prot_C-tenellus_contig7841.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig7841.1.1
Unique Name	prot_C-tenellus_contig7841.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	125

Homology

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A6H5JZE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE1_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 2.260e-61
Identity = 96/117 (82.05%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 124
            QDAI  YTECLD++P K S LAIKCYSNRSACYKQLSNFD TV+DT+AVLE EP NVKAL+RRAQAFEAIERYRFALQDVRTVL MP ++VG+AN  LANGMQHRLNRVVQQLKN+S
Sbjct:   19 QDAIVKYTECLDSLPDKRSELAIKCYSNRSACYKQLSNFDATVEDTTAVLEVEPENVKALVRRAQAFEAIERYRFALQDVRTVLTMPPEKVGSANLSLANGMQHRLNRVVQQLKNAS 135

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A836CLV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV7_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.710e-55
Identity = 90/117 (76.92%), Postives = 101/117 (86.32%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 124
            +DAIK YT+C+D +  +   LA+KC+SNRSACYKQLSNFDG ++DTSAVLE EP NVKAL+RRAQAFEAIERYR+ALQDVRTVL MP DQVGAAN  LANGMQHRLNRVVQQLK  S
Sbjct:  204 EDAIKKYTQCIDALGDRHHALALKCFSNRSACYKQLSNFDGVIEDTSAVLEVEPGNVKALVRRAQAFEAIERYRYALQDVRTVLAMPPDQVGAANISLANGMQHRLNRVVQQLKQDS 320

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A6U1PBN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PBN3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.180e-55
Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNS 123
            ++AI  Y++CLD I +  S LAIKC+ NRSACYKQLSNFDG + D + VLE +PNNVK+L+RRAQAFEA ERYR+ALQDVRTVL MPMDQVG+AN+QLANGMQHRLNRVVQQLKN+
Sbjct:   46 EEAIDKYSKCLDAIGNSESELAIKCFLNRSACYKQLSNFDGVISDCTMVLEVDPNNVKSLVRRAQAFEACERYRYALQDVRTVLQMPMDQVGSANYQLANGMQHRLNRVVQQLKNN 161

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A6V1KEM3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KEM3_HETAK)

HSP 1 Score: 176 bits (447), Expect = 1.970e-52
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 124
            + AI+ YT+CLD +  K+S LAIKCYSNRSACYKQLSNFDG + D + V+EA+P NVKAL+RRAQAFEA ERYRFALQDVRTVL  P + VG AN+QLANGMQHRLNRVVQQLK++S
Sbjct:  204 EGAIQKYTQCLDALSDKSSELAIKCYSNRSACYKQLSNFDGVISDCTMVIEAQPENVKALVRRAQAFEACERYRFALQDVRTVLAQPFELVGQANYQLANGMQHRLNRVVQQLKSAS 320

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: D7FPF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF1_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 7.190e-51
Identity = 88/117 (75.21%), Postives = 97/117 (82.91%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 124
            +DAI  YTECLD++P K S LAIKCYSNRSACYKQLSNFD TV+DT+AVLE EP NVKAL+RRA        YRFALQDVRTVL MP D+VG+AN  LANGMQHRLNRVVQQLKN+S
Sbjct:  204 EDAIVKYTECLDSLPDKRSELAIKCYSNRSACYKQLSNFDATVEDTTAVLEVEPENVKALVRRA--------YRFALQDVRTVLTMPQDKVGSANLSLANGMQHRLNRVVQQLKNAS 312

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S1CX05_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CX05_CYCTE)

HSP 1 Score: 163 bits (413), Expect = 2.730e-47
Identity = 79/115 (68.70%), Postives = 94/115 (81.74%), Query Frame = 0

Query:   10 AIKAYTECLDNIPSK---TSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 121
            AI+ YT+CLDN+  +    SPLA+K YSNR+ACYKQ+SNFDGT+ D + VLE EP NVKAL+RRAQAFE +ERYRFALQD++TVL MP  +VG +NF L NGMQHRLNR VQQLK
Sbjct:  206 AIEEYTKCLDNLQKEGKAESPLALKAYSNRAACYKQISNFDGTISDCTMVLEIEPENVKALIRRAQAFEGVERYRFALQDIKTVLSMPFAKVGKSNFDLCNGMQHRLNRTVQQLK 320

