prot_C-tenellus_contig6874.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6874.1.1
Unique Nameprot_C-tenellus_contig6874.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length45
Homology
[Close]
BLAST of mRNA_C-tenellus_contig6874.1.1 vs. uniprot
Match: A0A6H5L473_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L473_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 7.950e-14
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    1 MNTWTTHDLSAAGYAVHGLVGARIGKLFQEHVVRFSLSPRRADNK 45
            M +WT H+LS+ GY V GLVGAR+G+LF+EHVVRFSL PRR DN+
Sbjct:    1 MTSWTQHELSSGGYTVQGLVGARVGRLFREHVVRFSLPPRRGDNR 45
[Close]
BLAST of mRNA_C-tenellus_contig6874.1.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.080e-13
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    1 MNTWTTHDLSAAGYAVHGLVGARIGKLFQEHVVRFSLSPRRADNK 45
            M +WT H+LS+ GY V GLVGAR+G+LF+EHVVRFSL PRR DN+
Sbjct:   14 MTSWTQHELSSGGYTVQGLVGARVGRLFREHVVRFSLPPRRRDNR 58
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6874.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L473_9PHAE7.950e-1468.89AAA_11 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FK70_ECTSI1.080e-1368.89tRNA-splicing endonuclease positive effector n=1 T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6874contigC-tenellus_contig6874:407..541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6874.1.1mRNA_C-tenellus_contig6874.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6874 407..553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6874.1.1 ID=prot_C-tenellus_contig6874.1.1|Name=mRNA_C-tenellus_contig6874.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=45bp
MNTWTTHDLSAAGYAVHGLVGARIGKLFQEHVVRFSLSPRRADNK
back to top