prot_C-tenellus_contig6839.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6839.1.1
Unique Nameprot_C-tenellus_contig6839.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length41
Homology
BLAST of mRNA_C-tenellus_contig6839.1.1 vs. uniprot
Match: D8LTW9_ECTSI (Bardet-Bield syndrome 8, Tetratricopeptide repeat domain 8 isoform B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW9_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.410e-7
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MDDNATADAPRPGTSLTRPMTKSGGPDQSIRPITRCASHL 40
            MDDNATA+APRPGTSL RPMTK GG +QS+RP+T     L
Sbjct:   11 MDDNATAEAPRPGTSLNRPMTK-GGHNQSMRPMTSTGRPL 49          
BLAST of mRNA_C-tenellus_contig6839.1.1 vs. uniprot
Match: A0A7S1CCY2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCY2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.660e-6
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 MDDNATADAPRPGTSLTRPMT-KSGGPDQSIRPITRCASHL 40
            +DDNA A APRPGTSL RP   + GGPDQS+RP+T     L
Sbjct:   83 LDDNAMAQAPRPGTSLARPSEGRGGGPDQSVRPVTGAGRPL 123          
BLAST of mRNA_C-tenellus_contig6839.1.1 vs. uniprot
Match: A0A6U6Q178_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U6Q178_9DINO)

HSP 1 Score: 48.1 bits (113), Expect = 1.600e-5
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MDDNATADAPRPGTSLTRPMTKS---GGPDQSIRPITRCASHL 40
            MD+NA A APRPGTSL RP+T++   GGP Q +RP++     L
Sbjct:   71 MDENAVAQAPRPGTSLNRPLTRADAAGGPSQVVRPVSASGRPL 113          
BLAST of mRNA_C-tenellus_contig6839.1.1 vs. uniprot
Match: A0A836CMW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW3_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 6.130e-5
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    1 MDDNATADAPRPGTSLTRPMTKSGGPDQSIR 31
            +D NATAD PRPGTSL RPMT++GG +Q +R
Sbjct:   58 LDSNATADMPRPGTSLNRPMTRAGGLEQGMR 88          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6839.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTW9_ECTSI1.410e-770.00Bardet-Bield syndrome 8, Tetratricopeptide repeat ... [more]
A0A7S1CCY2_9STRA2.660e-660.98Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6U6Q178_9DINO1.600e-553.49Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A836CMW3_9STRA6.130e-567.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6839contigC-tenellus_contig6839:1002..1124 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6839.1.1mRNA_C-tenellus_contig6839.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6839 1002..1154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6839.1.1 ID=prot_C-tenellus_contig6839.1.1|Name=mRNA_C-tenellus_contig6839.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=41bp
MDDNATADAPRPGTSLTRPMTKSGGPDQSIRPITRCASHL*
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