prot_C-tenellus_contig7791.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7791.1.1
Unique Nameprot_C-tenellus_contig7791.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length103
Homology
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BLAST of mRNA_C-tenellus_contig7791.1.1 vs. uniprot
Match: D7FXB0_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB0_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 6.860e-25
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    1 LLLSASITGFACLFYIVGTYFDSEPW--VQAIEIVLAVAFFLDYVLSVVAAPVAMAYIISWEGFVDLLSIFPVFGAFRRWIYSLSFIRYLRVGKAIRATRHRRTL 103
            +L ++  T  +C+FYIVGTY  ++    V A E V A+ FF+DYVLSV A  V + Y++S+EG VDL SIFPVFGAF RW+YSLSF+RYLR+GK  R  R+ R L
Sbjct:    5 MLFTSITTLVSCVFYIVGTYTANQHHSIVIAGEAVFALVFFMDYVLSVTAEAVWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVTRVIRNHRML 109
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BLAST of mRNA_C-tenellus_contig7791.1.1 vs. uniprot
Match: A0A6H5K4I5_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I5_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.560e-23
Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 0 
Query:    1 LLLSASITGFACLFYIVGTY--FDSEPWVQAIEIVLAVAFFLDYVLSVVAAPVAMAYIISWEGFVDLLSIFPVFGAFRRWIYSLSFIRYLRVGKAIRATRHRRTL 103
            +L ++  T  +C+F+IVGTY     +  V A E V A+ FF+DYVLSV A  V + Y++S+EG VDL SIFPVFGAF  W+YSLSF+RYLR+GK  R  R+ RTL
Sbjct:   46 MLFTSITTLVSCVFFIVGTYTAHQYDYIVIAGEAVFALVFFVDYVLSVTAEAVRLTYVLSFEGIVDLCSIFPVFGAFYSWLYSLSFVRYLRLGKVTRVIRNHRTL 150
[Close]
BLAST of mRNA_C-tenellus_contig7791.1.1 vs. uniprot
Match: D8LEK1_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK1_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.530e-21
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 0 
Query:   11 ACLFYIVGTYFDSEPWVQAIEIVLAVAFFLDYVLSVVAAPVAMAYIISWEGFVDLLSIFPVFGAFRRWIYSLSFIRYLRVGKAIRATRHRRTL 103
            +CLFYI+ TY     WV+ +E    + F +DY L+VVAAP+ +AY +   G +DL+S  P FG+F+ W+ SLSF+RYLRVGKAIR  R+ + L
Sbjct:   11 SCLFYILATYLHDRHWVRHVETGYGILFLVDYSLTVVAAPIPLAYALGKGGLIDLVSCLPAFGSFQPWMASLSFVRYLRVGKAIRVMRNHKLL 103
[Close]
BLAST of mRNA_C-tenellus_contig7791.1.1 vs. uniprot
Match: A0A6H5JQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ48_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.720e-21
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 LLLSASITGFACLFYIVGTYFDSEPWVQAIEIVLAVAFFLDYVLSVVAAPVAMAYIISWEGFVDLLSIFPVFGAFRRWIYSLSFIRYLRVGKAIRATRHRRTL 103
            +LL +  T  +CLFYI+ TY    PWV  IE    + F +DY L+  AAPV +AY +   G +DL+S  P FG+F+ W+ SLSF+RYLRVGKAIR  R+ + L
Sbjct:   63 MLLLSLATLSSCLFYILATYVHDRPWVGHIETSFGILFLVDYSLTAAAAPVPLAYALGKGGLIDLVSCLPAFGSFQPWMASLSFVRYLRVGKAIRVMRNHKLL 165
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7791.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXB0_ECTSI6.860e-2555.24Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4I5_9PHAE2.560e-2354.29Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LEK1_ECTSI1.530e-2149.46Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQ48_9PHAE2.720e-2148.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 9..101
e-value: 1.2E-8
score: 34.4
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 1..103
e-value: 1.7E-10
score: 42.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 22..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..61
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 10..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7791contigC-tenellus_contig7791:294..1766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7791.1.1mRNA_C-tenellus_contig7791.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7791 294..1766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7791.1.1 ID=prot_C-tenellus_contig7791.1.1|Name=mRNA_C-tenellus_contig7791.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=103bp
LLLSASITGFACLFYIVGTYFDSEPWVQAIEIVLAVAFFLDYVLSVVAAP
VAMAYIISWEGFVDLLSIFPVFGAFRRWIYSLSFIRYLRVGKAIRATRHR
RTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR027359Volt_channel_dom_sf