prot_C-tenellus_contig8321.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8321.1.1
Unique Nameprot_C-tenellus_contig8321.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length539
Homology
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BLAST of mRNA_C-tenellus_contig8321.1.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 9.420e-11
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0 
Query:  174 RLGIVTPEHQEAGMTGHERKERRKIRNRMSAQQHRERQRRHVETLEQCLREKDDQILSLKKQAQELEEKNKNLEERVQKLEA 255
            ++ ++ P      M+  ERKERRKIRNRMSAQQHRERQR+ V+TLE CLR +D++I  L+KQ   L E+NK L ERV +LE+
Sbjct:  212 KISVLAPSSFGGDMSTQERKERRKIRNRMSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNKELAERVLQLES 293
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8321.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBR4_9PHAE9.420e-1156.10Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 215..256
NoneNo IPR availableGENE3D1.20.5.170coord: 190..256
e-value: 2.6E-7
score: 32.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..208
NoneNo IPR availableCDDcd14686bZIPcoord: 193..251
e-value: 2.53523E-14
score: 65.2593
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 192..248
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 188..252
e-value: 0.0044
score: 23.8
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 195..210
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 190..253
score: 10.128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8321contigC-tenellus_contig8321:484..6289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8321.1.1mRNA_C-tenellus_contig8321.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8321 189..6289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8321.1.1 ID=prot_C-tenellus_contig8321.1.1|Name=mRNA_C-tenellus_contig8321.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=539bp
MDPSPPDPRTPSGPVASSPNAVADPGLVKSEPSPAKSLSPALSVPGAVVP
NILPMMVKGGVGGISGAPMFPMFPGMFTPAALAAAAAAASAAVSAGSASG
PSTESMPRKSKDTRKRKRVSEVGEDDIKVEVGEAVDEATGVEVKGDSGAV
SGGGTGGGTGGLGGMLWPGMGRLRLGIVTPEHQEAGMTGHERKERRKIRN
RMSAQQHRERQRRHVETLEQCLREKDDQILSLKKQAQELEEKNKNLEERV
QKLEAGEFPTLEDVLLGLDDTWSSESASHAPPEVLREICTNLSGVLAGDK
DTEVGIKAKTRSRNGTKNHAAMPISSTDLSKTTSDTSMEITRVIETGLSV
CSSLPLELDVEGEVTRATTKAPAIGVVGVEDSDEEVVTTDHAHSSSEEDS
EDLLKLTTIYSSPMESSRGVGGRGEGGVITALPLSPSHDFSGEEGIEQGE
GEEVPADHTVGLTRRYVVPNAVRRMVRRDCGGDGVAGNEELTDGGAGTLT
VTEDAPITGCVEVYDKGGTRVVAVVDGSQIGDDPNPMSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP