mRNA_C-tenellus_contig6747.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 8.570e-151 Identity = 272/525 (51.81%), Postives = 338/525 (64.38%), Query Frame = 2 Query: 188 NDPFKVLMDASASLVQQLRRDELVPELGKQLSNSS-PPPAYGYFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQDFTQYRDLDQVIVTVALVPPKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARV-SGWETRTHLLPDQRVFDKPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLSSGYSGGNQRAGLLSVNHIRSPPPESLWHYLR---GSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDAYCCHGLTVMAESGGEHGEGDRLILIGQDFTTRQAYKRETRTEELPSMREAVSEIG 1747 +DPF VL +A+ L+ LRRDEL PEL KQL+ + + YFCDP+ L Q++ + F LP L+RERDRVECM+FMGLLPEI HAW++VDNVLYLW+Y TQDFTQ+R+L+QVIVTVALVPPK+GVF V+++L VATT+EV+LLAVT ++ E R++VR TNF+A TDGVSMLKI HPNGRVFMAGKDGNLYEL Y V YGF YSVF VG +R+C RLA S+S V ++ LLGLR +RVLV++VVD +RN++YTLD G +DLFDLG DGN T QK + FN+W A R C +G +HL F P +Q+VSL VV ES+ + LVAV+++GMR YLS G SGG + L++ IR PPPE LW YL XXXXXXX +GFP K R P+VY AYCC G+TV+A++ +GDRL+LIG D TR KRE R EE PSMREAV+E+G Sbjct: 9 HDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQ-------------ETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKNNVFNIWIRAARFCQGYGNGQSGLSHL-----TFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQP--PSVYGAYCCGGVTVLAQA---LAQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMG 510
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.190e-73 Identity = 180/493 (36.51%), Postives = 255/493 (51.72%), Query Frame = 2 Query: 158 GHGTNNLASPNDPFKVLMDASASLVQQLRRDELV-PELGKQLSNSSPPPAYGYFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQ--TQDFTQYRDLDQVIVTVALVPPKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRV--TYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVV-------------PALLTLLGLRSGDRV---------------------------LVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHLLPDQRVFDKPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLSSGYSGGN----QRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVIS 1489 G+GT+ F L DA +V L +DE L QL ++ A+GYFC+P LG +E + LP L + R++ +FMGLLPE++HAWLSVDN L LW+Y ++++L+QVIV V L P++GVF+ VKY+LVVAT +EVVL+AVT GG +GR++VRPT F A +DGV+M I GHP GR+FMAGKDGNLYEL Y G++ S +G S+G+RKCR++ R+ ++PSS V A +T G +G V L+D+ VD +RN +YT+D G + ++LG DG QT+ +LW A+ + C S R +PD R F+ H + V+L VVD E +HLV V+++GMR YL Q L V H+R+PPP +LW + + ++P+ P P G + Sbjct: 8 GNGTSQ------DFSALADAHGEVVSHLLQDEAQNTTLYSQLLDNPGGAAHGYFCEPHTADQLGLPLELRSTIPLPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT-------DGG---------------DGRLDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATGWL-SYVGLGGSSGSRKCRKINRS--TTPSSAVWNSFKQGRSRAARGAAITSPGPMAGLLVKRLPRVTAARAXXXXXXXXXXXAGAASLLDLAVDPLRNALYTVDSTGVLRHYNLGPDGQQTVPVGGDLDLWAASGQFCRLHS--TNRAQDVPDARAFEPGHGLEAVALSVVDACEDACVHLVVVASSGMRVYLGPSGRASEIDTAQATSPLRVLHVRAPPPAALWEHRKALANPAAGAAPPSQPPTGFAA 467
