prot_C-tenellus_contig7519.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7519.1.2
Unique Nameprot_C-tenellus_contig7519.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length274
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7519.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 136..217
e-value: 2.2E-9
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..239
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 152..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7519contigC-tenellus_contig7519:3375..5951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7519.1.2mRNA_C-tenellus_contig7519.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig7519 3194..6001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7519.1.2 ID=prot_C-tenellus_contig7519.1.2|Name=mRNA_C-tenellus_contig7519.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=274bp
MKKDVEGARSVVVVEGTIPNSSPATAITSSTQASDSLGKINPENEGRLRE
PIDAGDMGALYKTLDAVGCLPPPPCEQREGDNDTDSDMVIDVENGAPETG
AGDGCPFATTSSNFHLVKKAASSVQVPPNLILEAWRVLKEWRAKLGPSDL
ADVYNTADKKWYLAKILEAFSSDSASTATQSGIGIGDEIRIHYQGWPSKY
DENIRRDSHFLQPPNAHTKPRKKPQKKSRKPQERQSSATAPARVLFFFAP
SLSSLDHQTSFPPKAPMRSCLFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016197Chromo-like_dom_sf