFLNYFCQGKYIGDRKVLLDAAQKVGIEGASELLHDPTKGIEEVNEELEKYSSRIN---GVPHFVINEK-----YKISGGQPPEVFLRAFQA 275          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9131.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG63_9STRA1.080e-2632.08Thioredoxin-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A1G9FM08_9RHOB1.270e-1629.05Predicted dithiol-disulfide isomerase, DsbA family... [more]
A0A1H7Y589_9RHOB1.330e-1630.63Predicted dithiol-disulfide isomerase, DsbA family... [more]
A0A5A7PDA8_STRAF3.450e-1627.45DSBA-like thioredoxin domain containing protein n=... [more]
A0A2D9YLI5_9RHOB1.140e-1527.57Polyketide biosynthesis protein n=1 Tax=Maritimiba... [more]
A0A6N7JIS3_9PROT2.500e-1529.18DsbA family oxidoreductase n=1 Tax=Niveispirillum ... [more]
A0A239DRI4_9PROT1.530e-1429.00Predicted dithiol-disulfide isomerase, DsbA family... [more]
A0A2T6AW49_9RHOB2.410e-1426.03Putative DsbA family dithiol-disulfide isomerase n... [more]
A0A4U7N6K1_9RHOB4.350e-1426.86DsbA family oxidoreductase n=1 Tax=Pelagicola lito... [more]
A0A8J5LMQ5_ZINOF6.200e-1429.32DSBA domain-containing protein n=5 Tax=Zingiber of... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9131contigC-tenellus_contig9131:602..3742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LHI5
PFAMsDSBA
Model size1834
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.01e-21
EggNOG OGsCOG2761@1|root,2QTH7@2759|Eukaryota
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-21_003370.1
DescriptionDSBA-like thioredoxin domain
Cds size1602
COG categoryQ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9131.1.4prot_C-tenellus_contig9131.1.4Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9131 602..3512 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790148.7671938-CDS-C-tenellus_contig9131:601..14861680790148.7671938-CDS-C-tenellus_contig9131:601..1486Choristocarpus tenellus KU2346CDSC-tenellus_contig9131 602..1486 -
1680790148.78372-CDS-C-tenellus_contig9131:1637..18351680790148.78372-CDS-C-tenellus_contig9131:1637..1835Choristocarpus tenellus KU2346CDSC-tenellus_contig9131 1638..1835 -
1680790148.7956185-CDS-C-tenellus_contig9131:2064..23081680790148.7956185-CDS-C-tenellus_contig9131:2064..2308Choristocarpus tenellus KU2346CDSC-tenellus_contig9131 2065..2308 -
1680790148.8051593-CDS-C-tenellus_contig9131:2702..28871680790148.8051593-CDS-C-tenellus_contig9131:2702..2887Choristocarpus tenellus KU2346CDSC-tenellus_contig9131 2703..2887 -
