prot_C-tenellus_contig7729.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7729.1.1
Unique Nameprot_C-tenellus_contig7729.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length226
Homology
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: D8LBL3_ECTSI (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL3_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 3.950e-82
Identity = 153/178 (85.96%), Postives = 166/178 (93.26%), Query Frame = 0
Query:   39 GTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFDNRSGYENFQRVDAVYALPVALVEQLGLKSQMR 216
            G ++V+ AAEFVGRCRNFDGGFGC+PGAESHAGQIFTC+GALSIA SL LVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILS+L+ILGKVDWIDG+RL+ FILRCQD+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX FD R GY++F  VDAVYALPV LVEQLGLKS+MR
Sbjct:  168 GKIDVKKAAEFVGRCRNFDGGFGCIPGAESHAGQIFTCVGALSIARSLHLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSSLKILGKVDWIDGARLKGFILRCQDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDGREGYDSFLPVDAVYALPVPLVEQLGLKSEMR 345          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A836C9T0_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T0_9STRA)

HSP 1 Score: 257 bits (656), Expect = 5.660e-82
Identity = 160/218 (73.39%), Postives = 179/218 (82.11%), Query Frame = 0
Query:    2 SLQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHDGTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYF--DNRSGYEN--FQRVDAVYALPVALVEQLGLKSQM 215
            +LQ+ DG+F GD WGEVDTRFSYCAL++LA+LG L  G V+V  AA FV RCRNFDGGFGC PGAESHAGQ+FTC+GAL+IA +L LVD  LLGWWLC RQCDSGGLNGRPEKQADVCYSWWILSAL ILG+  WIDG+ L  FILRCQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+   D   G +   +  VD VYALP ALV +LGL+SQ+
Sbjct:  115 ALQRPDGAFAGDRWGEVDTRFSYCALASLALLGTLRGGAVDVGAAAAFVARCRNFDGGFGCAPGAESHAGQVFTCVGALAIARALHLVDAPLLGWWLCARQCDSGGLNGRPEKQADVCYSWWILSALAILGRRAWIDGAALARFILRCQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLKTDGSGGADGIVYCDVDPVYALPSALVRELGLESQV 332          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A7S3Y0P3_HETAK (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0P3_HETAK)

HSP 1 Score: 255 bits (652), Expect = 3.930e-81
Identity = 159/231 (68.83%), Postives = 176/231 (76.19%), Query Frame = 0
Query:    2 SLQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHDGT-VNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFDNRSGYE-----------------NFQRVDAVYALPVALVEQLGLKSQ 214
            SLQQ DGSF+GD WGEVDTRFSYCALS LA+LG+L     V+V  AAEFVGRCRNFDGG+GCVPGAESHAGQ+FTC+GALSIA  LDL D  LLGWWL ERQCD+GGLNGRPEKQADVCYSWWILSAL ILGKV WI+  RL+ FIL+CQD   XXXXXXXXXXXXXXXXXXXXXXXXXX YFD  +                      + +D V+ALP  LV  LGL++Q
Sbjct:  125 SLQQPDGSFWGDKWGEVDTRFSYCALSCLALLGRLRTAEGVDVDAAAEFVGRCRNFDGGYGCVPGAESHAGQVFTCVGALSIAHRLDLCDTELLGWWLSERQCDAGGLNGRPEKQADVCYSWWILSALSILGKVSWINTDRLRDFILKCQDREDXXXXXXXXXXXXXXXXXXXXXXXXXXGYFDGAAXXXXXXXXXXXXXXXXXRCPGHRVIDPVFALPADLVAALGLRAQ 355          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A7R9WA00_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WA00_9STRA)

