prot_C-tenellus_contig8398.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8398.4.1
Unique Nameprot_C-tenellus_contig8398.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length47
Homology
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: D7FMH7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.490e-14
Identity = 31/42 (73.81%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    5 CLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHR 46
            C +VL+L+LYPLSW+HVYIP+LPE+L+GVL AP+PFL+GVHR
Sbjct:  242 CAEVLSLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHR 283          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: A0A6H5JMA5_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA5_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.130e-13
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    8 VLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHR 46
            VL L+LYPLSW+HVYIP+LPE+L+GVL AP+PFL+GVHR
Sbjct:  443 VLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHR 481          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: A0A835ZGT0_9STRA (UDENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.440e-12
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    7 QVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVH 45
            +VL  LLYPL W HVYIP+LPE LMGVLGAP+PF+VGVH
Sbjct:  293 EVLTTLLYPLCWTHVYIPVLPEPLMGVLGAPMPFIVGVH 331          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: A0A7S1SQR6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQR6_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 2.680e-11
Identity = 25/41 (60.98%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    7 QVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHRR 47
            ++L LLLYPL WAHVYIP++P +L+G + AP+PFL+G+H R
Sbjct:    7 EILRLLLYPLQWAHVYIPVVPYTLVGAVEAPMPFLMGLHSR 47          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: S4RUT0_PETMA (UDENN domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RUT0_PETMA)

HSP 1 Score: 61.6 bits (148), Expect = 3.730e-10
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    5 CLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVH 45
            C+  LALLLYP+SW HVYIP+LP  L+    AP+PFL+GVH
Sbjct:  187 CIHALALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 227          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: S4RUS8_PETMA (UDENN domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RUS8_PETMA)

HSP 1 Score: 61.6 bits (148), Expect = 4.340e-10
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    5 CLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVH 45
            C+  LALLLYP+SW HVYIP+LP  L+    AP+PFL+GVH
Sbjct:  203 CIHALALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 243          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: UPI0014042311 (DENN domain-containing protein 1B-like isoform X1 n=4 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014042311)

HSP 1 Score: 61.6 bits (148), Expect = 7.470e-10
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    5 CLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVH 45
            C+  LALLLYP+SW HVYIP+LP  L+    AP+PFL+GVH
Sbjct:  213 CIHALALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 253          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: A0A1D1VB75_RAMVA (Uncharacterized protein n=2 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VB75_RAMVA)

HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9
Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    7 QVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHRR 47
            + LA LL+P +W HVY+PILPES++  L AP+PF++G+HRR
Sbjct:  314 ECLATLLFPFAWQHVYVPILPESMVSFLDAPVPFIMGLHRR 354          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: F1N1V1_BOVIN (DENN domain containing 2D n=51 Tax=Pecora TaxID=35500 RepID=F1N1V1_BOVIN)

HSP 1 Score: 59.3 bits (142), Expect = 4.870e-9
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    5 CLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHRR 47
            C+   A LLYP SWAH YIP++PESL+G +  P PF+VGV  R
Sbjct:  277 CIHATAALLYPFSWAHTYIPVVPESLLGTVCCPTPFMVGVQMR 319          
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Match: A0A836APF9_SHEEP (UDENN domain-containing protein n=2 Tax=Ovis aries TaxID=9940 RepID=A0A836APF9_SHEEP)

HSP 1 Score: 59.3 bits (142), Expect = 4.870e-9
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    5 CLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHRR 47
            C+   A LLYP SWAH YIP++PESL+G +  P PF+VGV  R
Sbjct:  277 CIHATAALLYPFSWAHTYIPVVPESLLGTVCCPTPFMVGVQMR 319          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8398.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMH7_ECTSI2.490e-1473.81UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JMA5_9PHAE4.130e-1376.92UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZGT0_9STRA1.440e-1276.92UDENN domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S1SQR6_9CHLO2.680e-1160.98Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
S4RUT0_PETMA3.730e-1063.41UDENN domain-containing protein n=1 Tax=Petromyzon... [more]
S4RUS8_PETMA4.340e-1063.41UDENN domain-containing protein n=1 Tax=Petromyzon... [more]
UPI00140423117.470e-1063.41DENN domain-containing protein 1B-like isoform X1 ... [more]
A0A1D1VB75_RAMVA2.610e-958.54Uncharacterized protein n=2 Tax=Ramazzottius varie... [more]
F1N1V1_BOVIN4.870e-958.14DENN domain containing 2D n=51 Tax=Pecora TaxID=35... [more]
A0A836APF9_SHEEP4.870e-958.14UDENN domain-containing protein n=2 Tax=Ovis aries... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001194cDENN domainPFAMPF02141DENNcoord: 4..47
e-value: 3.4E-16
score: 59.7
IPR043153DENN domain, C-terminal lobeGENE3D3.40.50.11500coord: 1..47
e-value: 5.3E-15
score: 57.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
IPR037516Tripartite DENN domainPROSITEPS50211DENNcoord: 1..47
score: 15.062

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8398contigC-tenellus_contig8398:4937..5077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8398.4.1mRNA_C-tenellus_contig8398.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8398 4937..5077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8398.4.1 ID=prot_C-tenellus_contig8398.4.1|Name=mRNA_C-tenellus_contig8398.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=47bp
LCCLCLQVLALLLYPLSWAHVYIPILPESLMGVLGAPLPFLVGVHRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001194cDENN_dom
IPR043153DENN_C
IPR037516Tripartite_DENN