1680790148.8163025-CDS-C-tenellus_contig9131:3139..31811680790148.8163025-CDS-C-tenellus_contig9131:3139..3181Choristocarpus tenellus KU2346CDSC-tenellus_contig9131 3140..3181 -
1680790148.8347769-CDS-C-tenellus_contig9131:3464..35121680790148.8347769-CDS-C-tenellus_contig9131:3464..3512Choristocarpus tenellus KU2346CDSC-tenellus_contig9131 3465..3512 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790148.8448153-UTR-C-tenellus_contig9131:3512..37421680790148.8448153-UTR-C-tenellus_contig9131:3512..3742Choristocarpus tenellus KU2346UTRC-tenellus_contig9131 3513..3742 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9131.1.4

>prot_C-tenellus_contig9131.1.4 ID=prot_C-tenellus_contig9131.1.4|Name=mRNA_C-tenellus_contig9131.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=534bp
MPNDMEHSTSPLFNVQIYADMVCPWSYIGSENMLKGISSTKSASFHVTWH
PYMMAAGIPEGGQDLDSFLSSFSAQNGRDPDACRSVVDRATSQSGQLCFQ
PNHIMANLWLAFCRAAGLTIDKRRKIYNSTNALRLMRLAKEQDPTGKDGK
QTQLAGVIFRAYFKHRADISNIEVLENLAKTAGVEKAGDYLRGCGSDTDI
FGEMLEETRVNKVIGAPYFVISREGYPGVYRLVGAQGPQVFRKAFNSLLI
EKSKLVAMLKAKQASKRGMPPPPPLSFRAATPVQPSARPEKRQRVLIKDE
PLPPRPSCVSLKPQLWQLHQSSSPPPHLPPHSGCMGDVARGWRTNERARQ
EMLDQATVVEGREKERQSRDAVSKQPQPFRLAREGSLVPPPAASEWASSC
PRASTLPPKSLGRGGVMGKDCCDPQDLHGFGLRQGSPGAGLTKAAVRRGV
GGTDEDMKGSREEVEKGEWYPLKGKVNWRDVGCEKEQDSTGIPDSDHQAA
QTILQLGARCSGPCKQEVEKEQEGKIKKCRPGVR
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mRNA from alignment at C-tenellus_contig9131:602..3742-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9131.1.4 ID=mRNA_C-tenellus_contig9131.1.4|Name=mRNA_C-tenellus_contig9131.1.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3141bp|location=Sequence derived from alignment at C-tenellus_contig9131:602..3742- (Choristocarpus tenellus KU2346)
ATATACCCAAACACATGATTCGCCGAAGTGCCTTATATGTACCGTTCCTA GTCCATTGTCCTAAAGCCATACCAACAGACCCCTTCATAAATGTCCATCC ATAACCTAGATTGCTAAGACGGCATCTATATATGTAACAACGACGCCGAA GATAAACGAAGCCAAGCCCAGTCTCACATCCACCTTTGGTTGAAGGGGTG TATCTCACCAGAGTGCCACATCAAGTGATAATGCCCAACGATATGGAACA TTCGACCAGTCCGTTGTTCAATGTCCAGGCAAGTTTTTTTCTGTCCGTGT ATAGATGATACTCCTTCTGCTTGACAATTTTCACGTCAGGCTTTGGTTGT TGTAGATGTTGTGATGGATACGGCTTGTAATTTTTCAACCTTATGTCCTC TCAGATCACCAATTCTGGTTACGCCCAGAGGGAGATAAGCCACCCCTCCT CCCTATCCTTCATTTTCGACGGACAGAACCAGCTCGTGGCATACATTCTC ACCAATCCCGTAATGTATTTCTTTCCCGACACTCATCTCATTGCGTTCTG AATATCTCCAGATTTACGCGGATATGGTGTGCCCTTGGAGCTACATCGGT TCGGTGAGAGTTGTGGTGATTTGTCCCATCTTTCGTTAGTGTCGTTAGTG GAGAATCATTGACCACTCAGTGAACAAAGGCAAATGTACATCGTCAGATA TTTATTGTCCTCACCCGTTGAATAGAGCCATTGATTTCGATGCGACTTGG CATCGGTAGTGAGGTGATAGTTTGGGGGGGTGACTGGCCAAGACATCACC TTTCCAAACCAACATCTACTCCCTCGTTACCCACCCCGCCTCTGCTGTGC CACAGGAAAATATGCTAAAGGGCATCTCGTCGACCAAGTCTGCTAGCTTC CACGTGACCTGGCATCCCTATATGATGGCGGCTGGTATCCCGGAAGGAGG GCAGGACCTCGACAGTTTCCTCTCCTCATTCTCAGCCCAAAATGGTCGTG ATCCGGACGCCTGCAGGTCTGTAGTGGATCGCGCAACGAGGTGAGACGTA AATGCTCTTGCGCGTAATTTATATTAATATTCCTTCTCTTTCTTTTCCCT CGGTAGTGGGTCATGCAGAGCAACATAAACTGTCAGAACACAGTGTTGCA ATCTGTCTACCCCTTTTAAACTGGTGATTGCCAGCAAAGTATAAATCCAC ACAAACCTAGAGACGTGTTTACTCATTTGTCCATGAGGCAGGATCTCGAC CCCTATCGTCTATCCCTTCGCGTGAGAAATATTACACCCCCTACTCGGAC TTTATTTTGCCTCGCGGGAAAGATAGAGCTTATATATCAATCTTTTTGGT AGGGGGAGACGAGTCAGATACCAATACTTATTTATAGTATTTCTTACCTA CTTTTCTTTATCCATCCATCAATCCATCCATCAGTCAATCTGGCCAACTG TGCTTTCAACCCAACCACATTATGGCAAATTTGTGGTTGGCGTTTTGCAG GGCTGCTGGCCTGACTATTGACAAACGCCGAAAGATCTACAACAGCACCA ACGCCCTACGCTTAATGCGATTGGCCAAGGAGCAGGACCCCACGGGCAAG GATGGGAAACAGACACAACTGGCAGGGGTTATCTTTAGGGCATACTTCAA GCACAGGGCAGATATCAGCAATATCGAGGTGTGGTGGGCAGGATGAAGGT ACCATTATTGACAGGGGTAACGCCCCCTGCCCAATTAATATTTTCTCGTG TGGAAGGCTTCACCATGTGTTGACTACATGATAGGGCGTAGTGGTACACC GAGAGGTGGTACAAACAAATTGCCCTGTTACTCTCTCTATGTGTTCCCAT CCATATATCCAGTTTCCACATCCCTCCTCAAGGTCAACTACTTGGAAACC AATGCAGGTGCTTGAGAACCTGGCAAAGACTGCGGGCGTGGAAAAAGCAG GGGATTACCTCAGAGGATGTGGCAGTGACACTGACATCTTTGGCGAAATG CTTGAAGAGACTCGCGTCAACAAGGTCATTGGTGCACCATACTTCGTGAT TTCCAGGGAGGGATATCCAGGGGTCTACCGTCTAGTGGGAGCCCAGGGCC CGCAGGTCAGGAGCACAGAATGCCAGACCACACTGATTTCCAACAGTGGG GATGAATTGTATGTAGTTCATGTGTGTGCTGAGCTGTCTAGGGGAGAATA CTTGGATAAACACCCCAACCCAAACGCTAACTGGTTATGCTTTTTCCAAA ACACAGGTTTTCAGGAAGGCATTCAATTCCCTGCTCATCGAGAAGAGCAA GCTCGTCGCAATGCTTAAGGCCAAGCAGGCCTCCAAGAGAGGAATGCCTC CTCCCCCTCCTCTGTCTTTCAGGGCAGCAACCCCAGTTCAGCCCTCAGCC CGTCCTGAGAAGAGACAACGCGTGCTTATCAAGGATGAGCCTCTTCCTCC ACGACCATCATGCGTATCATTAAAGCCACAGCTATGGCAGCTTCATCAGT CATCGTCTCCCCCTCCGCACTTGCCACCCCACTCAGGCTGTATGGGTGAT GTGGCCAGGGGCTGGAGGACCAACGAGAGGGCAAGGCAAGAGATGTTAGA CCAGGCCACAGTGGTAGAAGGGAGGGAGAAAGAGAGGCAAAGTAGGGACG CTGTAAGTAAGCAGCCCCAGCCGTTTAGGCTCGCCCGTGAAGGCAGTCTG GTTCCACCCCCAGCTGCATCAGAGTGGGCTTCGAGCTGCCCTCGGGCTTC AACGTTGCCCCCAAAGTCATTGGGCAGAGGAGGCGTTATGGGCAAGGACT GCTGCGATCCACAAGACCTACATGGCTTTGGGTTGAGACAAGGCAGCCCA GGGGCAGGGTTGACAAAGGCAGCAGTTCGGCGTGGGGTGGGTGGTACTGA TGAGGATATGAAAGGCAGCAGAGAGGAAGTTGAAAAGGGAGAGTGGTATC CGTTGAAGGGGAAGGTCAACTGGCGAGATGTAGGGTGTGAGAAGGAGCAA GATAGCACAGGGATACCCGACAGTGATCATCAGGCTGCTCAGACAATACT GCAGCTTGGAGCGCGGTGCTCGGGCCCATGTAAGCAGGAGGTGGAAAAAG AACAGGAAGGCAAAATAAAAAAATGCAGGCCTGGTGTGCGC
