prot_C-tenellus_contig8593.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8593.4.1
Unique Nameprot_C-tenellus_contig8593.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length194
Homology
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.770e-24
Identity = 59/193 (30.57%), Postives = 103/193 (53.37%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +V+A +   G+S ++Y+D+  +  ++I    I     L  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAMKVITEGG 336          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.470e-23
Identity = 56/193 (29.02%), Postives = 101/193 (52.33%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  + G QQGD +GP L+C +    + +++A +   G+  ++Y+D+  +  ++I    I     L  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:  229 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAMKVITEGG 419          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.960e-23
Identity = 57/193 (29.53%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A +   G+  ++Y+D+  +  ++I    I     L  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAMKVITEGG 697          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 6.780e-23
Identity = 56/193 (29.02%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A +   G+  ++Y+D+  +  ++I    I     +  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAMKVITEGG 244          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 9.460e-23
Identity = 57/193 (29.53%), Postives = 101/193 (52.33%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A +   G+  ++Y+D+  +  +DI    I     L  +L  VGI +N  K+ A  P GH   P+E   L  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:  506 VVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAMKVITEGG 696          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 9.490e-23
Identity = 57/193 (29.53%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A +   G+S ++Y+D+  +  ++I    I     L  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+ TD +++    +VI   G
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIETDAYVEDIAMKVITEGG 723          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 3.320e-22
Identity = 56/193 (29.02%), Postives = 101/193 (52.33%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A +   G+  ++Y+D+  +  ++I    I     L  +L  VGI +N  K+ A  P G    P+E  LL  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:  528 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAIKVIAEGG 718          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 7.840e-22
Identity = 57/194 (29.38%), Postives = 102/194 (52.58%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTL-ISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSG 192
            V+  D  NAFN+ + +A +    +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C      + +++A +   G+  ++Y+D+ + +  ++I    I     L  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+GTD +++    +VI   G
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVEDIAMKVITEGG 329          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.690e-21
Identity = 52/182 (28.57%), Postives = 97/182 (53.30%), Query Frame = 0
Query:    1 VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQ 181
            V+  D  +AFN+ + +  +    +++P +L YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A++   G+  ++Y+D+  +   +I    I     L  +L  VGI +N  K+ A  P GH   P+E  LL  AG+ +A    G   +G P+GTD +++
Sbjct:  131 VVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEE--GITVVGVPIGTDAYVE 310          
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Match: A0A6H5JHZ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 5.040e-17
Identity = 46/159 (28.93%), Postives = 85/159 (53.46%), Query Frame = 0
Query:   24 ETIPGLLPYISKVYGNT-RNLLFPLDEGGTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDNTLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSELELLPAAGINLAPNPSGFVTLGAPVGTDGFIQ 181
            +++P L+ YI++ Y       ++ +D G  + +  +SG QQGD +GP L+C +    + +++A +   G+  ++Y+D+  +  ++I    I     L  +L  VGI +N  K+ A  P GH   P+   LL  AG+ +A    G   +G P+GTD +++
Sbjct:    6 KSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAGRRLLGDAGLPIAEE--GITVVGVPIGTDVYVE 162          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8593.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLG6_9PHAE1.770e-2430.57Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE1.470e-2329.02Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KMQ2_9PHAE2.960e-2329.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE6.780e-2329.02Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE9.460e-2329.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE9.490e-2329.53Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE3.320e-2229.02Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE7.840e-2229.38Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K0V7_9PHAE3.690e-2128.57Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JHZ7_9PHAE5.040e-1728.93Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 1..138
e-value: 3.2E-14
score: 53.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..160
score: 13.959

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8593contigC-tenellus_contig8593:4685..5266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8593.4.1mRNA_C-tenellus_contig8593.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8593 4685..5266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8593.4.1 ID=prot_C-tenellus_contig8593.4.1|Name=mRNA_C-tenellus_contig8593.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=194bp
VITLDGRNAFNSIRCSAFIQNLPETIPGLLPYISKVYGNTRNLLFPLDEG
GTKILPSRSGAQQGDPLGPLLYCMVTHRALQQVQAVFGPQGISSRSYLDN
TLISARDIGPNTIAAFEQLKTDLHEVGIDLNMDKTFAASPQGHQPIPSEL
ELLPAAGINLAPNPSGFVTLGAPVGTDGFIQAHMAEVIENSGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom