mRNA_C-tenellus_contig7224.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: D8LDT8_ECTSI (Laminin IV type A domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT8_ECTSI) HSP 1 Score: 229 bits (584), Expect = 4.170e-71 Identity = 112/174 (64.37%), Postives = 136/174 (78.16%), Query Frame = 1 Query: 7 TTTIAPLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITTQA--VVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIVHT 522 T++ APLALHQVV V PGGEAVIRL GYDLDGD+L ATI+SLP SG L+QLSKV+S+YGYDP AG++I VTGSGNRV+Y+RP DAEP G WG FTYTV DGS +AK GT++LVS G L A+EF G G W+VCQ+ C ARH+PSSRGL+++F+SG D+IVH+ Sbjct: 56 TSSAAPLALHQVVSVSPGGEAVIRLSGYDLDGDDLVATISSLPESGTLHQLSKVYSEYGYDPAAGEVIAGSGGVEVTGSGNRVVYKRPAADAEPTGRWGSFTYTVSDGSDSAKAGTVYLVSGGGLLEAAEFDFGVGTWKVCQSGGSYCEAARHDPSSRGLLSFFLSGSDTIVHS 229
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A7S4DHG6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHG6_HETAK) HSP 1 Score: 166 bits (421), Expect = 2.760e-47 Identity = 85/168 (50.60%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 19 APLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITTQAV-VTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIVH 519 APLA HQ+V V PG E VI L GYDLDGD L +I SLPSSG LYQLS+V+S +GYDPK G IT+ VTGS NR++Y RP++D+ W FTYTV DG+ T+ +GT+ LV G + S+F G DW++ N + + A +E SSRGL+N++I G D +++ Sbjct: 25 APLAPHQLVQVDPGSEVVITLAGYDLDGDSLTVSIESLPSSGRLYQLSQVYSTHGYDPKQGTAITSSGTQVTGSKNRIVYSRPSVDSVKYEKWDTFTYTVFDGTTTSAEGTVTLVPKTGVMVGSDFLLGNEDWKITGN-KASNSLATYEASSRGLVNHYIHGTDDLIN 191
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A7R9W2D7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2D7_9STRA) HSP 1 Score: 159 bits (402), Expect = 7.580e-45 Identity = 81/172 (47.09%), Postives = 114/172 (66.28%), Query Frame = 1 Query: 7 TTTIAPLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITT-QAVVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIVH 519 T ++APLALH + V GGE VI L GYDLDGD+ ATITSLP+SG L+QL+ +F ++GYDPKAG ITT + VTG+G+R++Y+RP +D E G W RF YTV D + ++ GT+ LV + AS+F + W N G + +EP+SRG+MN+++ D I++ Sbjct: 49 TKSVAPLALHHLHEVEAGGELVIPLHGYDLDGDKTVATITSLPTSGTLHQLTSIFDKHGYDPKAGTQITTVPSQVTGTGSRLVYKRPAIDREQNGEWDRFEYTVSDRTSESRAGTVTLVGPSRSVVASDFRFSSDGWTTVGNRNNGVS---YEPTSRGIMNHYVYAADDILN 217
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A7S2CSJ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSJ5_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.680e-44 Identity = 84/170 (49.41%), Postives = 111/170 (65.29%), Query Frame = 1 Query: 16 IAPLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGL-YQLSKVFSQYGYDPKAGDLITTQAVVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIVHT 522 + P+A HQ+V+V GE VI + GYDLDGD L A++ +LP S L YQLSKVFS YGY+PK G I+ VTGS NRVLY+RP++D+ P GAWG FTYTV T+ G I LV G + AS F+ A W++ N + ++A E SSRG++N+FI G D ++T Sbjct: 35 LPPIAPHQLVMVDSSGEFVIAMRGYDLDGDSLVASLKTLPGSPSLLYQLSKVFSDYGYEPKMGTSISASVNVTGSQNRVLYKRPSIDSLPLGAWGIFTYTVSAADSTSLPGMITLVPPSGLIVASHFAQSAEGWKIVGN-KAASSSALFESSSRGILNHFIYGSDDTINT 203
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A7S3ZSM5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSM5_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.100e-42 Identity = 83/167 (49.70%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 22 PLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITTQAVVTGSGNRVLYRRPTMDAEPQ-GAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGL-MNYFISGLDSIV 516 P+A H VVV PG EAV+ L GYD DGD L ATITSLPSSG L+QLSKV+S +GYDPK G + A VTGS NRV Y RP D EP G W F YT+ DG+ T+K T+ LV R+ AS F W + +N G A H+ SS G +N F+ D ++ Sbjct: 19 PIAKHVTVVVNPGEEAVVDLRGYDTDGDPLSATITSLPSSGALHQLSKVYSTHGYDPKKGKAASVNAPVTGSRNRVHYVRPEYDVEPSSGKWASFAYTINDGTSTSKAATVTLVGPSRRVVASPFDASHEQWSIVRNG-AGSGPATHDASSFGKGLNRFVVATDELI 184
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A7R9W2Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2Q5_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.180e-39 Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = 1 Query: 7 TTTIAPLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITT-QAVVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQN 429 T ++APLALH + V GGE VI L GYDLDGD+ ATITSLP+SG L+QL+ +F ++GYDPKAG ITT + VTG+G+R++Y+RP +D E G W RF YTV D + ++ GT+ LV + AS+F + W N Sbjct: 49 TKSVAPLALHHLHEVEAGGELVIPLHGYDLDGDKTVATITSLPTSGTLHQLTSIFDKHGYDPKAGTQITTVPSQVTGTGSRLVYKRPAIDREQNGEWDRFEYTVSDRTSESRAGTVTLVGPSRSVVASDFRFSSDGWTTVGN 190