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Coding sequence (CDS) from alignment at C-tenellus_contig9131:602..3742-

>mRNA_C-tenellus_contig9131.1.4 ID=mRNA_C-tenellus_contig9131.1.4|Name=mRNA_C-tenellus_contig9131.1.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1602bp|location=Sequence derived from alignment at C-tenellus_contig9131:602..3742- (Choristocarpus tenellus KU2346)
ATGCCCAACGATATGGAACATTCGACCAGTCCGTTGTTCAATGTCCAGAT
TTACGCGGATATGGTGTGCCCTTGGAGCTACATCGGTTCGGAAAATATGC
TAAAGGGCATCTCGTCGACCAAGTCTGCTAGCTTCCACGTGACCTGGCAT
CCCTATATGATGGCGGCTGGTATCCCGGAAGGAGGGCAGGACCTCGACAG
TTTCCTCTCCTCATTCTCAGCCCAAAATGGTCGTGATCCGGACGCCTGCA
GGTCTGTAGTGGATCGCGCAACGAGTCAATCTGGCCAACTGTGCTTTCAA
CCCAACCACATTATGGCAAATTTGTGGTTGGCGTTTTGCAGGGCTGCTGG
CCTGACTATTGACAAACGCCGAAAGATCTACAACAGCACCAACGCCCTAC
GCTTAATGCGATTGGCCAAGGAGCAGGACCCCACGGGCAAGGATGGGAAA
CAGACACAACTGGCAGGGGTTATCTTTAGGGCATACTTCAAGCACAGGGC
AGATATCAGCAATATCGAGGTGCTTGAGAACCTGGCAAAGACTGCGGGCG
TGGAAAAAGCAGGGGATTACCTCAGAGGATGTGGCAGTGACACTGACATC
TTTGGCGAAATGCTTGAAGAGACTCGCGTCAACAAGGTCATTGGTGCACC
ATACTTCGTGATTTCCAGGGAGGGATATCCAGGGGTCTACCGTCTAGTGG
GAGCCCAGGGCCCGCAGGTTTTCAGGAAGGCATTCAATTCCCTGCTCATC
GAGAAGAGCAAGCTCGTCGCAATGCTTAAGGCCAAGCAGGCCTCCAAGAG
AGGAATGCCTCCTCCCCCTCCTCTGTCTTTCAGGGCAGCAACCCCAGTTC
AGCCCTCAGCCCGTCCTGAGAAGAGACAACGCGTGCTTATCAAGGATGAG
CCTCTTCCTCCACGACCATCATGCGTATCATTAAAGCCACAGCTATGGCA
GCTTCATCAGTCATCGTCTCCCCCTCCGCACTTGCCACCCCACTCAGGCT
GTATGGGTGATGTGGCCAGGGGCTGGAGGACCAACGAGAGGGCAAGGCAA
GAGATGTTAGACCAGGCCACAGTGGTAGAAGGGAGGGAGAAAGAGAGGCA
AAGTAGGGACGCTGTAAGTAAGCAGCCCCAGCCGTTTAGGCTCGCCCGTG
AAGGCAGTCTGGTTCCACCCCCAGCTGCATCAGAGTGGGCTTCGAGCTGC
CCTCGGGCTTCAACGTTGCCCCCAAAGTCATTGGGCAGAGGAGGCGTTAT
GGGCAAGGACTGCTGCGATCCACAAGACCTACATGGCTTTGGGTTGAGAC
AAGGCAGCCCAGGGGCAGGGTTGACAAAGGCAGCAGTTCGGCGTGGGGTG
GGTGGTACTGATGAGGATATGAAAGGCAGCAGAGAGGAAGTTGAAAAGGG
AGAGTGGTATCCGTTGAAGGGGAAGGTCAACTGGCGAGATGTAGGGTGTG
AGAAGGAGCAAGATAGCACAGGGATACCCGACAGTGATCATCAGGCTGCT
CAGACAATACTGCAGCTTGGAGCGCGGTGCTCGGGCCCATGTAAGCAGGA
GGTGGAAAAAGAACAGGAAGGCAAAATAAAAAAATGCAGGCCTGGTGTGC
GC
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