prot_C-tenellus_contig7317.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7317.2.1
Unique Nameprot_C-tenellus_contig7317.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length208
Homology
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BLAST of mRNA_C-tenellus_contig7317.2.1 vs. uniprot
Match: D8LR68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR68_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.310e-17
Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 0 
Query:   81 VRIEVCAHRSIEQASVLLASLSNSILLVMRRGSEGSAFRRCLLDWTVQGKIRGLCISHDLQCALCITDGL-AVYLLPIEDL 160
            V IEV AH ++   ++L+ASLSNS LL++R GS+G   R  LLDW V GKIRG+C+S DLQC LC T+GL  VYLL +++L
Sbjct:   25 VGIEVFAHGALGTDALLVASLSNSALLILRIGSDG--IRSWLLDWPVAGKIRGMCVSPDLQCVLCATEGLEGVYLLAVDNL 103
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BLAST of mRNA_C-tenellus_contig7317.2.1 vs. uniprot
Match: A0A6H5KV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV72_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.970e-16
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0 
Query:   81 VRIEVCAHRSIEQASVLLASLSNSILLVMRRGSEGSAFRRCLLDWTVQGKIRGLCISHDLQCALCITDGL-AVYLLPIEDL 160
            V IEV AH ++   ++L+ASLSNS LL++R GS+    R  LLDW V GKIRG+C+S DLQC LC T+GL  VYLL +++L
Sbjct:   25 VGIEVFAHGALGTDALLVASLSNSALLILRIGSD--CIRSWLLDWPVAGKIRGMCVSPDLQCVLCATEGLEGVYLLAVDNL 103
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7317.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR68_ECTSI2.310e-1756.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV72_9PHAE3.970e-1655.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7317contigC-tenellus_contig7317:421..3425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7317.2.1mRNA_C-tenellus_contig7317.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7317 368..3585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7317.2.1 ID=prot_C-tenellus_contig7317.2.1|Name=mRNA_C-tenellus_contig7317.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=208bp
MSSTPQLVRLASVRTVRRRAAEDVRYRARPSYTPMSDLGLSMSPVGTDRK
NLSNSLSVSERSDTTHGDQDLEGFTTTTDEVRIEVCAHRSIEQASVLLAS
LSNSILLVMRRGSEGSAFRRCLLDWTVQGKIRGLCISHDLQCALCITDGL
AVYLLPIEDLHSNGDGGGSATQGAGNSGPGTLQGQQNPVAAASLSLLRPA
PPPSCCS*
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