prot_C-tenellus_contig784.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig784.3.1
Unique Nameprot_C-tenellus_contig784.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length145
Homology
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BLAST of mRNA_C-tenellus_contig784.3.1 vs. uniprot
Match: D7FXU4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU4_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 1.740e-29
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 0 
Query:   38 PLELCGWGVEDANGSAERTEAMIGELID-WRVILKSTAPSKLLVRPPVRFLFDLFMTISVSTGFAEDLMSGSRWDELQAKKEKVRLMDRMALEISSGLGLAEAPAKGSD 145
            P  + G+G+EDA+GS  RTE M+GE++  W  ILKST P+KLL RPPVRFL+DLF  ++ +TGF ED   GS+W++L  KK+K+R M+ M   ++  LGL   PAKGSD
Sbjct: 1159 PASIAGFGIEDADGSVGRTEVMVGEVMGGWGGILKSTPPAKLLARPPVRFLYDLFRAVAKATGFGEDEACGSKWEDLSGKKDKMRFMEGMIQLVAESLGLENRPAKGSD 1267
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BLAST of mRNA_C-tenellus_contig784.3.1 vs. uniprot
Match: A0A7S4D9Y8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9Y8_HETAK)

HSP 1 Score: 110 bits (275), Expect = 7.130e-27
Identity = 54/107 (50.47%), Postives = 70/107 (65.42%), Query Frame = 0 
Query:   39 LELCGWGVEDANGSAERTEAMIGELIDWRVILKSTAPSKLLVRPPVRFLFDLFMTISVSTGFAEDLMSGSRWDELQAKKEKVRLMDRMALEISSGLGLAEAPAKGSD 145
            + L G G+ D N   E+T  M+G++I W V+LK+T P KLL RPPVRFLFDLF TIS  TG+   LM+ ++W +L  K EK   MDR   ++ + L L EAPAKG D
Sbjct:   38 VSLAGKGLADVNEDIEQTAEMVGQVISWEVLLKTTPPKKLLKRPPVRFLFDLFNTISKDTGYLAALMAEAKWGDLGGKAEKQAFMDRAIAQVVADLELGEAPAKGGD 144
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig784.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXU4_ECTSI1.740e-2953.21Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A7S4D9Y8_HETAK7.130e-2750.47Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040468TRAF3-interacting protein 1, N-terminalPFAMPF10243MIP-T3coord: 68..126
e-value: 6.8E-7
score: 29.2
IPR042576TRAF3-interacting protein 1, N-terminal domain superfamilyGENE3D1.10.418.50coord: 53..143
e-value: 2.3E-10
score: 42.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig784contigC-tenellus_contig784:8650..10311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig784.3.1mRNA_C-tenellus_contig784.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig784 8650..10328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig784.3.1 ID=prot_C-tenellus_contig784.3.1|Name=mRNA_C-tenellus_contig784.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=145bp
MKGNEAGRDGMETMDTSSVKVEETKATRIDTEEDTPKPLELCGWGVEDAN
GSAERTEAMIGELIDWRVILKSTAPSKLLVRPPVRFLFDLFMTISVSTGF
AEDLMSGSRWDELQAKKEKVRLMDRMALEISSGLGLAEAPAKGSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040468TRAF3IP1_N
IPR042576TRAF3IP1_N_sf