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S3P6E4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6E4_9STRA)

HSP 1 Score: 162 bits (411), Expect = 5.720e-47
Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKT---SPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 121
            ++AI  YT+CL  + SK    SPLA+K YSNR+ACYKQ+SNFDGT+ D +AVLE EP+NVKAL+RRAQAFE +ERYRFALQDV+TVL MP  QVG ANF L NGMQHRL R V QLK
Sbjct:  204 ENAIAEYTKCLKQLESKGQQGSPLAVKTYSNRAACYKQISNFDGTIADCTAVLEVEPDNVKALIRRAQAFEGVERYRFALQDVKTVLQMPSAQVGKANFDLCNGMQHRLQRTVNQLK 320

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S2DVE1_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DVE1_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.110e-46
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSK---TSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 121
            + AI+ YT+C+D + +     S LA+K YSNR+ACYKQ+SNFDGTV+D +AVLE +P NVKAL+RRAQA E +ERYRFALQD++TVL MP D+VG ANF LANGMQHRLNR VQQLK
Sbjct:  205 EGAIEEYTKCIDTLRADGKGQSELAMKAYSNRAACYKQISNFDGTVEDCTAVLEVDPENVKALIRRAQALEGLERYRFALQDIKTVLSMPFDKVGKANFDLANGMQHRLNRTVQQLK 321

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S2VAY3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAY3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.890e-46
Identity = 77/116 (66.38%), Postives = 92/116 (79.31%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPS--KTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 121
            + AI  YT+CLD +    K S LA+K  +NR+ACYKQ+SNFDGT++D +AVLE EP NVKAL+RRAQAFE +ERYRFALQDV+TVL MP  +VG ANF L NGMQHRL+R V QLK
Sbjct:   40 EPAIVEYTKCLDGLKGAEKQSELALKALANRAACYKQISNFDGTIEDCTAVLEVEPENVKALIRRAQAFEGVERYRFALQDVKTVLSMPYQKVGKANFDLCNGMQHRLSRTVAQLK 155

[Close]

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S3GT25_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT25_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.730e-45
Identity = 75/115 (65.22%), Postives = 97/115 (84.35%), Query Frame = 0

Query:    8 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKN 122
            + AIKAYT+CLD++  K+S LA+KCY+NR+AC+KQLSNF+GT+ D++AVLE +P++VKAL+RRAQAFEA ERY+ ALQDVR VL   +D VG   F LANGMQHRLN+V+ QL+N
Sbjct:  204 EGAIKAYTKCLDSMSDKSSELALKCYNNRAACHKQLSNFEGTISDSTAVLEYKPDDVKALVRRAQAFEACERYKSALQDVRQVLAFGVDVVGKPTFDLANGMQHRLNKVIAQLRN 318

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JZE1_9PHAE	2.260e-61	82.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CLV7_9STRA	2.710e-55	76.92	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6U1PBN3_9STRA	3.180e-55	74.14	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6V1KEM3_HETAK	1.970e-52	73.50	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
D7FPF1_ECTSI	7.190e-51	75.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S1CX05_CYCTE	2.730e-47	68.70	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A7S3P6E4_9STRA	5.720e-47	69.23	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S2DVE1_9STRA	1.110e-46	67.52	Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID...	[more]
A0A7S2VAY3_9STRA	2.890e-46	66.38	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S3GT25_9STRA	8.730e-45	65.22	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..115 e-value: 1.6E-21 score: 78.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 8..93
None	No IPR available	PANTHER	PTHR45984	RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOG	coord: 8..117
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..97 score: 10.81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig7841	contig	C-tenellus_contig7841:313..1205 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig7841.1.1	mRNA_C-tenellus_contig7841.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig7841 313..1205 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig7841.1.1 ID=prot_C-tenellus_contig7841.1.1|Name=mRNA_C-tenellus_contig7841.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=125bp
IFSSPPKQDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTV
QDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGA
ANFQLANGMQHRLNRVVQQLKNSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom