mRNA_C-tenellus_contig1163.8.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A6H5JJ25_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ25_9PHAE) HSP 1 Score: 220 bits (561), Expect = 6.160e-64 Identity = 105/133 (78.95%), Postives = 123/133 (92.48%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 VC+YG TG+GKSSLLMA L ELVT++GR+ MNG+V+YASQRAWIQNATVRDNILFGC +D RY+MVLEACAL+ DL+IL+ GD TEIGEKG+NLSGGQQQRVSLARAVY+D+DI+LLDDVLS+VDAHVGKH+ Sbjct: 758 VCVYGATGAGKSSLLMACLQELVTVEGRSLMNGSVSYASQRAWIQNATVRDNILFGCAFDPRRYDMVLEACALQSDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADSDIVLLDDVLSAVDAHVGKHI 890
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: D7G0B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B6_ECTSI) HSP 1 Score: 220 bits (561), Expect = 6.280e-64 Identity = 105/133 (78.95%), Postives = 123/133 (92.48%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 VC+YG TG+GKSSLLMA L ELVT++GR+ MNG+V+YASQRAWIQNATVRDNILFGC +D RY+MVLEACAL+ DL+IL+ GD TEIGEKG+NLSGGQQQRVSLARAVY+D+DI+LLDDVLS+VDAHVGKH+ Sbjct: 732 VCVYGATGAGKSSLLMACLQELVTVEGRSLMNGSVSYASQRAWIQNATVRDNILFGCAFDPRRYDMVLEACALESDLEILDSGDQTEIGEKGVNLSGGQQQRVSLARAVYADSDIVLLDDVLSAVDAHVGKHI 864
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A7S3XN05_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN05_HETAK) HSP 1 Score: 197 bits (501), Expect = 1.980e-61 Identity = 97/133 (72.93%), Postives = 114/133 (85.71%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 V +YGPTG GKSSLLMALL E+ G ++ GTVAYA+Q+AWIQNATVR+NILFG P DE RY + ACAL+ DL++LEGGDLTEIGEKG+NLSGGQQQRV+LARAVY+DAD+ LLDDVLS+VDAHVG+HL Sbjct: 33 VVVYGPTGCGKSSLLMALLGEIGRRAGEVAVVGTVAYAAQQAWIQNATVRENILFGRPPDEVRYRAAVGACALRRDLRLLEGGDLTEIGEKGVNLSGGQQQRVALARAVYADADVYLLDDVLSAVDAHVGEHL 165
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A6H5K4L0_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4L0_9PHAE) HSP 1 Score: 206 bits (523), Expect = 8.230e-59 Identity = 100/139 (71.94%), Postives = 116/139 (83.45%), Query Frame = 1 Query: 1 VKLFSKVCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 VK VC+YGPTG GKSSLL++LL E+ ++G +NGTVAYA+QRAWIQNAT+RDN+LFG PYD ERY VL ACAL DL +LE GD TEIGEKGINLSGGQQQRVSLARAVY+ AD+ LLDDVLS+VDAHVG+H+ Sbjct: 740 VKPGELVCVYGPTGCGKSSLLLSLLGEVRRVEGTVEINGTVAYAAQRAWIQNATLRDNVLFGSPYDPERYARVLSACALTADLDLLEAGDQTEIGEKGINLSGGQQQRVSLARAVYAQADVYLLDDVLSAVDAHVGEHI 878
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A0B1TE87_OESDE (ABC transporter, ATP-binding protein n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1TE87_OESDE) HSP 1 Score: 187 bits (476), Expect = 9.870e-59 Identity = 91/133 (68.42%), Postives = 105/133 (78.95%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 + + G GSGKSS+L ALL E+ ++GR M G VAY Q WIQN TVRDNILFG PYD+ RYN VL ACALKPDL++L GDLTEIGEKGINLSGGQ+ R+SLARAVY D D+ LLDD LS+VDAHVGKH+ Sbjct: 17 IAVVGKVGSGKSSVLSALLGEMGKLRGRIGMRGRVAYVPQIPWIQNMTVRDNILFGKPYDKRRYNQVLAACALKPDLRMLTNGDLTEIGEKGINLSGGQKARISLARAVYQDFDVYLLDDPLSAVDAHVGKHI 149
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: Q4SX22_TETNG (Chromosome undetermined SCAF13133, whole genome shotgun sequence (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SX22_TETNG) HSP 1 Score: 186 bits (472), Expect = 1.050e-57 Identity = 90/135 (66.67%), Postives = 111/135 (82.22%), Query Frame = 1 Query: 13 SKVCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 S + + G G GKSSL+ ALL E+ ++G S+ G+VAY Q+AWIQNAT+RDNILFG PY+E++Y VLEACAL DL++L GGD+TEIGEKGINLSGGQ+QRVSLARA+YSDAD+ LLDD LS+VDAHV KH+ Sbjct: 34 SLLAVVGHVGCGKSSLISALLGEMEKLEGEVSIRGSVAYVPQQAWIQNATLRDNILFGEPYNEQKYCCVLEACALTADLEVLPGGDMTEIGEKGINLSGGQRQRVSLARALYSDADVYLLDDPLSAVDAHVSKHI 168
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A8D8CBT2_CULPI (Canalicular multispecific organic anion transporter 2 (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8CBT2_CULPI) HSP 1 Score: 185 bits (469), Expect = 1.690e-56 Identity = 90/131 (68.70%), Postives = 107/131 (81.68%), Query Frame = 1 Query: 25 IYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 I G GSGKSS+L A L E+ + GR + GT+AY SQ+AWIQNAT+RDNILFG P D +RY ++ ACALKPDL++L GGD TEIGEKGINLSGGQ+QRVSLARAVY+DADI LDD LS+VD+HVGKH+ Sbjct: 85 IVGTVGSGKSSILSAFLGEMDKLCGRVNTVGTIAYVSQQAWIQNATLRDNILFGKPMDSKRYQKIIAACALKPDLEMLPGGDQTEIGEKGINLSGGQKQRVSLARAVYNDADIYFLDDPLSAVDSHVGKHI 215
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A3P6TRR4_CYLGO (ABC transporter domain-containing protein (Fragment) n=1 Tax=Cylicostephanus goldi TaxID=71465 RepID=A0A3P6TRR4_CYLGO) HSP 1 Score: 182 bits (462), Expect = 2.770e-56 Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKH 414 + + G GSGKSSLL ALL E+ ++GR M+G VAY Q WIQN TVRDNILFG PYD+ RYN VL ACALK DLKIL GD+TEIGEKGINLSGGQ+ R+SLARAVY D D+ LLDD LS+VDA VG+H Sbjct: 38 IAVVGKVGSGKSSLLSALLGEMGKLRGRIGMHGKVAYVPQLPWIQNMTVRDNILFGKPYDKRRYNQVLSACALKQDLKILTNGDMTEIGEKGINLSGGQKARISLARAVYQDFDVYLLDDPLSAVDALVGRH 169
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A8D0KNM1_9SAUR (ABC-type glutathione-S-conjugate transporter n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0KNM1_9SAUR) HSP 1 Score: 195 bits (496), Expect = 3.540e-55 Identity = 92/133 (69.17%), Postives = 113/133 (84.96%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 + + GP GSGKSSL+ A+L E+ IKG ++ G++AY Q+AWIQNAT++DNILFG P+DE RY V++ACAL PDLK+L GGDLTEIGEKGINLSGGQ+QRVSLARAVYS+ADI LLDD LS+VDAHVG+H+ Sbjct: 625 LAVVGPVGSGKSSLVSAILGEMENIKGHINIQGSIAYVPQQAWIQNATLKDNILFGSPFDETRYQQVIKACALLPDLKLLPGGDLTEIGEKGINLSGGQKQRVSLARAVYSNADIYLLDDPLSAVDAHVGRHI 757
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Match: A0A8D8KFL0_CULPI (Canalicular multispecific organic anion transporter 2 (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8KFL0_CULPI) HSP 1 Score: 183 bits (465), Expect = 4.820e-55 Identity = 89/133 (66.92%), Postives = 108/133 (81.20%), Query Frame = 1 Query: 19 VCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIQNATVRDNILFGCPYDEERYNMVLEACALKPDLKILEGGDLTEIGEKGINLSGGQQQRVSLARAVYSDADILLLDDVLSSVDAHVGKHL 417 V I G GSGKSS+L A L E+ + GR + G +AY SQ+AWIQNAT++DNILFG P D +RY+ V+ ACALKPD+++L GGD TEIGEKGINLSGGQ+QRVSLARAVY+DADI LDD LS+VD+HVGKH+ Sbjct: 161 VAIVGTVGSGKSSVLSAFLGEMDKVSGRVNTVGRIAYVSQQAWIQNATLQDNILFGKPMDAKRYHKVIAACALKPDIEMLPGGDQTEIGEKGINLSGGQKQRVSLARAVYNDADIYFLDDPLSAVDSHVGKHI 293 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1163.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1163.8.1 >prot_C-tenellus_contig1163.8.1 ID=prot_C-tenellus_contig1163.8.1|Name=mRNA_C-tenellus_contig1163.8.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=139bp VKLFSKVCIYGPTGSGKSSLLMALLNELVTIKGRASMNGTVAYASQRAWIback to top mRNA from alignment at C-tenellus_contig1163:10460..14577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1163.8.1 ID=mRNA_C-tenellus_contig1163.8.1|Name=mRNA_C-tenellus_contig1163.8.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4118bp|location=Sequence derived from alignment at C-tenellus_contig1163:10460..14577+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1163:10460..14577+ >mRNA_C-tenellus_contig1163.8.1 ID=mRNA_C-tenellus_contig1163.8.1|Name=mRNA_C-tenellus_contig1163.8.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=417bp|location=Sequence derived from alignment at C-tenellus_contig1163:10460..14577+ (Choristocarpus tenellus KU2346)back to top |