prot_C-tenellus_contig8645.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8645.5.1
Unique Nameprot_C-tenellus_contig8645.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length79
Homology
BLAST of mRNA_C-tenellus_contig8645.5.1 vs. uniprot
Match: A0A6H5JJT4_9PHAE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT4_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.020e-6
Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   11 VQITAIYTDYLKAFPKEITQVDNQLVLYTGSMLVGLPYSTTTQSTSVHLGSKEV 64
            V++ A+YTD L AFPKEITQ++ Q V++  ++L   PY T  Q+T++ L S ++
Sbjct:  128 VRVKAVYTDVLTAFPKEITQLEEQSVVFASTLLAPSPYKTVKQTTTLKLASPKI 181          
BLAST of mRNA_C-tenellus_contig8645.5.1 vs. uniprot
Match: A0A3M6VLJ8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLJ8_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.460e-6
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   11 VQITAIYTDYLKAFPKEITQVDNQLVLYTGSMLVGLPYSTTTQSTSVHLGSKEV 64
            V++TA +T  LK +P EITQVD+QLVL+  S LV  PY T TQ+T + L S  V
Sbjct:  117 VKVTAYFTRVLKPYPAEITQVDDQLVLFNTSHLVISPYLTKTQTTKLKLPSNSV 170          
BLAST of mRNA_C-tenellus_contig8645.5.1 vs. uniprot
Match: D7FKM8_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKM8_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 2.730e-6
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   11 VQITAIYTDYLKAFPKEITQVDNQLVLYTGSMLVGLPYSTTTQSTSVHLGSKEV 64
            + + A+YTD L AFPKEITQ++ Q V++  ++L   PY T  Q+T++ L S ++
Sbjct:  119 IAVKAVYTDVLTAFPKEITQLEEQSVVFASTLLAPSPYKTVKQTTTLKLASPKI 172          
BLAST of mRNA_C-tenellus_contig8645.5.1 vs. uniprot
Match: M4B1W3_HYAAE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1W3_HYAAE)

HSP 1 Score: 49.7 bits (117), Expect = 4.550e-5
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   11 VQITAIYTDYLKAFPKEITQVDNQLVLYTGSMLVGLPYSTTTQSTSVHLGSKEV 64
            V++TA +T  L  +P EITQ ++QLVL+  S LV  PY T TQ+T + L S +V
Sbjct:  115 VKVTAYFTRVLTPYPAEITQQEDQLVLFEASYLVSSPYLTKTQTTKLKLPSGKV 168          
BLAST of mRNA_C-tenellus_contig8645.5.1 vs. uniprot
Match: U5D4I6_AMBTC (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5D4I6_AMBTC)

HSP 1 Score: 49.7 bits (117), Expect = 4.630e-5
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   11 VQITAIYTDYLKAFPKEITQVDNQLVLYTGSMLVGLPYSTTTQSTSVHLGSKEV 64
            +++ ++YT  LK FP+EITQ DNQLVLY  S     PY    QS S+ + S  V
Sbjct:  125 LEVFSVYTHSLKPFPEEITQADNQLVLYQDSAYYLSPYDVKVQSLSIRVPSPRV 178          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8645.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JJT4_9PHAE1.020e-644.44Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A3M6VLJ8_9STRA1.460e-653.70Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
D7FKM8_ECTSI2.730e-642.59Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
M4B1W3_HYAAE4.550e-548.15Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
U5D4I6_AMBTC4.630e-546.30Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007676Ribophorin IPFAMPF04597Ribophorin_Icoord: 11..65
e-value: 4.6E-11
score: 42.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8645contigC-tenellus_contig8645:5506..5742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8645.5.1mRNA_C-tenellus_contig8645.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8645 5189..6181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8645.5.1 ID=prot_C-tenellus_contig8645.5.1|Name=mRNA_C-tenellus_contig8645.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=79bp
MHDAFFFIQFVQITAIYTDYLKAFPKEITQVDNQLVLYTGSMLVGLPYST
TTQSTSVHLGSKEVRPSFLLGTCTSFLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007676Ribophorin_I