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA) HSP 1 Score: 255 bits (652), Expect = 8.400e-70 Identity = 174/476 (36.55%), Postives = 249/476 (52.31%), Query Frame = 2 Query: 314 FCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQ------DFTQYRDLDQVIVTVALVPPKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCAR-VSGWETRTHLLPDQRVFDKPHPY-----QVVSLQVVDPLESQEIHLVAVSNAGMRFYLS--SGYSGGN--------QRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDAYCCHGLTVMAESGGEHGEGDRLILIGQDFTT 1675 F +P+ + G V EG +PP L + ++CMSFMGLLPEI AWLS+DN L+LW+Y+ DF ++ LDQ+IV+VALVPP+ GVF++ VKY+L VAT +E+VLLAV ++ + G G+ L G + +RPT+F +D V+M+K+ G +GR+FM G DG+LYE Y F + +G RKCR+L ++ S SS+VP L L S + LVD+VVD +R I+Y L D ++ +DLG++G+ + L + + C R S + PD R+FD P ++VS+ VV E+ +HLV VSNAG RFY+S S Y +R LSV H+R+PPP + S G P EG+PP+ ++S +V+ AY CHG V AE G + E D + + DF T Sbjct: 11 FPEPYQ-STWGGAVHYEGVTAVPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAFEEPEGTG--------VLGQPLG-LNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGLG-LGFGMAGRKCRKLNHSA-SPLSSLVPGFLKQLSAPS--KPLVDVVVDDVRQILYALREDNSLEGYDLGVNGDLLKPFGTRIQLRREVKHWCERHTSSYRPG----PDSRLFDSTKPTSGALDKIVSMNVVPLTEANNVHLVLVSNAGFRFYVSTVSRYHSSXXXXXXXXAKRPTTLSVVHVRAPPPVEVG---------SARGEPM---------------------EGYPPRYSPQTSSRSVHSAYYCHGCLVTAEGGAD--EADTVRVSQPDFCT 436
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.820e-52 Identity = 169/558 (30.29%), Postives = 251/558 (44.98%), Query Frame = 2 Query: 197 FKVLMDASASLVQQLRRDELVPELGKQLSNSSPPPAYG---YFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQT------------------QDFTQYRDLDQVIVTVALVPPKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTYGFMYSVFFVGDSTGTRKCRRLARTS-NSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHLLPDQRVFDKPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLS---------------SGYSGGNQRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDAYCCHGLTVMAESGGEHGEGDRLILIGQDFTTRQ--------AYKRETRTEELPSMREAV 1735 FK+L AS +L +LR DE ++ Q S P +G Y+ +P+ G +E F LP + + ++EC SFMG LPE+ W++VDN L+LW Y + +D Y + +VIV+VAL PK GVF D VKY+LVVA+ +EVVLLAVT ++ N ++ PT + +D V+M+K+VG +GR+FMAG DGN+YEL+Y + ++ G KCR++ + N ++P L + LVD+ VD++R +VY + G + F LG G +T S FN+ AA RT VS P+ + V+SL V+ ES+++H+VAV G+R YLS SG G + V ++RSPP + SS + S + P G+ S P + S + V A G+T++A +H D L+ + +D R AY+ PSMRE V Sbjct: 3 FKILEKASETLQDKLRLDESALDIADQFSFR--PDMHGSHRYYTEPYKT-QWGPLLEYGSFTALPKRILDQYTKIECASFMGTLPELGRVWVTVDNKLFLWKYTSAPSTSFPNEVAEDVDAISEDCEVYDGISEVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDEQGN---------------------NFKLVPTAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYSNSESVWSALVDAGGEHSRHKCRKINHFAWNWRLVHILPPFLK--SFAGEEDSLVDLAVDNVRQVVYAITAKGVLSAFYLGSTGTETTLFLSSFNVLDAA-RTHLTVSRSLPEGSPKPESFANTTAPGFNVLSLHVLPLTESKKVHVVAVLGNGIRIYLSLLTANRGLFNYMPGPQQQSGNYSVPGGVEVAYVRSPPSPAALRVCSNSSGRLS----SASAPDGIQSAGGAGAGAELENGSAPSYM--PSQALKVSSALYSQGVTMLALDKQQHP--DELVCLFEDLVGRAHLTLGLPPAYQH-------PSMREGV 518
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: I2CP24_NANGC (Nuclear pore complex protein Nup155 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP24_NANGC) HSP 1 Score: 198 bits (503), Expect = 1.400e-51 Identity = 136/386 (35.23%), Postives = 198/386 (51.30%), Query Frame = 2 Query: 311 YFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQ-DFTQYRDLDQVIVTVALVPPKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTYG-FMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHLLPDQRVFDKPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLSS----GYSGGN---QRAGLLSVNHIRSPPPESLWHYLRGSSDP 1441 ++ P+ + G