prot_C-tenellus_contig7523.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7523.3.1
Unique Nameprot_C-tenellus_contig7523.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length107
Homology
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 8.280e-43
Identity = 73/100 (73.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI-SFFRLEGLIQCVRMSSEG 107
            GH  AVYVA++SP DSLVASAGFDRTLR+WEGAYPYSQV  L GHRQLI DLCWA DGRSL+S+SFDQTV  WDTETG+R+ +   LEGL+QCV++++EG
Sbjct:  137 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 236          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.450e-22
Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    8 VGHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRIS-FFRLEGLIQCVRMSSEG 107
            VGH  AVY   +SPC +LVAS GFDRT+R+WEG YP+SQV  L  HRQL+ D                      DTETG+R++   RLEG++QCV  +  G
Sbjct:   78 VGHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSDXXXXXXXXXXXXXXXXXXXXXXDTETGQRVNNVLRLEGMLQCVSYADGG 178          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.810e-16
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQ--VGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFRLEGLIQCV 101
            GH GAVY  ++SPC  L+AS   D  + +W+    ++Q  +  L  H QL+ D+ W+ D RSL+S+S+D TV  WDT+ G+ ++   + GL+Q V
Sbjct:  117 GHGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYDHTVNLWDTDKGQLLNSIGVNGLVQTV 211          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 79.3 bits (194), Expect = 4.720e-15
Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   12 GAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQ--VGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFRLEGLIQCV 101
            GAVY  ++SPC  L+AS   D  + +W+    ++Q  +  LT H QLI D+ W+ D RSL+S+S+D TV  WDT+ G+ ++   + GL+Q V
Sbjct:  133 GAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYDHTVNLWDTDKGQLVNSVGVNGLVQTV 224          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A9V9T1_MONBE (Lactoylglutathione lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9T1_MONBE)

HSP 1 Score: 62.4 bits (150), Expect = 4.430e-9
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFR 93
            GH  AVY   +SP   ++A+AGFDR + VW        +  L GH   +  L WA     L S S D+TV  WD  TG+R+  ++
Sbjct:   76 GHAEAVYAGTFSPSGHMLATAGFDRNVYVWNTFGNCENIMSLQGHTGAVLGLHWAKLENRLFSCSSDKTVAVWDGNTGERVRRYK 160          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A512UMM7_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UMM7_9ASCO)

HSP 1 Score: 62.0 bits (149), Expect = 4.790e-9
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQ----VGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI 89
            GH GAV+  ++SP    +ASAG DRT+R+W      ++     G + GH+  +  L W +  + ++S+S D TV  WD ETG+R+
Sbjct:   26 GHSGAVFSVKFSPDGQHIASAGTDRTIRLWNLPTRANEESPNYGVIEGHKGGLTALSWLSQSK-ILSTSADSTVSIWDAETGQRL 109          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A4P6XGR8_9ASCO (Prp8 binding protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XGR8_9ASCO)

HSP 1 Score: 62.0 bits (149), Expect = 4.940e-9
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVW----EGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI 89
            GH+GA    ++SP    +ASAG DRT+R+W    +        G + GH+  +  L W A  + + + S D TV  WD ETG+R+
Sbjct:   35 GHEGAALCVKFSPDGQNIASAGLDRTIRLWNLPTDAKDEVPNYGVIEGHKGAVTCLDWLAQSK-IFTGSADSTVAFWDAETGQRV 118          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A1A0HJF3_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HJF3_9ASCO)

HSP 1 Score: 61.2 bits (147), Expect = 9.050e-9
Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVWE----GAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRI 89
            GH GAV+   +S     +ASAG DRT+R+W             G + GH++ I  L W    + ++S+S D TV  WD ETG+R+
Sbjct:   26 GHTGAVFSIEFSADGHNIASAGMDRTIRLWNLPTTADNEAPNYGVIEGHKKAITSLSWILSSK-ILSASADSTVSVWDAETGQRL 109          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A1I8C310_9BILA (WD_REPEATS_REGION domain-containing protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8C310_9BILA)

HSP 1 Score: 61.2 bits (147), Expect = 9.820e-9
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
Query:    9 GHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGK 87
            GH+  V+ AR++    +VA+AGFD+ + +W          +  GH+  + DL ++ D   L S S D+TV  WD E GK
Sbjct:   57 GHEAEVFTARFAGSGDIVATAGFDKQILLWNVWGECENYSHFKGHKHSVMDLKFSTDTSCLFSGSADKTVRAWDLENGK 135          
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Match: A0A261Y8R7_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y8R7_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 3.760e-8
Identity = 37/100 (37.00%), Postives = 46/100 (46.00%), Query Frame = 0
Query:   10 HKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYP-----------------YSQVGYLTGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFF 92
            H G V V R+ P   ++ASAG D TL +WE + P                 Y     L GHR  I DL W+ DGR L++ S D T   WD  T + I  F
Sbjct:   85 HTGPVNVVRWHPKGGVLASAGDDATLIIWERSDPGQGSSTFGEDTSANIETYRVNQMLLGHRNEIYDLAWSPDGRYLITGSIDNTARLWDWTTRQCIHVF 184          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7523.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE8.280e-4373.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSR1_9STRA1.450e-2246.53WD40-repeat-containing domain protein (Fragment) n... [more]
A0A1V9Z1V2_9STRA3.810e-1640.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QW05_SAPDV4.720e-1541.30Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A9V9T1_MONBE4.430e-937.65Lactoylglutathione lyase n=1 Tax=Monosiga brevicol... [more]
A0A512UMM7_9ASCO4.790e-937.65Uncharacterized protein n=1 Tax=Metschnikowia sp. ... [more]
A0A4P6XGR8_9ASCO4.940e-936.47Prp8 binding protein n=1 Tax=Metschnikowia aff. pu... [more]
A0A1A0HJF3_9ASCO9.050e-937.65Uncharacterized protein n=1 Tax=Metschnikowia bicu... [more]
A0A1I8C310_9BILA9.820e-935.44WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]
A0A261Y8R7_9FUNG3.760e-837.00Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..39
e-value: 6.5E-4
score: 29.0
coord: 43..82
e-value: 0.0017
score: 27.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 9..38
e-value: 0.0012
score: 19.6
coord: 47..82
e-value: 0.0023
score: 18.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 7..39
score: 11.845
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 50..91
score: 12.313
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..107
e-value: 9.1E-23
score: 82.7
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 48..94
coord: 9..85
NoneNo IPR availablePANTHERPTHR19848:SF0NOTCHLESS HOMOLOG 1 (DROSOPHILA)coord: 48..94
coord: 9..85
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 69..83
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 26..40
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 7..91
score: 17.851
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7523contigC-tenellus_contig7523:5346..6161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7523.3.1mRNA_C-tenellus_contig7523.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7523 5346..6161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7523.3.1 ID=prot_C-tenellus_contig7523.3.1|Name=mRNA_C-tenellus_contig7523.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp
MFIRVTQVGHKGAVYVARYSPCDSLVASAGFDRTLRVWEGAYPYSQVGYL
TGHRQLIGDLCWAADGRSLMSSSFDQTVLGWDTETGKRISFFRLEGLIQC
VRMSSEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf