mRNA_C-tenellus_contig8481.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: A0A6H5L5M1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M1_9PHAE) HSP 1 Score: 276 bits (707), Expect = 4.650e-88 Identity = 148/272 (54.41%), Postives = 183/272 (67.28%), Query Frame = 3 Query: 249 PSVPFLAWVERTVKERAEGDT---FGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHCLASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEA---FCKGRTEDLPQRFVGFSWLPQYHDLG 1046 PSV L W E TV+ R+ G+ F WFD +G+V ++ TFA +WAEAGRIAHELR S GL KGDR +LCYGFGL FFAAFLGCLRAGV+AVP+YPPSP TLSKSL K+Q V++C P++IL+S DVN LRLAS+LN +S AR+LWP +PY S+ V S G K + G S +DE++L D+AFLQFTSGST++PKGVM+TFGNL HN + + K+ ++ GR E R GFSWLPQYHDLG Sbjct: 11 PSVELLRWAEATVRGRSGGENEVVFARWFDAQGEVSQTHTFASVWAEAGRIAHELRVSWGLGKGDRAILCYGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTLSKSLTKLQSIVEACDPKVILVSGDVNRLRLASKLNFVSSARRLWPDLPYKVARSSGVSSGGGIS-------KWLGGAGGGGES-------FDEESLGEGDVAFLQFTSGSTSEPKGVMVTFGNLEHNARFISRMSEKSFKSRGFSFSGREEVGGVR--GFSWLPQYHDLG 266
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: A0A6H5KNL6_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL6_9PHAE) HSP 1 Score: 230 bits (587), Expect = 5.510e-70 Identity = 122/267 (45.69%), Postives = 164/267 (61.42%), Query Frame = 3 Query: 249 PSVPFLAWVERTVKERAEGDTFGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHC-LASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFCKGRTEDLPQRFVGFSWLPQYHDLG 1046 PS + + + E F W+ DKG V +RTF G+WA +G IA+ LR + GL KGDRVVL + FGL FF FLGCLRAGVVAVP+YPP+P TL KSL K+ + V+SC+P++I L VN LRLAS++ ++ WP +PYHC + + PS S+ ++++G S + ++D+ ++ A D+AFLQFTSGST+DPKGVMITFGNL HN+ VL + ME +G R FSWLP HD+G Sbjct: 7 PSGILIRKIHGVIAEMPRDKVFARWYGDKGHVESTRTFHGIWAASGEIAYLLRSTLGLNKGDRVVLAFNFGLRFFVVFLGCLRAGVVAVPVYPPNPATLQKSLGKLSLIVESCEPKMIFLCPLVNKLRLASKVRAVATGNSGWPDLPYHCPMVKEETPSKANTSS--SSSFRLLMGGGRTSNADE-RRKSFDDPSIKAADVAFLQFTSGSTSDPKGVMITFGNLDHNISSVLLSSN--MEIAARGGPPPQDGR-AWFSWLPTSHDMG 267
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI) HSP 1 Score: 240 bits (613), Expect = 1.510e-67 Identity = 121/270 (44.81%), Postives = 169/270 (62.59%), Query Frame = 3 Query: 237 METGPSVPFLAWVERTVKERAEGDTFGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHCLASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFCKGRTEDLPQRFVGFSWLPQYHDLG 1046 + T S FL + R++ + E FG W++ KG V +RTF G+W +G IAH LR GL KGDRVVL + FGL FFA FLGCLRAG++AVP+YPP+P TL +SL K+Q+ VDSC P+++L+ VN LRLAS+L ++ + WP +PYHC DV G + SA S ++D+ T+ +D+AFLQFTSGST+DPKGVM+T+GNL HN+ +++ N+ + +G D + + FSWLP +HD+G Sbjct: 443 VSTRSSGTFLQAIARSINKIPEDQVFGRWYNSKGQVESTRTFHGVWVASGEIAHLLRVEWGLSKGDRVVLAFDFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKRSLKKLQLIVDSCAPKMVLVCPLVNKLRLASKLRAVATGKSGWPDLPYHC---PDVKEENIPTGGMSSATVGWRSGGGKSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTHNIGVIV--NSSNAQIAERGGVADGQRTW--FSWLPTFHDMG 705
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: D7FH91_ECTSI (AMP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH91_ECTSI) HSP 1 Score: 228 bits (582), Expect = 2.130e-66 Identity = 124/285 (43.51%), Postives = 176/285 (61.75%), Query Frame = 3 Query: 225 ASSSMETGPSVPFLAWVERTVKERAEGDTFGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHC--LASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATN---------TYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFCKGRTEDLPQRFVGFSWLPQYHDLG 1046 A SS +T FL + ++V + E F W++ KG V +RTF G+W +G IAH LR GL KGDRVVL + FGL FFA FLGCLRAG++AVP+YPP+P TL KSL +Q+ V+ C P++IL+ VN LRLA +L V++ + WP +PYHC + +P++G L ++A V ++ S ST T ++D+ T+ ED+AFLQFTSGST+DPKGVM+T+GNL HN+ ++ N+ + +G + + FSWLP +HD+G Sbjct: 20 ARSSQDT-----FLQAIAQSVAKTPEDRVFARWYNRKGQVESTRTFHGVWGASGEIAHLLRVEWGLTKGDRVVLAFNFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKKSLQNLQLIVEGCTPKMILVCPLVNKLRLAWKLRVVATGKSGWPNLPYHCPDVKEETIPTSG----LAYTA---VEWKSRGSKSTDAGTKRPSFQMQRPSFDDPTIKPEDVAFLQFTSGSTSDPKGVMLTYGNLTHNIDAII--NSSNAQIVERGGVPGGNRTW--FSWLPTFHDMG 288
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: A0A6H5JSY1_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY1_9PHAE) HSP 1 Score: 222 bits (566), Expect = 2.620e-61 Identity = 123/285 (43.16%), Postives = 172/285 (60.35%), Query Frame = 3 Query: 225 ASSSMETGPSVPFLAWVERTVKERAEGDTFGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHC--LASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATN---------TYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFCKGRTEDLPQRFVGFSWLPQYHDLG 1046 A SS +T FL + +V + E F W++ G V +RTF G+W +G IAH LR GL KGDRVVL + FGL FFA FLGCLRAG++AVP+YPP+P TL KSL K+Q+ V+ C P +IL+ VN LRLA +L ++ + WP +PYHC + +P++G L +SA V ++ S S T ++D+ T+ ED+AFLQFTSGST+DPKGVM+T+GNL HN+ ++ N+ + +G + + FSWLP +HD+G Sbjct: 18 ARSSQDT-----FLQAIALSVAKTPEDRVFARWYNRVGQVESTRTFHGVWGASGEIAHLLRVEWGLTKGDRVVLAFNFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKKSLQKLQLIVEGCTPNMILVCPLVNKLRLAWKLRAVATGKIGWPNLPYHCPDVKEETIPTSG----LSYSA---VEWKSRGSKSAEAGTKRPSFQMQRPSFDDPTIKPEDVAFLQFTSGSTSDPKGVMLTYGNLTHNIDAII--NSSNAQIVERGGVPGGNRTW--FSWLPAFHDMG 286
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: D7G4W3_ECTSI (Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W3_ECTSI) HSP 1 Score: 218 bits (555), Expect = 7.830e-60 Identity = 113/242 (46.69%), Postives = 155/242 (64.05%), Query Frame = 3 Query: 330 DKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHC---LASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFCKGRTEDLPQRFVGFSWLPQYHDLG 1046 +KG V +RTF G+WA +G IAH LR GL KGDRVVL + FGL FFA FLGCLRAG++AVP+YPP+P TL KSL K+Q+ VDSC P++IL+ VN LRL+S+L ++ WP + YHC + + + G RGG + +M PS +D+ T+ D+AFLQFTSGST+DPKGVM+T+GNL HN+ ++ N+ + +G + + + FSWLP +HD+G Sbjct: 12 NKGQVESTRTFHGVWAASGEIAHLLRVEWGLSKGDRVVLAFNFGLGFFAVFLGCLRAGILAVPVYPPNPATLKKSLQKLQLIVDSCTPKMILVCPLVNKLRLSSKLRAVATGNSDWPKLRYHCCPDVKGETIAAAGWRGG---GSKQMGPETKRPS---------FDDPTIKPGDVAFLQFTSGSTSDPKGVMLTYGNLTHNIACII--NSSDAQIAARGGPAEGNRTW--FSWLPTFHDMG 237
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: D7G7J4_ECTSI (Carrier domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J4_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.420e-57 Identity = 99/151 (65.56%), Postives = 119/151 (78.81%), Query Frame = 3 Query: 249 PSVPFLAWVERTVKERAEGDT---FGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPY 692 PSV L W E TV+ R+ G+ F WFD +G+V E+ TFA +WAEAGRIAHELR S GL KGDR +LCYGFGL FFAAFLGCLRAGV+AVP+YPPSP TLSKSL K+Q V++C P++IL+S DVN LRLAS+LN +S AR+LWP +PY Sbjct: 2 PSVELLRWAEATVRGRSGGENDAVFARWFDAQGEVSETHTFASVWAEAGRIAHELRVSWGLGKGDRAILCYGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTLSKSLTKLQGIVEACDPKVILISGDVNHLRLASKLNFVSSARRLWPDLPY 152
