mRNA_C-tenellus_contig7493.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A0A6H5JSY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE) HSP 1 Score: 166 bits (421), Expect = 4.150e-46 Identity = 88/160 (55.00%), Postives = 112/160 (70.00%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLF-CNAGVSSRGSILETP----GLSVMDT--NLWGAVGLAKAVLPSMLDRESGHIVAIAG 462 +VVWVTGA G GE++AINLAVNGA+VIL+G +L+ELERVQR+CILAWMKAV+WE+ A ++G RLD ++ PLD RD+ +LD AA+ AE +LD P+ M+F C G G E L V D NL GA+ L KAVLPSMLD + GH+V + G Sbjct: 240 EVVWVTGADHGFGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDARDTFILDRAASKAEEMLDRPVGMVFHCQGGGVVAGEWDEEEEEEGDLDVEDASGNLRGAIALTKAVLPSMLDEQEGHLVVLGG 399
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: D8LHS3_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI) HSP 1 Score: 160 bits (406), Expect = 1.440e-43 Identity = 87/170 (51.18%), Postives = 110/170 (64.71%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLF-CNAGVSSRGSI----------------LETPGLSVMDTNLWGAVGLAKAVLPSMLDRESGHIVAIAG 462 +V WVTGA GLGE++AINLAVNGA+VIL+G +L+ELERVQR+CILAWMKAV+WE+ A ++G RLD ++ PLDVRD+ +LD A AE +LD P+ M+F C G G LE G NL GA+ L KAVLPSMLD + GH+V + G Sbjct: 304 KVAWVTGADHGLGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDVRDTFILDHATRKAEDMLDRPVGMVFHCQGGGVVAGEWDEEDEXXXXXXXXDLDLEASG------NLRGAISLTKAVLPSMLDEQEGHLVVLGG 467
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A0A836CN07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN07_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.720e-34 Identity = 75/162 (46.30%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 10 VWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAA--------SAEGLLDLPIDMLFCNAGVSSRGSILETPGLS---VMDTNLWGAVGLAKAVLPSMLDRESGHIVAIAG 462 VWVTGA SG+G+++AI A GA V+LTGRNL+EL RVQR C+ AW +A + +AF++GW+ +VA +FP+DVRD+ A +AE L PID+L AGVSSR +LET + VMD + GA L +A LP+ML R G + A++G Sbjct: 114 VWVTGASSGIGKQVAIQAAAAGAHVLLTGRNLEELARVQRACVAAWKRARRYTRARAFLEGWRPAEVAYLFPMDVRDTEFAPEAVKRMAYVSMEAAEERLGRPIDVLIHCAGVSSRAPVLETSTSTDREVMDASFLGAAALTRAALPAMLRRGGGAVAAVSG 275
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: UPI00140B2A9F (SDR family oxidoreductase n=1 Tax=Marinobacter salicampi TaxID=435907 RepID=UPI00140B2A9F) HSP 1 Score: 95.9 bits (237), Expect = 4.400e-21 Identity = 66/154 (42.86%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDL--PIDMLFCNAGVSSRGSILETPGLSV----MDTNLWGAVGLAKAVLPSMLDRESGHI 447 QVVW+TGA SG+GE LA+ LA GAK++L+ R ELERV C+ A G +DV +V PLDV D L+A + +LD ID+L NAG+S R S+ + L V +D ++ G + L KAVLP ML R SGHI Sbjct: 21 QVVWITGASSGIGEALAVGLAAQGAKLVLSARRKAELERVAMRCLQA---------------GLTEVDV-MVLPLDVTD---LEAMPEATNTVLDRFSHIDLLVNNAGLSQR-SLCKDTDLDVYKKLLDVDVLGQIALTKAVLPHMLQRHSGHI 154
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A0A651GVI9_9BACT (SDR family oxidoreductase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A651GVI9_9BACT) HSP 1 Score: 95.1 bits (235), Expect = 6.410e-21 Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLFCNAGVSSRGSILETPGLS---VMDTNLWGAVGLAKAVLPSMLDRESGHIVAI 456 +VVW+TGA SG+GE LA GA +IL+ R ELERV+ CI A + VK + PLD+ D++ ++ A A L +DML N G+S R +E+ + VM+ N +G V L KAVLPSM+++ SGHIV I Sbjct: 6 KVVWITGASSGIGEALAYEFNKRGALIILSSRRENELERVKEACIDAEER----------VK---------ILPLDLADANSIEEKAEEARNLFG-SVDMLINNGGISQRAYAVESSMETIRQVMEVNFFGTVALTKAVLPSMIEQNSGHIVVI 139
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A6GCL7_9DELT (Oxidoreductase n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6GCL7_9DELT) HSP 1 Score: 95.1 bits (235), Expect = 6.410e-21 Identity = 62/156 (39.74%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDL--PIDMLFCNAGVSSRGSILETP---GLSVMDTNLWGAVGLAKAVLPSMLDRESGHIVAI 456 +VVW+TGA SG+GE LAI LA GA +IL+ R +LE V+ C +R LV PLD+ ++ L A A +LD ID+L N G+S RG++++T +M+ N G V L KAVLPSML+R SGH+V + Sbjct: 7 KVVWITGASSGIGEALAIELAKRGASLILSARREAQLEAVRGRC--------------------ERAREHLVLPLDLTETESLAPATAK---VLDHFGRIDVLVNNGGISQRGTVVDTDIAVDRRIMEVNYMGTVALTKAVLPSMLERRSGHVVVV 139