HSP 1 Score: 252 bits (644), Expect = 3.510e-79
Identity = 159/227 (70.04%), Postives = 181/227 (79.74%), Query Frame = 0
Query:    3 LQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHD-----GTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYF---------DNRSGYENFQRVDAVYALPVALVEQLGLKSQM 215
            LQQ DGSF GD WGEVDTRFSYCALSAL+ILG L +     G ++VR AA++V  CRNFDGGFGCVPGAESHAGQIF C+GALSIA SLDL+D  LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL I+G+V WI   +L  FIL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXY          + +S  E ++++D VYALP   V++LGLK+Q+
Sbjct:  164 LQQPDGSFAGDEWGEVDTRFSYCALSALSILGSLPERGEKGGVIDVRKAAQYVASCRNFDGGFGCVPGAESHAGQIFCCVGALSIAKSLDLMDVDLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSIMGRVPWISTVKLGEFILKCQDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLHDVGSTESDEEKSRKECYRKIDPVYALPTDTVQKLGLKAQV 390          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A6U3TTQ5_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TTQ5_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.500e-78
Identity = 158/226 (69.91%), Postives = 174/226 (76.99%), Query Frame = 0
Query:    3 LQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLH-----DGTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYF-----DNRSGYEN---FQRVDAVYALPVALVEQLGLKSQM 215
            LQQ DGSF GD WGE+DTRFSYCALSALAIL KL      DG V+V+ AAE+V  C+NFDGGFGCVPGAESHAGQIF C+GALSIA SL L+D  LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL ILGKV WI   +L  FIL+CQD   XXXXXXXXXXXXXXXXXXXXXXXXXX Y      D     E    ++++D VYALP  +VE+LGL  Q+
Sbjct:  149 LQQPDGSFAGDGWGEIDTRFSYCALSALAILQKLPSPEETDGIVDVKKAAEYVASCKNFDGGFGCVPGAESHAGQIFCCVGALSIAQSLHLLDADLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSILGKVPWISTDKLGGFILQCQDEEDXXXXXXXXXXXXXXXXXXXXXXXXXXGYLNRVRIDGEEDEEERRVYRKIDPVYALPTDVVERLGLSGQI 374          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A7S2UYZ0_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYZ0_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.040e-77
Identity = 153/225 (68.00%), Postives = 172/225 (76.44%), Query Frame = 0
Query:    3 LQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHD----------------GTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFDNRSGYENFQRVDAVYALPVALVEQLGL 211
            LQQ DGSF GD WGEVDTRFSYCAL  LA+LG+L D                  V+V  AAEFV RC NFDGGFGC+PGAESHAGQIF C+GAL+I + LDLV   LLGWWL ERQCDSGGLNGRPEKQADVCYSWWILSAL IL KV+WI+   L  FIL+CQD XXXXXXXXXXXXXXXXXXXXXXXXXX   YFD +S Y +F++++ +YALP  LV++L L
Sbjct:  152 LQQVDGSFVGDEWGEVDTRFSYCALYCLALLGRLSDISEESLEKIQPDGSGQRVVDVAAAAEFVARCTNFDGGFGCLPGAESHAGQIFCCVGALAIVNRLDLVSSDLLGWWLSERQCDSGGLNGRPEKQADVCYSWWILSALSILKKVNWINCDGLISFILKCQDLXXXXXXXXXXXXXXXXXXXXXXXXXXLLGYFDGKSEYSSFKKINPIYALPDDLVQKLRL 376          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A7S2JWC8_9STRA (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWC8_9STRA)

HSP 1 Score: 236 bits (601), Expect = 5.110e-74
Identity = 115/158 (72.78%), Postives = 128/158 (81.01%), Query Frame = 0
Query:    2 SLQQGDGSFYGDMWGEVDTRFSYCALSALAILGKL----HDGT-------VNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILR 148
            SLQQ DGSF GDMWGE+DTRFSYCALSAL+ILG L    +DGT       ++V GAA +V  CRNFDGGFGCVPGAESHAGQIF C+GALSIA +LDL+D  LL WWLCERQCDSGGLNGRPEKQADVCYSWWILSAL ILG+V WI   +L  FI++
Sbjct:  160 SLQQSDGSFAGDMWGEIDTRFSYCALSALSILGLLKRRCNDGTSKAEGELIDVDGAAAYVASCRNFDGGFGCVPGAESHAGQIFCCVGALSIAGALDLLDSDLLCWWLCERQCDSGGLNGRPEKQADVCYSWWILSALSILGRVSWISRDKLADFIVK 317          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: B8C277_THAPS (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C277_THAPS)

HSP 1 Score: 231 bits (589), Expect = 2.920e-71
Identity = 151/230 (65.65%), Postives = 179/230 (77.83%), Query Frame = 0
Query:    3 LQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHDGT---VNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEG-----------LLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFD---NRSGYENFQRVDAVYALPVALVEQLGLKSQM 215
            LQ  DGSF GD WGEVDTRFSYCALS LA+LGKL D     +++  A +++  CRNFDGGFG VPGAESHAGQ+F CIGALSIA SL L+++G           LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL I+G+V+WI+ S+L  FIL CQD  XXXXXXXXXXXXXXXXXXXXXXXXXXXX+     NR G + ++ VD V+ALP+ +V++LGL++Q+
Sbjct:  136 LQNEDGSFSGDEWGEVDTRFSYCALSCLALLGKLPDNKRPIIDIYKAVQYIISCRNFDGGFGSVPGAESHAGQVFCCIGALSIAHSLHLLNDGIDKSSSSGGADLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSIMGRVNWINTSKLGQFILHCQDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGKIGNREG-KLYREVDPVFALPLDVVKKLGLRAQV 364          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A7S0STK9_9STRA (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STK9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.450e-71
Identity = 145/213 (68.08%), Postives = 164/213 (77.00%), Query Frame = 0
Query:    2 SLQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHDGTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFDNRSGYENFQRVDAVYALPVALVEQLGLKSQ 214
            SLQQ DGSF GD WGE+DTRFSYCALS+L+ILGKL DGT+N   A +FV            VPG+ESHAGQIF CIGALSI  +LD VD  LL WWLCERQCDSGGLNGRPEKQADVCYSWWILS L ILG++ WID ++L  +IL+CQD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXYF+N+  Y   + +D  YALP  +V+ L L  Q
Sbjct:  130 SLQQIDGSFAGDCWGEIDTRFSYCALSSLSILGKLKDGTINFDKAVDFVXXXXXXXXXXXAVPGSESHAGQIFCCIGALSICQALDRVDIDLLCWWLCERQCDSGGLNGRPEKQADVCYSWWILSCLSILGRISWIDSNKLIDYILQCQDKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFNNKPHY---REIDPTYALPKDIVQSLQLSHQ 339          
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Match: A0A7S1CUB6_9STRA (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUB6_9STRA)

HSP 1 Score: 223 bits (567), Expect = 5.010e-70
Identity = 145/228 (63.60%), Postives = 173/228 (75.88%), Query Frame = 0
Query:    8 GSFYGDMWGEVDTRFSYCALSALAILGKL----------------HDGTVNVRGAAEFVGRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEG-LLGWWLCERQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFD---NRSGYENFQRVDAVYALPVALVEQLGLKSQM 215
            GSF GD WGE+DTRF+Y A S LA+LGKL                    ++   A +++  CRNFDGGFGCVPGAESHAGQ+FTC+GALSIA SL L+++  LL WWL ERQCDSGGLNGRPEKQADVCYSWWILSAL ILG+VDWI+  +L  FIL CQD XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +   N+ G +N++++D V+ALP  +V +LGLK+Q+
Sbjct:    1 GSFSGDEWGEIDTRFTYIAFSCLALLGKLPLPDWNNSNSTQVVSEEKPIIDTYKAVKYIMSCRNFDGGFGCVPGAESHAGQVFTCVGALSIAQSLHLLEDADLLSWWLAERQCDSGGLNGRPEKQADVCYSWWILSALSILGRVDWINTGKLGQFILNCQDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKIGNKEG-QNYRQIDPVFALPTDVVSRLGLKAQV 227          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7729.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL3_ECTSI3.950e-8285.96Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A836C9T0_9STRA5.660e-8273.39Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7S3Y0P3_HETAK3.930e-8168.83Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7R9WA00_9STRA3.510e-7970.04Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A6U3TTQ5_9STRA5.500e-7869.91Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7S2UYZ0_9STRA1.040e-7768.00Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7S2JWC8_9STRA5.110e-7472.78Geranylgeranyl transferase type-2 subunit beta (Fr... [more]
B8C277_THAPS2.920e-7165.65Geranylgeranyl transferase type-2 subunit beta n=1... [more]
A0A7S0STK9_9STRA5.450e-7168.08Geranylgeranyl transferase type-2 subunit beta (Fr... [more]
A0A7S1CUB6_9STRA5.010e-7063.60Geranylgeranyl transferase type-2 subunit beta (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001330PFTB repeatPFAMPF00432Prenyltranscoord: 2..34
e-value: 1.5E-10
score: 40.6
coord: 42..84
e-value: 3.8E-10
score: 39.3
coord: 93..132
e-value: 7.4E-9
score: 35.2
coord: 145..181
e-value: 1.6E-10
score: 40.5
NoneNo IPR availableGENE3D1.50.10.20coord: 1..217
e-value: 3.2E-78
score: 264.9
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 2..210
NoneNo IPR availablePANTHERPTHR11774:SF11GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETAcoord: 2..210
IPR026873Geranylgeranyl transferase type-2 subunit betaCDDcd02894GGTase-IIcoord: 2..180
e-value: 1.1189E-112
score: 322.295
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 1..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7729contigC-tenellus_contig7729:122..3858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7729.1.1mRNA_C-tenellus_contig7729.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7729 104..3858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7729.1.1 ID=prot_C-tenellus_contig7729.1.1|Name=mRNA_C-tenellus_contig7729.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=226bp
MSLQQGDGSFYGDMWGEVDTRFSYCALSALAILGKLHDGTVNVRGAAEFV
GRCRNFDGGFGCVPGAESHAGQIFTCIGALSIADSLDLVDEGLLGWWLCE
RQCDSGGLNGRPEKQADVCYSWWILSALEILGKVDWIDGSRLQYFILRCQ
DADDGGISERPGNLADIFHTFFGIAGLSLLGYFDNRSGYENFQRVDAVYA
LPVALVEQLGLKSQMRGSLSIKKQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001330PFTB_repeat
IPR026873Ptb1
IPR008930Terpenoid_cyclase/PrenylTrfase