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: A0A6H5J7K1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K1_9PHAE) HSP 1 Score: 197 bits (500), Expect = 6.750e-54 Identity = 104/220 (47.27%), Postives = 140/220 (63.64%), Query Frame = 3 Query: 390 IAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHCLASADVPSTG-ARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFCKGRTEDLPQRFVGFSWLPQYHDLG 1046 IAH LR GL KGDRVVL + FGL FFA FLGCLRAG++AVP+YPP+P TL KSL K+Q+ VD C P++ L+ VN LRLAS+L ++ + WP + YHC DV A GG+ S G S ++D+ T+ +D+AFLQFTSGST+DPKGVM+T+GNL HN+ +++ N+ + +G D + + FSWLP +HD+G Sbjct: 26 IAHLLRVEWGLSKGDRVVLAFDFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKKSLKKLQLIVDDCAPKMALVCPLVNKLRLASKLRAVATGKSGWPDLTYHC---PDVKEEKIATGGMSSSGVGWRSG-GGRSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTHNIGVIV--NSSNAQIAARGEVADGQRTW--FSWLPTFHDMG 237
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: A0A4D9CX67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX67_9STRA) HSP 1 Score: 192 bits (489), Expect = 5.720e-51 Identity = 115/266 (43.23%), Postives = 155/266 (58.27%), Query Frame = 3 Query: 252 SVPFLAWVERTVKERAEGDTFGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHCLASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFC-KGRTEDLPQRFVGFSWLPQYHDLG 1046 SV L+ + +E+ G F W DK + ++ ++ +W +G IA+ L G++KG+RV+LCYGFGL FF AFL CLR GVVAVP+YPP+PT L SL K+++ V S L L + +N R AS+LNVLS A+ WP GL + + +L ST T+ DE L DIAFLQ+TSGST DPKGVMITFGNL HNV+ ++ + + + FC + RT + + VG SWLPQYHD+G Sbjct: 35 SVRLLSHAKSMAEEKG-GQIFSTWIGDKNETIDF-SYEYIWDRSGAIAYHLNTKYGIKKGERVILCYGFGLEFFVAFLACLRLGVVAVPVYPPNPTKLKMSLEKLELIVTSAGATLCLTDNTINWFRKASQLNVLSSAK--WPK------------------GLKWDSTDSILA----STGTSC-----DEPGLHPNDIAFLQYTSGSTGDPKGVMITFGNLDHNVNDLILFSLRR-DIFCNRTRTLENIEVPVGVSWLPQYHDMG 268
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Match: W7U9U8_9STRA (Polyketide synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9U8_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.050e-49 Identity = 110/249 (44.18%), Postives = 146/249 (58.63%), Query Frame = 3 Query: 303 GDTFGEWFDDKGDVVESRTFAGLWAEAGRIAHELRFSRGLEKGDRVVLCYGFGLSFFAAFLGCLRAGVVAVPIYPPSPTTLSKSLHKMQMTVDSCKPRLILLSSDVNALRLASRLNVLSEARKLWPLVPYHCLASADVPSTGARGGLLFSAAKMVLGENDPSTSTAVATNTYDEQTLVAEDIAFLQFTSGSTADPKGVMITFGNLMHNVHLVLTGNTKTMEAFC-KGRTEDLPQRFVGFSWLPQYHDLG 1046 G F W DK + ++ ++ +W +G IA+ L G++KG+RV+LCYGFGL FF AFL CLR GVVAVP+YPP+PT L SL K+++ V S L L + +N R AS+LNVLS A+ WP GL + + +L T T+ DE L DIAFLQ+TSGST DPKGVMITFGNL HNV+ ++ + + + FC + RT + + VG SWLPQYHD+G Sbjct: 7 GQIFSTWIGDKNETIDF-SYEYIWDRSGAIAYYLNTKYGIKKGERVILCYGFGLEFFVAFLACLRLGVVAVPVYPPNPTKLKMSLEKLELIVTSAGATLCLTDNTINWFRKASQLNVLSSAK--WPK------------------GLKWDSTDSILA----GTGTSC-----DEPGLHPNDIAFLQYTSGSTGDPKGVMITFGNLDHNVNDLILFSLRR-DIFCNRTRTLENIEVPVGVSWLPQYHDMG 224 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8481.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig8481.1.1 >prot_C-tenellus_contig8481.1.1 ID=prot_C-tenellus_contig8481.1.1|Name=mRNA_C-tenellus_contig8481.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=281bp MTELNMASSSMETGPSVPFLAWVERTVKERAEGDTFGEWFDDKGDVVESRback to top mRNA from alignment at C-tenellus_contig8481:3868..5525+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig8481.1.1 ID=mRNA_C-tenellus_contig8481.1.1|Name=mRNA_C-tenellus_contig8481.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1658bp|location=Sequence derived from alignment at C-tenellus_contig8481:3868..5525+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig8481:3868..5525+ >mRNA_C-tenellus_contig8481.1.1 ID=mRNA_C-tenellus_contig8481.1.1|Name=mRNA_C-tenellus_contig8481.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=843bp|location=Sequence derived from alignment at C-tenellus_contig8481:3868..5525+ (Choristocarpus tenellus KU2346)back to top |