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A0A6C1N071_9GAMM (SDR family oxidoreductase n=1 Tax=Halomonadaceae bacterium TaxID=2026746 RepID=A0A6C1N071_9GAMM) HSP 1 Score: 95.1 bits (235), Expect = 6.520e-21 Identity = 62/156 (39.74%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLFCNAGVSSRGSILETPGLSV----MDTNLWGAVGLAKAVLPSMLDRESGHIVAIA 459 QVVW+TGA SG+GE LA+N+A AK++L+ R ELERV+ C+ A N LV PLDV DS L A + ID+L NAG+S R S+ + +SV M+ ++ G + L KAVLP ML R GH+ A Sbjct: 5 QVVWITGASSGIGEALALNMAARNAKLVLSARRQGELERVKAACVAAGAAPEN----------------VLVLPLDVTDSDRLTPATDTVLATFG-QIDLLINNAGLSQR-SLCKDTDMSVYRQLMEVDVLGQIALTKAVLPHMLKRRQGHLAVTA 142
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A0A6L9LA52_9BACT (SDR family oxidoreductase n=1 Tax=Spirosoma terrae TaxID=1968276 RepID=A0A6L9LA52_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 1.280e-20 Identity = 64/153 (41.83%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLFCNAGVSSRGSILETPGLSV----MDTNLWGAVGLAKAVLPSMLDRESGHIV 450 QVVW+TGA SG+GE LAI L GAK+IL+ R ELERV L LV PLD+ D+ L A A+ + ID +F NAG++ R ++L+T SV MD N +G V L KAVLP ML + SGH V Sbjct: 7 QVVWITGASSGIGEALAIQLGKEGAKLILSARRRDELERVASQTTLP-------------------ASSVLVLPLDITDTDSLPAHVATVQQHFGR-IDYIFQNAGITQRSTVLDTD-FSVYKRLMDINFFGVVALTKAVLPIMLRQRSGHFV 138
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: A0A2T2U7T3_9BACT (Short chain dehydrogenase (Fragment) n=1 Tax=Bacteroidetes bacterium QH_2_63_10 TaxID=1919092 RepID=A0A2T2U7T3_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 2.480e-20 Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 7 VVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLFCNAGVSSRGSILETPG---LSVMDTNLWGAVGLAKAVLPSMLDRESGHIVAI 456 +VW+TGA SG+GE LA L+ GA+++L+ R LE V+ C +R LV PLD+ L AAA + + P+D+L N G+S RG+ ET +M+ N +GAV L KAVLPSM++R+ GH+V + Sbjct: 7 LVWITGASSGIGEALAYELSRRGARLVLSSRREDALEAVRERC--------------------RRPGEHLVQPLDLARPDTLRAAADAVRDTVG-PVDVLVNNGGISQRGTAAETEMEVVRRIMEVNFFGAVQLTKAVLPSMIERQQGHVVVV 138
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Match: UPI001FF658C1 (SDR family oxidoreductase n=1 Tax=Kordiimonas sp. 5E331 TaxID=2917717 RepID=UPI001FF658C1) HSP 1 Score: 93.6 bits (231), Expect = 2.510e-20 Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 4 QVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMKAVNWEIFKAFVKGWKRLDVALVFPLDVRDSHVLDAAAASAEGLLDLPIDMLFCNAGVSSRGSILETPGLS---VMDTNLWGAVGLAKAVLPSMLDRESGHIVAIA 459 QVVW+TGA SG+GE +A+ +A GA +IL+ R EL RV+ C+ A N +V PLDV D L A A IDML+ NAG+S R + LET + + + +++G + L K VLP ML++ +GH+ A Sbjct: 5 QVVWITGASSGIGEAVALEMATEGASLILSARRESELTRVKEACVARGAAAEN----------------VMVLPLDVTDEASLAEKVAEARAFKGC-IDMLYNNAGISQRSTCLETDMATYRRLFEVDVFGQIALTKEVLPVMLEQGNGHMAVTA 142 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7493.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7493.1.1 >prot_C-tenellus_contig7493.1.1 ID=prot_C-tenellus_contig7493.1.1|Name=mRNA_C-tenellus_contig7493.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=154bp MQVVWVTGAGSGLGERLAINLAVNGAKVILTGRNLKELERVQRICILAWMback to top mRNA from alignment at C-tenellus_contig7493:519..6286+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7493.1.1 ID=mRNA_C-tenellus_contig7493.1.1|Name=mRNA_C-tenellus_contig7493.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5768bp|location=Sequence derived from alignment at C-tenellus_contig7493:519..6286+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7493:519..6286+ >mRNA_C-tenellus_contig7493.1.1 ID=mRNA_C-tenellus_contig7493.1.1|Name=mRNA_C-tenellus_contig7493.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=462bp|location=Sequence derived from alignment at C-tenellus_contig7493:519..6286+ (Choristocarpus tenellus KU2346)back to top |