mRNA_C-tenellus_contig10163.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: D8LBA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA5_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 6.470e-141 Identity = 225/315 (71.43%), Postives = 252/315 (80.00%), Query Frame = 1 Query: 256 PIVSWTAMARSNPAPFKPVIKPDPAPLKPATSAISEPTLSGRSPGDHFNGSG-DNDKQWGTGDKPVRPDGGVAGSSRILSSAAGFGVSDGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKKG 1197 P SW+ MARSNPAPFK K DPAPL A T P HF SG + D+P RPDG G+SRI+S+AA FGVS GGA+DDDGEGWVNPSN K+QKAAGIGLNGP Q Q+KG R ++CRAGCVTTDFAMQNV+LQVGL L+SLDGMA+ VKQWILRCAACFKTCT+MGRLFCPVCGNATLDRVSCS++A +GA RVHLRKNHK NLRGSKFSIP+ +P KGRFEGDLLLREDQLLSGIWAQKARR KDVSSMFGED+T NVGL++SKS D++VGYGRKNPN+A+GRERRGKKG Sbjct: 240 PTSSWSLMARSNPAPFKVPAKADPAPLPAAXXXXXLDTDD--DPAGHFTTSGVASPGAAAAADRP-RPDGAKPGTSRIMSTAAAFGVSGGGADDDDGEGWVNPSNIKSQKAAGIGLNGPSQTQRKGSHKGRSTVASQCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVHRVKQWILRCAACFKTCTEMGRLFCPVCGNATLDRVSCSVNANSGATRVHLRKNHKVNLRGSKFSIPAANPAKGRFEGDLLLREDQLLSGIWAQKARRKEKDVSSMFGEDITGNVGLTVSKSADLVVGYGRKNPNSARGRERRGKKG 551
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A6H5KFQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ3_9PHAE) HSP 1 Score: 400 bits (1029), Expect = 1.350e-130 Identity = 217/316 (68.67%), Postives = 244/316 (77.22%), Query Frame = 1 Query: 256 PIVSWTAMARSNPAPFKPVIKPDPAPLKPATSAISEPTLSGRSPGDHFNGSGDNDKQWGTG--DKPVRPDGGVAGSSRILSSAAGFGVSDGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKKG 1197 P SW+ MARSNPAPFK K DPAPL +A + P + P HF SG T D+P RPDG G+SRI+S+AA FG GWVNPSN K+QKAAGIGLNGP Q Q+KG R ++CRAGCVTTDFAMQNV+LQVGL L+SLDGMA+ VKQWILRCAACFKTCT+MGRLFCPVCGNATLDRVSCS++A +GA RVHLRKNHK NLRGSKFSIP+ +P KGRFEGDLLLREDQLLSGIWAQKARR KDVSSMFGED+T NVGL++SKS DI+VGYGRKNPN+A+GRERRGKKG Sbjct: 411 PTSSWSLMARSNPAPFKVPAKADPAPLP---AAAAPPLATDNDPVGHFATSGAASPGAATAAADRP-RPDGATPGTSRIMSTAAAFG------------GWVNPSNIKSQKAAGIGLNGPSQTQRKGIHKGRSKVASQCRAGCVTTDFAMQNVILQVGLPLLSLDGMAVHRVKQWILRCAACFKTCTEMGRLFCPVCGNATLDRVSCSVNANSGATRVHLRKNHKVNLRGSKFSIPAANPAKGRFEGDLLLREDQLLSGIWAQKARRKEKDVSSMFGEDITGNVGLTVSKSADIVVGYGRKNPNSARGRERRGKKG 710
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A835YK00_9STRA (Putative RNA binding protein NOB1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK00_9STRA) HSP 1 Score: 286 bits (733), Expect = 4.960e-89 Identity = 151/246 (61.38%), Postives = 185/246 (75.20%), Query Frame = 1 Query: 475 SSRILSSAAGFGVSDGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQK-KGKGGRRRDEQN-----KCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISK-SPDILVGYGRKNPNAAKGRERRGK 1191 SSRIL+ ++ GV+ A +DDG GWV P+NF K+ G+ L+GP K KG RRR ++ +CRAGCVTTDFAMQNVLLQ+GL L+S++GMA+R VK W+LRCAACFKT TDM +LFCPVCGN+TLD+VSCS+D ATG MR+HL K NLRG+K+SIP GRF GDLLLREDQL+SGIWAQK++RTVK MFGE + VGLS+ K S ++VGYGRKNPN+ +GRERRGK Sbjct: 238 SSRILNISSSTGVTSVDAAEDDGIGWVTPANFAEVKSTGLSLSGPAPGGKSKGAKARRRAREDAKALAQCRAGCVTTDFAMQNVLLQMGLPLLSVNGMAVRRVKHWVLRCAACFKTTTDMEKLFCPVCGNSTLDKVSCSVDGATGQMRLHLNPKRKPNLRGTKYSIPKPG-VSGRFNGDLLLREDQLMSGIWAQKSKRTVKSQGCMFGEHIMDGVGLSMGKQSAGVVVGYGRKNPNSQRGRERRGK 482
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A7S3XQN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN7_HETAK) HSP 1 Score: 226 bits (576), Expect = 3.400e-69 Identity = 109/177 (61.58%), Postives = 137/177 (77.40%), Query Frame = 1 Query: 670 AGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNN--LRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKK 1194 AGC TTDFAMQNVL+Q+GL L+S+DGM +R VKQW+LRC ACFK DM RLFCP CG TL +VS S+DA TG ++HLRK + G+++S+P+ GRF+G+LLLREDQL GIW QKA RT K+VSS FGED+T N G++++K+PDI+VG+GR+NPN KGRERRGKK Sbjct: 27 AGCATTDFAMQNVLVQIGLPLLSVDGMVVRRVKQWVLRCHACFKLTHDMTRLFCPTCGGPTLQKVSVSLDARTGRAKLHLRKKGRRPPAQAGARYSLPAPGKA-GRFQGELLLREDQLKMGIWQQKANRTKKNVSSAFGEDITQNFGMNVNKAPDIVVGFGRRNPNQMKGRERRGKK 202
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A6G0W830_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W830_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.980e-67 Identity = 127/240 (52.92%), Postives = 159/240 (66.25%), Query Frame = 1 Query: 478 SRILSSAAGFGV-SDGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKK 1194 SRILS AGF S+ GAEDDDG+ WVN +N + G N + + + + GC+TTD++MQNVLLQ+GL L+S DGM I VKQWIL+CAACFKT T++ R FCPVCGN TL+R+SCS+D T + ++ R N LRGSKFS+P PT GR GDLLLREDQL+ GIWAQ+ + + K + S FGE V ++G+ K I VG+GR NPNA KGRERRGKK Sbjct: 235 SRILS--AGFNAASNAGAEDDDGKNWVNAANQAEYSQSPFGSNKEV-----------KAIDSTIQVGCITTDYSMQNVLLQMGLHLISTDGMVINRVKQWILKCAACFKTTTELTRQFCPVCGNHTLERISCSLDKDTEQLTLYTRANRPMKLRGSKFSLPM--PTGGR-NGDLLLREDQLMHGIWAQRQKSSAKVLKSAFGEHVAHDLGVKAEKQTSITVGFGRMNPNAQKGRERRGKK 458
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A1W0A030_9STRA (RNA-binding protein NOB1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A030_9STRA) HSP 1 Score: 229 bits (584), Expect = 5.410e-67 Identity = 123/240 (51.25%), Postives = 161/240 (67.08%), Query Frame = 1 Query: 478 SRILSSAAGFGVS-DGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKK 1194 SRILS AGF S + GA+DDDG+ WVN N ++ G + Q DE+ K GC+TTD++MQNV+LQ+GL L+S DGM I+ VKQW+L+CAAC+KT T++ R FCPVCGNATL+RV+CS+D T + ++ R N LRG+KFS+P KG +GD+LLREDQLL GIW Q+ + + K + S FGE V ++G+ + K I +GYGR NPNA KGRERRGKK Sbjct: 250 SRILS--AGFAASSNAGADDDDGKNWVNVENSTQYTSSPFGTGTSVDQV---------DEKTK--VGCITTDYSMQNVMLQMGLNLLSTDGMVIKRVKQWVLKCAACYKTTTELTRQFCPVCGNATLERVACSLDKDTEQLTLYTRANRPTKLRGTKFSLPMP---KGGRQGDILLREDQLLHGIWGQRQKASSKVMKSAFGEHVAHDLGVKVEKQTSITIGYGRMNPNAQKGRERRGKK 473
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A067BW92_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BW92_SAPPC) HSP 1 Score: 226 bits (576), Expect = 4.080e-66 Identity = 123/243 (50.62%), Postives = 161/243 (66.26%), Query Frame = 1 Query: 478 SRILSSAAGFGV-SDGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKKGSG 1203 SRILS AGF S+ GA+DDDG+ WVN N + G +++ DE K GC+TTD++MQNV+LQ+GL L+S DGM I+ VKQW+L+C ACFKT T++ R FCPVCGNATL+RV+CS+D T + ++ R N LRG+KFS+P+ KG +GDLLLREDQL+ GIW Q+ + + K + S FGE V ++G+ + K I +GYGR NPNA KGRERRGKK G Sbjct: 220 SRILS--AGFAAQSNVGADDDDGKNWVNVENATQFTTSPFGTGTAVEKV---------DENMK--VGCITTDYSMQNVMLQMGLHLLSTDGMVIKRVKQWVLKCVACFKTTTELERQFCPVCGNATLERVACSLDKETEQLTLYTRANRPTKLRGTKFSLPAP---KGGRQGDLLLREDQLMHGIWGQRQKASSKVMKSAFGEHVAHDLGVKVEKQTSITIGYGRMNPNAQKGRERRGKKKRG 446