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A5A8EIX4_CAFRO (Laminin IV type A domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8EIX4_CAFRO) HSP 1 Score: 128 bits (322), Expect = 1.190e-32 Identity = 69/172 (40.12%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 25 LALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITT----QAVVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDR----LGCNTARHEPSSRGLMNYFISGLDSIV 516 LA H V GG I LPG+D G + A IT+LP G L+QLS+V+S YGY+PK G +T+ V+GSGNR+LY P P+G W RF Y V DG +T++ G ++L+ GR+ S+FS G W + +N + R E SRG +++F+SG D + Sbjct: 25 LAKHLTATVDAGGLVEIALPGFDKLGRKRWARITALPEVGSLFQLSQVYSDYGYEPKQGPELTSLTSLPVTVSGSGNRILYAPPAGANPPEGQWARFQYVVTDGKETSEPGIVWLLPLHGRMVGSDFSLGTDGWAIVRNGAKEAAMPSGGIRWEAYSRGDLSFFVSGSDGQI 196
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A7S1Z683_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z683_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.210e-32 Identity = 66/151 (43.71%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 70 VIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITT-QAVVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIVH 519 V+ L GYDL+GD+ ATIT LP+SG LYQLS V++++GYDPKAG IT+ VTG +R++Y+RP +D E G W RF YTV DG +++ G + L++ + AS+F + W N + G + +EP+SRG+MN +I D+ ++ Sbjct: 2 VLALHGYDLNGDKTLATITKLPTSGKLYQLSYVYNKHGYDPKAGVQITSIPCNVTGDKSRLVYKRPAIDQEHNGEWDRFDYTVSDGKASSRAGIVTLIAPSRLVVASDFRLSSEGWSTIGNRKNGVS---YEPTSRGVMNRYIYAADNSLN 149
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A1V9ZF96_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZF96_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.610e-31 Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 1 Query: 22 PLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPK--AGDLITTQAVVTGSGNRVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVSSDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIVHT 522 P+A H VV+V PG + V+ L GY L G L TITSLP+ G LYQLS+VFS YGYDPK A L + VTGS RV++ RP + + FTYTV DG+ T++ G I VS + +S+F W + N + + +P+SRG ++Y+I G D+++HT Sbjct: 879 PVARHLVVLVDPGQDVVVTLKGYSLSGLPLTYTITSLPTQGSLYQLSQVFSDYGYDPKKQASPLAAIPSPVTGSKARVVFSRPFTASPLDSKFAEFTYTVNDGATTSQAG-IVTVSQGAAVMSSQFYFDTDGWSIVHNHQN--SPPVFDPTSRGALSYYIYGTDAMIHT 1044
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Match: A0A2R5G6K2_9STRA (Laminin IV type A domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6K2_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.110e-30 Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 22 PLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLYQLSKVFSQYGYDPKAGDLITTQAVVTGSGN--------RVLYRRPTMDAEPQGAWGRFTYTVMDGSKTAKDGTIFLVS----SDGRLAASEFSTGAGDWQVCQNDRLGCNTARHEPSSRGLMNYFISGLDSIV 516 P A H V V PG I L GYD DGD+L+ATITSLP++G LY L+KV++Q+G+ PK +T V+T +G+ R++Y P + A+P G F+YTV DG + G + +++ SD LAAS+F GA W + N R HE SS L+N+FI +D ++ Sbjct: 28 PKAHHLVYRVAPGKSVEISLVGYDYDGDKLQATITSLPAAGTLYDLAKVYAQHGHSPK----YSTSTVITSAGHPVPVRSKLRIMYEAPRVAAKP-GKLATFSYTVSDGQAASAQGHVTIIADTEVSDHVLAASDFRDGADGWTILSNSRAAQQAPVHERSSYRLLNHFIYAVDELL 199 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7224.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7224.1.1 >prot_C-tenellus_contig7224.1.1 ID=prot_C-tenellus_contig7224.1.1|Name=mRNA_C-tenellus_contig7224.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=174bp MRTTTIAPLALHQVVVVPPGGEAVIRLPGYDLDGDELEATITSLPSSGGLback to top mRNA from alignment at C-tenellus_contig7224:1343..6492+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7224.1.1 ID=mRNA_C-tenellus_contig7224.1.1|Name=mRNA_C-tenellus_contig7224.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5150bp|location=Sequence derived from alignment at C-tenellus_contig7224:1343..6492+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7224:1343..6492+ >mRNA_C-tenellus_contig7224.1.1 ID=mRNA_C-tenellus_contig7224.1.1|Name=mRNA_C-tenellus_contig7224.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=522bp|location=Sequence derived from alignment at C-tenellus_contig7224:1343..6492+ (Choristocarpus tenellus KU2346)back to top |