VE + PP + R ++ MSF GL EIH AW++VDN+LY+WDY T+ DLDQ+IV V LV P VF+D V ++LV T V L A+ +D + ++VR TNF+ TDGV M K+VG GR+F+AG+DG++YE++Y + YS + KCR+L RTS + S V A+L L ++ +VD+VVD R+I+Y+L D I ++DLG + +++ A R + H QR F K HP++++SL V+ ES HL+AVSNAG RFY + Y G R L++ +R PP S+W LRG +P Sbjct: 80 FYIHPWKDPAFGPPVEYQSLRPFPPAILRTYSLLQAMSFQGLWTEIHRAWITVDNLLYIWDYHTEASHAIVDDLDQLIVAVGLVRPNPEVFKDTVTHLLVACTPSAVELFALCFEDGTP-------------------DSALQVRRTNFRVSTDGVVMRKVVGTRTGRIFLAGQDGSVYEIQYSNEKDLYFYS---------SNKCRKLNRTSGPA-SLAVSAVLRHLW-KTNVSEIVDLVVDPTRSILYSLSADNLIQVYDLGEKDDACTSLGIKEDVFTMALR-------YFKHRHRGEQQR-FTKGHPFRLLSLHVLSCSESATKHLLAVSNAGHRFYFETCPKTPYIGSKLFAPRPSTLALVDVRLPPKPSVWEALRGHGEP 427
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA) HSP 1 Score: 197 bits (500), Expect = 1.180e-49 Identity = 142/473 (30.02%), Postives = 225/473 (47.57%), Query Frame = 2 Query: 371 VQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQDFTQYRDLDQVIVTVALVPPKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHLLPDQRVFDKPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLSSGYSGGN------QRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDA-YCCHGLTVMAESGGEHGEGDRLILIGQDFTTRQAYKRETRTEELPSMREAVSEIGGRGAISG 1768 + LP L + +EC F+GL PEI+ AW++VDN L LW+Y+++++ + D DQ+IV+V L+PPKR VF + VKY+LV+AT +E+VLLAV +D +G + + PT D V+M+KIVG GR+FM G DG+LYELEY+ G+ +++ R++ T ++ AL + S ++DIV+D RNI+YTL G I+++DLG DG A+ N+ +A+ C R+ + V S+ V+ ES+ + LVA++++ +R Y S+ G+ QR L + HIR PP L H ++ GGP + GF R + P D Y G+ ++ +S GE D ++ I Q + + T+T +L R + E + ++G Sbjct: 94 IPLPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWFEDNTP-------------------QGEIHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEGWF-----------SKRARKINHT-----RGIMSALTSYW---SAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDGLGFQHVAAMSNVIASAETLCPRLKFTQIGKEA-------------SVKSIAVIPKSESKYLTLVAITSSALRLYFSALSLSGDAAAIPSQRPTKLELIHIRFPP--DLTHEYTKVTEA---GGPLTPVRPAAYEAAARTPRAAGRPFGFDVAARRQAGPPYNIDTTYYSQGVVLLGQSVGER---DEVVAIKQTIDQQPSA---TQTGDLIISRPLLLEKATKTEVAG 504
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A3F2RNV8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNV8_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.010e-49 Identity = 178/542 (32.84%), Postives = 255/542 (47.05%), Query Frame = 2 Query: 197 FKVLMDASASLVQQLRRDELVPELGKQLSNSSPPPAYGYFCDPFVPGSLGSQVEREGFV-QLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQDFTQYRDLDQVIVTVALVP-PKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTY-----------GFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHL-LPDQRVFDK-----PHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLSS-----GYSGGN---QRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDAYCCHGLTVMAESGGEHGEGDRLILIGQDFTTRQAYKRETR-TEELPSMREAVS 1738 FK L+DA + Q + D P+L QL+ S P YF +P+ SQV ++G V LP +A D + +S GLLPE+ AW SVD L+LW Y + ++ DQ +V V LV P GVF V+++LVVATT+EVVLLAV D + A+ +G +L+ T TD + +IV +GRVF G DG LYE Y + +V VG + G CR++A T S + +P L GL S +VD+ VD R+I+Y L D + +FDLG G+++ + NL A+ + RT + PD+R+F P+P Q+V+L V P ES+ + LVAV++ G+RFYL++ GYSGG +R L + HIR PPP LR + P HA EG P + AV+ A+ G+ + E G + D+L+ I D + A +T P++REAVS Sbjct: 14 FKGLLDAKTRVDQATQEDASYPDLADQLNAQSEP--QNYFFEPYA-SQWTSQVAKKGSVIPLPGIVAAALDDTKTLSLSGLLPELRAAWTSVDARLFLWSYAQRGRFAAKEFDQAVVAVGLVARPAAGVFTSKVRHVLVVATTVEVVLLAVVADDNQP------DRADGSGPTSFKLQ------RTKLSVSTDKCVVRRIVTTRDGRVFFGGSDGALYEFLYAPAQRAAADRNSLLGAALTNVPGVGGADG---CRKVAHT--FSYAQYLPRFLA--GLASAPGKVVDMCVDHARHILYILHDDTQVSVFDLGAKGDES-KAVCVVNLLAEG----AKYARENRRTRVSCPDERLFQPAVTGTPNPLQIVALAAVSPDESKLVTLVAVASNGIRFYLTAFSRRFGYSGGAGKAKRPSRLEILHIRLPPPAIA---LRDAP-------PYHAK------------------EGMQPGYAPGKSPSAVHVAFHRKGVFLCIE--GRRDQQDQLVGIAHDPISTTALPMQTGLAARKPTIREAVS 498
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A0W8D134_PHYNI (Nucleoporin_N domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D134_PHYNI) HSP 1 Score: 193 bits (491), Expect = 9.260e-49 Identity = 172/543 (31.68%), Postives = 248/543 (45.67%), Query Frame = 2 Query: 197 FKVLMDASASLVQQLRRDELVPELGKQLSNSSPPPAYGYFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQDFTQYRDLDQVIVTVALVP-PKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYR-----------VTYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHL-LPDQRVFD-----KPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLS----------SGYSGGNQRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDAYCCHGLTVMAESGGEHGEGDRLILIGQDFTTRQAYKRETR-TEELPSMREAVS 1738 FK L DA + Q + D P+L QL+ S P YF +P+ ++ + LP +A D + +S GLLPEI AW SVDN L+LW Y + ++ DQ IV V LV P GVF V+++LVVATT+EVVLLAV D + E + +++ T TD + K+V +GR+F G DG LYE Y + + +V VG S G CR++A T SS + +P L GL S +VD+ VD R+I+Y L D + +FDLG +G++ I+ NL A+ + RT + PD+R+F P+P +VV+L V P ES+ + LVAV++ G+RFYL+ +G G +R L + HIR PPP LR + P H+ EG P + AV+ A+ G+ + E G + D+L+ I D + A T P++REAVS Sbjct: 8 FKGLSDAKTRVDQATQEDASFPDLADQLNAQSEP--QNYFFEPYASQWTPQVAKKGSVIPLPGVVAAALDDAKTLSLSGLLPEIRSAWTSVDNRLFLWSYAQRGRFAAKEFDQAIVAVGLVARPATGVFTSKVRHVLVVATTVEVVLLAVVADDNQP----------------ESMS--FKLQSTKLSVSTDKCVVRKVVTTRSGRIFFGGSDGVLYEFLYAPEQKAAADRNSLLGSALTNVPGVGASEG---CRKVAHT--SSYAQYLPRFLA--GLASAPGKVVDMCVDHSRHILYVLHDDAQVSVFDLGANGDE-IKAVCAVNLLADG----AKYARENRRTRVSCPDERLFQPAVAGSPNPLKVVALSTVSPDESKVVTLVAVTSNGIRFYLTVFSRRYTYSGAGNYGRAKRPSRLEILHIRLPPPAIS---LRDAP-------PYHSK------------------EGMQPGYAPGKSPSAVHVAFHRKGVFLCIE--GRRDQQDQLVGIAHDPISTTALPVHTGLAARKPTIREAVS 488
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A433PJF9_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJF9_9FUNG) HSP 1 Score: 194 bits (493), Expect = 9.380e-49 Identity = 142/422 (33.65%), Postives = 210/422 (49.76%), Query Frame = 2 Query: 197 FKVLMDASASLVQQLRRDELVPELGKQLSNSSPPPAYGYFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQT-QDFTQYRDLDQVIVTVALVPPKRG-----------VFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYRVTYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHLLPDQRVFDKPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLS---SGYSGGNQRAG------LLSVNHIRSPP 1399 + L +A+ +L QL RD+ PEL L + Y +P ++R+ + LP L + D ++C FMGL PEI+ AW++VD+ L+LW+YQ DF + D DQVIV+V LV P+ G +F D ++Y+LV+AT IE++LL ++L NVG ++ G + + T +D VSM IVG NGR+FM G DG+LYEL Y+ G+ TRKCR+L TS S ++P L L + + + I +D RN++YTL I++ LG D +Q I+ A + + + AQ C T L D R F Q+VS+ V ES+ IHLVAV+++G R Y + + G + G L + H+R PP Sbjct: 85 YTSLKNAAKTLDVQLTRDQKQPELADVLMSIQSSSEYDQPTNP-----SWQMIQRKRIITLPDALFEQYDLLQCRCFMGLFPEINRAWITVDHRLFLWNYQDGSDFYSFEDQDQVIVSVGLVKPRLGLYLSFDSSVKRIFIDQIEYLLVLATPIEIILLGMSLNGVANVG---------TSNSYARPTGELTLYVTQMSVPSDNVSMTSIVGTDNGRIFMCGNDGHLYELIYQAEEGWF-----------TRKCRKLNHTSTPY-SHLMPTFLKL----TQEDPIAAIALDDSRNVLYTLSHKSNIEVIYLGADCDQFIKVAKNAEIAKQAQLLCP--------TSPLLDSRNF------QIVSIHPVLSTESRLIHLVAVASSGCRLYFTHYRGAFRGPAPQRGERPPPTALELIHVRVPP 462
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Match: A0A8J5ISG2_9STRA (Nucleoporin_N domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5ISG2_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.550e-48 Identity = 175/543 (32.23%), Postives = 252/543 (46.41%), Query Frame = 2 Query: 197 FKVLMDASASLVQQLRRDELVPELGKQLSNSSPPPAYGYFCDPFVPGSLGSQVEREGFVQLPPHLARERDRVECMSFMGLLPEIHHAWLSVDNVLYLWDYQTQDFTQYRDLDQVIVTVALVP-PKRGVFQDAVKYILVVATTIEVVLLAVTLKDRKNVGGGRGKGANAAGEAWEELEGRVEVRPTNFKAGTDGVSMLKIVGHPNGRVFMAGKDGNLYELEYR-----------VTYGFMYSVFFVGDSTGTRKCRRLARTSNSSPSSVVPALLTLLGLRSGDRVLVDIVVDSMRNIVYTLDCDGGIDLFDLGLDGNQTIQKASHFNLWQAAQRTCARVSGWETRTHL-LPDQRVFD-----KPHPYQVVSLQVVDPLESQEIHLVAVSNAGMRFYLSS-----GYSG-GN----QRAGLLSVNHIRSPPPESLWHYLRGSSDPSTPGGPSHALPGGVISXXXXXXXXXXXXEGFPPKIGRSSTSPAVYDAYCCHGLTVMAESGGEHGEGDRLILIGQDFTTRQAYKRETR-TEELPSMREAVS 1738 FK L DA + Q + D P+L QL+ S P YF +P+ ++ + LP +A D + +S GLLPEI AW SVDN L+LW Y + ++ DQ IV V LV P GVF V+++LVVATT+EVVLLAV D + + + +++ T TD + K+V +GR+F G DG LYE Y + + +V VG S G CR++A T SS + +P L GL S +VD+ V+ R+I+Y L D + +FDLG +G+ I+ NL A+ + RT + PD+R+F P+P +VV+L V P ES+ + LVAV++ G+RFYL++ YSG GN +R L + HIR PPP LR + P HA EG P + AV+ A+ G+ + E G + D+L+ I D + A +T T P++REAVS Sbjct: 892 FKGLSDAKTRVDQATQEDASFPDLADQLNVQSEP--QNYFFEPYASQWTPQVAKKGSVIPLPGVVAAALDDTKTLSLSGLLPEIRSAWTSVDNRLFLWSYAQRGRFAAKEFDQAIVAVGLVARPATGVFTSKVRHVLVVATTVEVVLLAVVADDNQP----------------DSMS--FKLQSTKLSVSTDKCVVRKVVTTRSGRIFFGGSDGALYEFLYAPEQKAAADRNSLLGSALTNVPGVGASEG---CRKVAHT--SSYAQYLPRFLA--GLASAPGKVVDMCVEHSRHILYVLHDDAQVSVFDLGANGDD-IKAICAVNLLADG----AKYARENRRTRVSCPDERLFQPAVAGSPNPLKVVALSTVSPDESKVVTLVAVTSNGIRFYLTAFSRRYTYSGAGNYGRAKRPSRLEILHIRLPPPAIS---LRDAP-------PYHAK------------------EGMQPGYAPGKSPSAVHVAFHRKGVFLCIE--GRRDQQDQLVGIAHDPISTTALPVQTGLTARKPTIREAVS 1372 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6747.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6747.1.1 >prot_C-tenellus_contig6747.1.1 ID=prot_C-tenellus_contig6747.1.1|Name=mRNA_C-tenellus_contig6747.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=574bp MRANGALAGHGTNNLASPNDPFKVLMDASASLVQQLRRDELVPELGKQLSback to top mRNA from alignment at C-tenellus_contig6747:107..3577- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6747.1.1 ID=mRNA_C-tenellus_contig6747.1.1|Name=mRNA_C-tenellus_contig6747.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3471bp|location=Sequence derived from alignment at C-tenellus_contig6747:107..3577- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6747:107..3577- >mRNA_C-tenellus_contig6747.1.1 ID=mRNA_C-tenellus_contig6747.1.1|Name=mRNA_C-tenellus_contig6747.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1722bp|location=Sequence derived from alignment at C-tenellus_contig6747:107..3577- (Choristocarpus tenellus KU2346)back to top |