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: W4FU81_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FU81_9STRA) HSP 1 Score: 227 bits (578), Expect = 4.380e-66 Identity = 127/240 (52.92%), Postives = 162/240 (67.50%), Query Frame = 1 Query: 478 SRILSSAAGFGVS-DGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKK 1194 SRILS AGFG S + GAE DDG+ WV+ N KA+ +G L Q + N + GC+TTD++MQNVLLQ+GL L+S DGM I VKQW+L+CAAC+KT T++ R FCPVCGN T++R++CS+D T + ++ R N NLRGSKFS+P PT GR GDLLLREDQL+ GIWAQ+ + + K + S FGE V ++G+ K I VGYGR NPN+ KGRERRGKK Sbjct: 249 SRILS--AGFGASTNAGAEGDDGKNWVHNDN-KAEYTHSPFGSGKLTQA---------IDANVVQVGCITTDYSMQNVLLQMGLHLISTDGMVINRVKQWVLKCAACYKTTTELDRQFCPVCGNNTMERIACSLDKDTEQLTLYTRANRPANLRGSKFSLPM--PTGGR-SGDLLLREDQLMHGIWAQRQKSSAKVLKSAFGEHVAHDLGVKAEKQTTITVGYGRMNPNSQKGRERRGKK 473
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A1V9Z2B6_9STRA (RNA-binding protein NOB1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2B6_9STRA) HSP 1 Score: 225 bits (574), Expect = 7.480e-66 Identity = 121/241 (50.21%), Postives = 159/241 (65.98%), Query Frame = 1 Query: 478 SRILSSAAGFGVS-DGGAEDDDGEGWVNPSNFKAQKAAGIGLNGPLQQQKKGKGGRRRDE-QNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKK 1194 SRILS AGF S + GA+DDDG+ WVN N + G G D+ + + GC+TTD++MQNV+LQ+GL L+S DGM I+ VKQW+L+C ACFKT T++ R FCPVCGNATL+RV+CS+D T + ++ R N LRG+KFS+P KG +GDLLLREDQL+ GIW Q+ + + K + S FGE V ++G+ + K +I +GYGR NPNA KGRERRGKK Sbjct: 217 SRILS--AGFAASSNAGADDDDGKNWVNAENSTQFTTSPFGT------------GTATDKVDDTMKVGCITTDYSMQNVMLQMGLHLLSTDGMVIKRVKQWVLKCVACFKTTTELDRQFCPVCGNATLERVACSLDKETEQLTLYTRANRPTKLRGTKFSLPMP---KGGRQGDLLLREDQLMHGIWGQRQKASSKVMKSAFGEHVAHDLGVKVEKQTNITIGYGRMNPNAQKGRERRGKK 440
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Match: A0A024U277_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U277_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.330e-65 Identity = 126/247 (51.01%), Postives = 161/247 (65.18%), Query Frame = 1 Query: 478 SRILSSAAGFGVS-DGGAEDDDGEGWVNPSNFK--AQKAAGIG-----LNGPLQQQKKGKGGRRRDEQNKCRAGCVTTDFAMQNVLLQVGLQLVSLDGMAIRNVKQWILRCAACFKTCTDMGRLFCPVCGNATLDRVSCSIDAATGAMRVHLRKNHKNNLRGSKFSIPSVSPTKGRFEGDLLLREDQLLSGIWAQKARRTVKDVSSMFGEDVTLNVGLSISKSPDILVGYGRKNPNAAKGRERRGKK 1194 SRILS AGFG S + GA+ DDG+ W+N +N AQ G G ++ +Q GC+TTD++MQNVL+Q+GL L+S DGM I VKQWIL+CAACFKT T++ R FCPVCGN ++R++CS+D T + ++ R N NLRGSKFS+P PT GR +GDLLLREDQL+ GIWAQ+ + + K + S FGE V ++G+ K I VGYGR NPNA KGRERRGKK Sbjct: 241 SRILS--AGFGASTNAGADGDDGKNWINSTNMAEFAQSPFGSGKLTHAIDASIQ------------------VGCITTDYSMQNVLVQMGLHLLSTDGMVIHRVKQWILKCAACFKTTTELDRKFCPVCGNNLMERIACSLDKDTEQLTLYTRANRPANLRGSKFSLPM--PTGGR-QGDLLLREDQLMHGIWAQRQKTSAKVLKSAFGEHVAHDLGVKAEKQTAITVGYGRMNPNAQKGRERRGKK 464 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10163.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10163.3.1 >prot_C-tenellus_contig10163.3.1 ID=prot_C-tenellus_contig10163.3.1|Name=mRNA_C-tenellus_contig10163.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=403bp GGGGGEGESGEVKDWELVGEGEESDDSDDDDWEPEGGENVEPEDTMETTSback to top mRNA from alignment at C-tenellus_contig10163:3263..5654- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10163.3.1 ID=mRNA_C-tenellus_contig10163.3.1|Name=mRNA_C-tenellus_contig10163.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2392bp|location=Sequence derived from alignment at C-tenellus_contig10163:3263..5654- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10163:3263..5654- >mRNA_C-tenellus_contig10163.3.1 ID=mRNA_C-tenellus_contig10163.3.1|Name=mRNA_C-tenellus_contig10163.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1209bp|location=Sequence derived from alignment at C-tenellus_contig10163:3263..5654- (Choristocarpus tenellus KU2346)back to top |