prot_C-tenellus_contig8420.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig8420.1.1
Unique Name	prot_C-tenellus_contig8420.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	429

Homology

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BLAST of mRNA_C-tenellus_contig8420.1.1 vs. uniprot
Match: A0A6H5KKD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 9.110e-6
Identity = 97/304 (31.91%), Postives = 122/304 (40.13%), Query Frame = 0

Query:  129 GKSEGMRRDWEGESLYAVSSGKGPEVVSTEDSLKASERSEDSLSAWRAGPALAIGVGGSPASLVPSTIASEEGAVEGTKRSVSMAWDMGAAGGLRMAGLER---DDSLSSIGGVGEEKLGSPRG----------ELAEVFQRKASAFIKRSRAREEANRRKREDRRLAREKVVGDEEKETSPLVGELELRGGNEEHSAERLGDSADSQEQHRVQRAWGP-ERVVGGSPMASSSRSSRWAGRGIEGENGP----RRVSVKEARMRTNRLYNNLPEVKEARERKEKEKERIRRLLSAREQEKLRSR 414
            G++ G R   EG  +      +G +   TEDSLK SE S DSL+  R GP              P     E GA    + + + AW++G+A  +R    ER   D      GG      G              ELA  F+ +AS FI RSRAREEA           R+                                   D   Q  V    GP  R+ GG  +A           G+ GE+G     RRVS++EAR RT RLYN+LPEV+EA        ER+RRLL AR  EK R R
Sbjct: 1846 GEAAGPRHGHEGGGIR-----QGEDTALTEDSLKFSEPSLDSLAMAREGP--------------PGR---EPGAHAAARPAGAAAWEIGSAEVVRDETQERPAPDHRGCDAGGPSGRSEGXXXXXXXXXXXXXXELAAFFRSRASGFIARSRAREEA----------VRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRDQPHQTGV----GPGARMRGGVDVAGPPS-------GLLGESGGXXXRRRVSIQEARKRTARLYNSLPEVREAXXXXXXXXERVRRLLEARALEKSRHR 2106

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig8420.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig8420.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KKD4_9PHAE	9.110e-6	31.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 382..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig8420	contig	C-tenellus_contig8420:3683..6114 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig8420.1.1	mRNA_C-tenellus_contig8420.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig8420 3057..6239 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig8420.1.1 ID=prot_C-tenellus_contig8420.1.1|Name=mRNA_C-tenellus_contig8420.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=429bp
MSGFSEWEEMKENDSGERKEERDDEVRGPHPLDSKKYDRERASEVSGVEG
DWERGENEGCSGGNKLDMVLAQQRSPNRDRDDDVSGDVIVNELGLWSGSD
SMLSGSQSLLSASVLEVMRGQGGGQGEEGKSEGMRRDWEGESLYAVSSGK
GPEVVSTEDSLKASERSEDSLSAWRAGPALAIGVGGSPASLVPSTIASEE
GAVEGTKRSVSMAWDMGAAGGLRMAGLERDDSLSSIGGVGEEKLGSPRGE
LAEVFQRKASAFIKRSRAREEANRRKREDRRLAREKVVGDEEKETSPLVG
ELELRGGNEEHSAERLGDSADSQEQHRVQRAWGPERVVGGSPMASSSRSS
RWAGRGIEGENGPRRVSVKEARMRTNRLYNNLPEVKEARERKEKEKERIR
RLLSAREQEKLRSRRGGGRRGSGRREVG*